| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
Click here to switch to the map view.
The map label for this gene is 158315406
Identifier: 158315406
GI number: 158315406
Start: 4273555
End: 4274217
Strand: Reverse
Name: 158315406
Synonym: Franean1_3609
Alternate gene names: NA
Gene position: 4274217-4273555 (Counterclockwise)
Preceding gene: 158315407
Following gene: 158315403
Centisome position: 47.59
GC content: 68.78
Gene sequence:
>663_bases ATGCAAAAAGACGAAGTCTGGCGGGCCATCGATACCCAGCGGCTACGGGTCGCGGTCCTGCTGGAAAAACTCACCGACGA CGAGTGGCGCTCACCCTCGCTGTGCGACGGCTGGACGGTGCGCGATGTCGCGGCCCATCTGACAATGCAACAGACAGGGC TGGGTGGGGCGCTTCGCATGGCCGCCCGGTCACCAGGCGGGATGAAGCGGGTGATCCGCTGCTCGGCGTGCCTGCGGGCG GCCGCGCCGACCGAACAGATGATCGCAGGGATCCGCGGAATGGTCGGTTCGCGGAAACACAACGTGGGCGTCACCTACAG GGAAACCCTTATCGACATCCTCGTGCACGGCCTGGACATCGCCGTTCCCCTCGATCGACCCCTCGAGATACCCCTCGACG CCGCGGCGGTCGCCGCCGACCGGGTCTGGTCCGTTGTCTTCCCGACGTTCGGCTACCCCTTCTTTCCCCGGAAGCGGCTC AGAGGGCTGCGGCTCACCGCGTCCGACGCGGACTGGGCCGCCGGCGAGGGGGCACCGGTCGACGGCCCGATGGACGCGAT CCTGCTGCTGCTCACCGGCCGCGTCGCCGCGCTGTCACGGCTGTCCGGCGATGGTGTGCCCGCGCTCCAGGCAAGGCTCG CGTCCACTCAGGAGCCGGGATGA
Upstream 100 bases:
>100_bases TGGCGGGCCCAGTCGGTTCGCCTTATCTTCCTGCGCCGACGCATAGTCACGGCTGGGAAAATTCATCACGCATAAATTCA TCACGCATCAAGGACGCACC
Downstream 100 bases:
>100_bases CAACGGGAGCCGCGTCGGAGTCCGCGACGGATGGATCGAATCCGGCGCTGACCAGCTGCTGGCGGACCGCATGTGGAGGC GCATCAACCGTCGTGATGGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 220; Mature: 220
Protein sequence:
>220_residues MQKDEVWRAIDTQRLRVAVLLEKLTDDEWRSPSLCDGWTVRDVAAHLTMQQTGLGGALRMAARSPGGMKRVIRCSACLRA AAPTEQMIAGIRGMVGSRKHNVGVTYRETLIDILVHGLDIAVPLDRPLEIPLDAAAVAADRVWSVVFPTFGYPFFPRKRL RGLRLTASDADWAAGEGAPVDGPMDAILLLLTGRVAALSRLSGDGVPALQARLASTQEPG
Sequences:
>Translated_220_residues MQKDEVWRAIDTQRLRVAVLLEKLTDDEWRSPSLCDGWTVRDVAAHLTMQQTGLGGALRMAARSPGGMKRVIRCSACLRA AAPTEQMIAGIRGMVGSRKHNVGVTYRETLIDILVHGLDIAVPLDRPLEIPLDAAAVAADRVWSVVFPTFGYPFFPRKRL RGLRLTASDADWAAGEGAPVDGPMDAILLLLTGRVAALSRLSGDGVPALQARLASTQEPG >Mature_220_residues MQKDEVWRAIDTQRLRVAVLLEKLTDDEWRSPSLCDGWTVRDVAAHLTMQQTGLGGALRMAARSPGGMKRVIRCSACLRA AAPTEQMIAGIRGMVGSRKHNVGVTYRETLIDILVHGLDIAVPLDRPLEIPLDAAAVAADRVWSVVFPTFGYPFFPRKRL RGLRLTASDADWAAGEGAPVDGPMDAILLLLTGRVAALSRLSGDGVPALQARLASTQEPG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23760; Mature: 23760
Theoretical pI: Translated: 8.90; Mature: 8.90
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQKDEVWRAIDTQRLRVAVLLEKLTDDEWRSPSLCDGWTVRDVAAHLTMQQTGLGGALRM CCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHH AARSPGGMKRVIRCSACLRAAAPTEQMIAGIRGMVGSRKHNVGVTYRETLIDILVHGLDI HHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCE AVPLDRPLEIPLDAAAVAADRVWSVVFPTFGYPFFPRKRLRGLRLTASDADWAAGEGAPV EECCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCEEECCCCCCCCCCCCCC DGPMDAILLLLTGRVAALSRLSGDGVPALQARLASTQEPG CCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCC >Mature Secondary Structure MQKDEVWRAIDTQRLRVAVLLEKLTDDEWRSPSLCDGWTVRDVAAHLTMQQTGLGGALRM CCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHH AARSPGGMKRVIRCSACLRAAAPTEQMIAGIRGMVGSRKHNVGVTYRETLIDILVHGLDI HHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCE AVPLDRPLEIPLDAAAVAADRVWSVVFPTFGYPFFPRKRLRGLRLTASDADWAAGEGAPV EECCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCEEECCCCCCCCCCCCCC DGPMDAILLLLTGRVAALSRLSGDGVPALQARLASTQEPG CCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA