| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is corA [H]
Identifier: 158315463
GI number: 158315463
Start: 4344408
End: 4345322
Strand: Reverse
Name: corA [H]
Synonym: Franean1_3668
Alternate gene names: 158315463
Gene position: 4345322-4344408 (Counterclockwise)
Preceding gene: 158315473
Following gene: 158315462
Centisome position: 48.38
GC content: 70.6
Gene sequence:
>915_bases ATGGCGGGCCGACGCAGCTGGCATGCTCGCGCTGTGACGGAACCGCCCCCGCCGCAGTGCCCCACCCGGACCCGGCTCTA CCGCGCCGGGTCGGTGGCGGACAAGGACGAGTTCGACGTCGACGCGCTGATCACCAACTGGGACCTGAACGCGGGCCTCG TCTCCGGCGGCAACCAGGTCGCGGTGCTCGCCCACGGGCTGCTCGACGCGGTGGTCGACGGCCACTACCTGGCCGTCCAG CAGCTCGACGACGCGATCGAGGATCTGCAGGACTGTCTGTTCCAGCCGCGCCCCGGCAGCGACGTCCGCCGCCGGGGCTA CGAACTGAGCGTGCGGCTGGCGCGCCTGCGCCGCGTCGTCGCCCCGATGCAGGACGTCGTCGCCCGGCTGGTGCGCAGCG ACAGCCAGCTGGTGGACGAGACCCTGGCCCCGTACTTCCACGATGTGGCCGACCATTCCCTGCGGGCAGCCGAAACCATC GATGCCGGCCGCGACCGCATCAACAGCATTGTCGAGACACAGCTCAACGAGCAGAGCGCCCAGCTCAACGAGATCACCAA GAAACTGGCCGCCTGGGCCGCGATCATCGCCGTCCCGACCGCGGTCACCGGTTTCTACGGCCAGAACGTCCGTACCCGGG CTTCGGGGGCCACGGCGGCTTCATCGCGAGCTGCCTCGTCATCATCGTCCTCGCCGGCGGCGTCTGGTTCGTGCTGCGCC ACAGGGCTACCCCGTAGGGCTCGTCCAGGGTCGCGGAGTCGGTCCCGAACACCCTGTCGAAGGCCGACGGGGCCACCTCG AGGTACTCGTCCTGATCGGCCATGCCGGCCAGAACGACGTCATCGGTCGCCGCGGCGTCCGCCCGGCCCTGTTGGACCGC GACGAGGCAGTCTGCGGCGCGCGGGAGCTCGATGA
Upstream 100 bases:
>100_bases GCGGCGTCGGGTGCTGCGCGGAGACCTGCTTCGGCATAACCACACCCTTTCCCAGCGACACCGATCTAACAACCACGGAC GCCCCCGATCAGCGCGGCGG
Downstream 100 bases:
>100_bases CCGTCAGTCCGGGAATCGGTGGCCGGGACGGCGTGGCCGCCGGCGCCCCGGCGGCCGCCTCGCGCTGAGAGCAGGCCCGG GTCCGGAGCACGTAGCATCC
Product: Mg2 transporter protein CorA family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 304; Mature: 303
Protein sequence:
>304_residues MAGRRSWHARAVTEPPPPQCPTRTRLYRAGSVADKDEFDVDALITNWDLNAGLVSGGNQVAVLAHGLLDAVVDGHYLAVQ QLDDAIEDLQDCLFQPRPGSDVRRRGYELSVRLARLRRVVAPMQDVVARLVRSDSQLVDETLAPYFHDVADHSLRAAETI DAGRDRINSIVETQLNEQSAQLNEITKKLAAWAAIIAVPTAVTGFYGQNVRTRASGATAASSRAASSSSSSPAASGSCCA TGLPRRARPGSRSRSRTPCRRPTGPPRGTRPDRPCRPERRHRSPRRPPGPVGPRRGSLRRAGAR
Sequences:
>Translated_304_residues MAGRRSWHARAVTEPPPPQCPTRTRLYRAGSVADKDEFDVDALITNWDLNAGLVSGGNQVAVLAHGLLDAVVDGHYLAVQ QLDDAIEDLQDCLFQPRPGSDVRRRGYELSVRLARLRRVVAPMQDVVARLVRSDSQLVDETLAPYFHDVADHSLRAAETI DAGRDRINSIVETQLNEQSAQLNEITKKLAAWAAIIAVPTAVTGFYGQNVRTRASGATAASSRAASSSSSSPAASGSCCA TGLPRRARPGSRSRSRTPCRRPTGPPRGTRPDRPCRPERRHRSPRRPPGPVGPRRGSLRRAGAR >Mature_303_residues AGRRSWHARAVTEPPPPQCPTRTRLYRAGSVADKDEFDVDALITNWDLNAGLVSGGNQVAVLAHGLLDAVVDGHYLAVQQ LDDAIEDLQDCLFQPRPGSDVRRRGYELSVRLARLRRVVAPMQDVVARLVRSDSQLVDETLAPYFHDVADHSLRAAETID AGRDRINSIVETQLNEQSAQLNEITKKLAAWAAIIAVPTAVTGFYGQNVRTRASGATAASSRAASSSSSSPAASGSCCAT GLPRRARPGSRSRSRTPCRRPTGPPRGTRPDRPCRPERRHRSPRRPPGPVGPRRGSLRRAGAR
Specific function: Mediates influx of magnesium ions [H]
COG id: COG0598
COG function: function code P; Mg2+ and Co2+ transporters
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the CorA metal ion transporter (MIT) (TC 1.A.35) family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004488 - InterPro: IPR002523 [H]
Pfam domain/function: PF01544 CorA [H]
EC number: NA
Molecular weight: Translated: 32996; Mature: 32865
Theoretical pI: Translated: 11.35; Mature: 11.35
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 0.3 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAGRRSWHARAVTEPPPPQCPTRTRLYRAGSVADKDEFDVDALITNWDLNAGLVSGGNQV CCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCHHHEEECCCCCCCEECCCCEE AVLAHGLLDAVVDGHYLAVQQLDDAIEDLQDCLFQPRPGSDVRRRGYELSVRLARLRRVV HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCHHHHHHHHHHHHHH APMQDVVARLVRSDSQLVDETLAPYFHDVADHSLRAAETIDAGRDRINSIVETQLNEQSA HHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QLNEITKKLAAWAAIIAVPTAVTGFYGQNVRTRASGATAASSRAASSSSSSPAASGSCCA HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCHHHHHHHCCCCCCCCCCCCCHHH TGLPRRARPGSRSRSRTPCRRPTGPPRGTRPDRPCRPERRHRSPRRPPGPVGPRRGSLRR CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCC AGAR CCCC >Mature Secondary Structure AGRRSWHARAVTEPPPPQCPTRTRLYRAGSVADKDEFDVDALITNWDLNAGLVSGGNQV CCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCHHHEEECCCCCCCEECCCCEE AVLAHGLLDAVVDGHYLAVQQLDDAIEDLQDCLFQPRPGSDVRRRGYELSVRLARLRRVV HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCHHHHHHHHHHHHHH APMQDVVARLVRSDSQLVDETLAPYFHDVADHSLRAAETIDAGRDRINSIVETQLNEQSA HHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QLNEITKKLAAWAAIIAVPTAVTGFYGQNVRTRASGATAASSRAASSSSSSPAASGSCCA HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCHHHHHHHCCCCCCCCCCCCCHHH TGLPRRARPGSRSRSRTPCRRPTGPPRGTRPDRPCRPERRHRSPRRPPGPVGPRRGSLRR CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCC AGAR CCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 10360571 [H]