| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158315375
Identifier: 158315375
GI number: 158315375
Start: 4238181
End: 4238555
Strand: Reverse
Name: 158315375
Synonym: Franean1_3577
Alternate gene names: NA
Gene position: 4238555-4238181 (Counterclockwise)
Preceding gene: 158315378
Following gene: 158315374
Centisome position: 47.19
GC content: 62.4
Gene sequence:
>375_bases GTGACAGCCCAACCGGGCGGCGATGGCACTGGTCCGTTCGCCGTCCCAGCTAGCCACGATCATCTTCGCCCGCATGGTCC AGTCACCGGGAGCATGCCGCGCCCCGGCCAGCTTCCGGACCTCCTCCGCGTCCGCGGGAGAGCGGGCATACAACAACTTC GGCATGAAAGACCGCCTCCCGACCAGCATCCCACCGGCGGAAAAACGATCTACAGCCGCAATGAGGAACGTTGCATTAGC CAGGTCAGACGCCGACTACGCAACGCGGTGGACCTAACGCACCACAATAAGAACCAGATGATCTTGGTTCAGGGCCCTGA AATCACCATCCGTCCGGTCGCCGCACGACTGCTGACCAGGTGCGATGCAGAATGA
Upstream 100 bases:
>100_bases CGCTTTGACCGCGGCAAGTTTCCGCCGCCGGTGAGCAACCCACATTCGCTGCTCGGCGACGGGGCCATCCTCGCGGTGCA ATGGCCAGCCCTGCCCGCAT
Downstream 100 bases:
>100_bases GGGCCGAAACTGGGACATCATCCAATGGTTCGAACGAATGTTCCGCAGACCTGGCGGTTCCTGAGAGCACGGTCACACTC GTGACCGTCATCGTAGGGAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 124; Mature: 123
Protein sequence:
>124_residues MTAQPGGDGTGPFAVPASHDHLRPHGPVTGSMPRPGQLPDLLRVRGRAGIQQLRHERPPPDQHPTGGKTIYSRNEERCIS QVRRRLRNAVDLTHHNKNQMILVQGPEITIRPVAARLLTRCDAE
Sequences:
>Translated_124_residues MTAQPGGDGTGPFAVPASHDHLRPHGPVTGSMPRPGQLPDLLRVRGRAGIQQLRHERPPPDQHPTGGKTIYSRNEERCIS QVRRRLRNAVDLTHHNKNQMILVQGPEITIRPVAARLLTRCDAE >Mature_123_residues TAQPGGDGTGPFAVPASHDHLRPHGPVTGSMPRPGQLPDLLRVRGRAGIQQLRHERPPPDQHPTGGKTIYSRNEERCISQ VRRRLRNAVDLTHHNKNQMILVQGPEITIRPVAARLLTRCDAE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13736; Mature: 13605
Theoretical pI: Translated: 11.48; Mature: 11.48
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTAQPGGDGTGPFAVPASHDHLRPHGPVTGSMPRPGQLPDLLRVRGRAGIQQLRHERPPP CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCC DQHPTGGKTIYSRNEERCISQVRRRLRNAVDLTHHNKNQMILVQGPEITIRPVAARLLTR CCCCCCCCEECCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCEEEHHHHHHHHHH CDAE CCCC >Mature Secondary Structure TAQPGGDGTGPFAVPASHDHLRPHGPVTGSMPRPGQLPDLLRVRGRAGIQQLRHERPPP CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCC DQHPTGGKTIYSRNEERCISQVRRRLRNAVDLTHHNKNQMILVQGPEITIRPVAARLLTR CCCCCCCCEECCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCEEEHHHHHHHHHH CDAE CCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA