| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158315473
Identifier: 158315473
GI number: 158315473
Start: 4355142
End: 4355951
Strand: Reverse
Name: 158315473
Synonym: Franean1_3678
Alternate gene names: NA
Gene position: 4355951-4355142 (Counterclockwise)
Preceding gene: 158315474
Following gene: 158315463
Centisome position: 48.5
GC content: 77.04
Gene sequence:
>810_bases ATGGCACAGGCACGTTCCCGCGGGGCAGTGGCTGAGGTCGGCATCATCGGGGCGGGAGTGCACGGCGCGAGCGCCGCGTT CCACCTGGCCCGGGCCGCGCACGACAGCATCGCGTTCCTCGCGGAGTTCGCCGAGCACACCGACGGCGGAGACGCCGGCT TCGTCCGCACCGGCGGGCTGTACCTGCACGGCCCGGACATCGACGTCGGCGCGGGCGACGGCCCCGGCCCCGGCGGCACG GGCGGGAACGTCGCGGTGGCCGTGCGGGAGGAGCAGGCCGGGTACGCCGATCCCTACCGGACGACCTGGGGCTTCGTCAC CGCGGCCCGGGCGCGCGGCGCGGTGGTCCACGCCGACACCCGGGTCGTCCGGATCACCGAGACTCCCGGGCAGGTCGAGC TCACCACCGTGGACGGCACGACGCACCGGGTCCAGCGCCTGCTGCTCGCCGCCGGTCCCTGGACGGCGCCCCTGGCCGCC CAGCTCCGCGTCCCGCTGCCGCTACATGCCGAACGGCACGTGGTCGCGCTCCTCGGCCCCGTCTCCGGCAGCGGCCCCAC CTCGACCGCCGGTGCCACGTCCGGCGGCGCCGGCTCCGCCCGCCGCGGCGCGGCGCCCCCGGACATCCCCGACCCCGACA CCGGGGTGATCATCGACGTGGCGGGCGGGTACTACGCGGCGCCGCAGCCCGACGGCGGCTGGATGCTCGGCGGCCTCGAG CCCACCCCGCCGGTCGACTTCGACCCCGGCCGGTTCACCGCCGGTGATCAGCTGTCCGCCGGCTTCGGCACCGCCCGCAT TCTCGGGTAA
Upstream 100 bases:
>100_bases GTTCGACCTGCTCGGACGGCTGGTCAACATGCGTGCCACCGGGCCCAAGCCCCGGGCCACCAACGGTTAGCACGGGCCGA AACCGGCGAGAGGACTGACG
Downstream 100 bases:
>100_bases GCCCGGTCAGCCCTCCAGGAGGGTGACGACCGCGAAGCTCAGGACCAGTCCGAGGATGACGGCCCGGATCGGCAGCTGGG CCCGCTCCACCCGGTCCTGG
Product: FAD dependent oxidoreductase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 269; Mature: 268
Protein sequence:
>269_residues MAQARSRGAVAEVGIIGAGVHGASAAFHLARAAHDSIAFLAEFAEHTDGGDAGFVRTGGLYLHGPDIDVGAGDGPGPGGT GGNVAVAVREEQAGYADPYRTTWGFVTAARARGAVVHADTRVVRITETPGQVELTTVDGTTHRVQRLLLAAGPWTAPLAA QLRVPLPLHAERHVVALLGPVSGSGPTSTAGATSGGAGSARRGAAPPDIPDPDTGVIIDVAGGYYAAPQPDGGWMLGGLE PTPPVDFDPGRFTAGDQLSAGFGTARILG
Sequences:
>Translated_269_residues MAQARSRGAVAEVGIIGAGVHGASAAFHLARAAHDSIAFLAEFAEHTDGGDAGFVRTGGLYLHGPDIDVGAGDGPGPGGT GGNVAVAVREEQAGYADPYRTTWGFVTAARARGAVVHADTRVVRITETPGQVELTTVDGTTHRVQRLLLAAGPWTAPLAA QLRVPLPLHAERHVVALLGPVSGSGPTSTAGATSGGAGSARRGAAPPDIPDPDTGVIIDVAGGYYAAPQPDGGWMLGGLE PTPPVDFDPGRFTAGDQLSAGFGTARILG >Mature_268_residues AQARSRGAVAEVGIIGAGVHGASAAFHLARAAHDSIAFLAEFAEHTDGGDAGFVRTGGLYLHGPDIDVGAGDGPGPGGTG GNVAVAVREEQAGYADPYRTTWGFVTAARARGAVVHADTRVVRITETPGQVELTTVDGTTHRVQRLLLAAGPWTAPLAAQ LRVPLPLHAERHVVALLGPVSGSGPTSTAGATSGGAGSARRGAAPPDIPDPDTGVIIDVAGGYYAAPQPDGGWMLGGLEP TPPVDFDPGRFTAGDQLSAGFGTARILG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26984; Mature: 26853
Theoretical pI: Translated: 5.77; Mature: 5.77
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 0.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.4 %Met (Mature Protein) 0.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAQARSRGAVAEVGIIGAGVHGASAAFHLARAAHDSIAFLAEFAEHTDGGDAGFVRTGGL CCCCCCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCE YLHGPDIDVGAGDGPGPGGTGGNVAVAVREEQAGYADPYRTTWGFVTAARARGAVVHADT EEECCCEECCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCHHHHEEEHHHCCEEEECCC RVVRITETPGQVELTTVDGTTHRVQRLLLAAGPWTAPLAAQLRVPLPLHAERHVVALLGP EEEEEECCCCEEEEEEECCCHHHHHHHHHHCCCCCCCCCEEEECCCCCCCCCEEEEEEEC VSGSGPTSTAGATSGGAGSARRGAAPPDIPDPDTGVIIDVAGGYYAAPQPDGGWMLGGLE CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCEEECCCCCCCEEECCCC PTPPVDFDPGRFTAGDQLSAGFGTARILG CCCCCCCCCCCCCCCCCCCCCCCEEEECC >Mature Secondary Structure AQARSRGAVAEVGIIGAGVHGASAAFHLARAAHDSIAFLAEFAEHTDGGDAGFVRTGGL CCCCCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCE YLHGPDIDVGAGDGPGPGGTGGNVAVAVREEQAGYADPYRTTWGFVTAARARGAVVHADT EEECCCEECCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCHHHHEEEHHHCCEEEECCC RVVRITETPGQVELTTVDGTTHRVQRLLLAAGPWTAPLAAQLRVPLPLHAERHVVALLGP EEEEEECCCCEEEEEEECCCHHHHHHHHHHCCCCCCCCCEEEECCCCCCCCCEEEEEEEC VSGSGPTSTAGATSGGAGSARRGAAPPDIPDPDTGVIIDVAGGYYAAPQPDGGWMLGGLE CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCEEECCCCCCCEEECCCC PTPPVDFDPGRFTAGDQLSAGFGTARILG CCCCCCCCCCCCCCCCCCCCCCCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA