| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158315363
Identifier: 158315363
GI number: 158315363
Start: 4228510
End: 4229319
Strand: Direct
Name: 158315363
Synonym: Franean1_3565
Alternate gene names: NA
Gene position: 4228510-4229319 (Clockwise)
Preceding gene: 158315362
Following gene: 158315364
Centisome position: 47.08
GC content: 71.36
Gene sequence:
>810_bases GTGCCGGAGGTGGTCCTGATCAACACGACAAGCGGAACCCCGCTGAACACCCGCGTGGCCAATGCTCTGGGCGCCAAGGA CTCGTCGGTCCGGCTTCAGGCGGCCCTGGCGGTCGGCTCGAACCCCGACCCCGGCCTCCTGGAGACGCTCGTCGAGCGGT GCGCGGTCGAGCCGGACTTCTTCGTGCGAGACATGCTGTCCTGGGCGCTGACCCGCTTCTCGCCGCGGATCACCCTGCCC CGGATCCGCCAGGAACTCGACTCCGAGCGCACTCAGGCCCGCAGCCAGGCGTTGCACACGCTCAGCAAGATCGGCGACAG GGGCGCGTGGGCCTGGATCACGCGTGACATGCTGCGCGACGCCGACGACGAGGTCGCGCGGACCGCGTGGCGCGTCGCGG TCGCCCTCGTACCCGAGGACGAGAAGAAGGACCTGGTCGACGACCTGGTTGTGCAGCTCGGCCGCGGCGACCGCAGTGTG CAGCTGAGCCTGAGCCGGGCACTCGTCGACCTCGGCGACGTGATCGAGCCCGCCCTGGAGAAGGCCGCGGCGAATCCCGA CCCGGCTGTGGCCGCGCATGCCCGTGCCACCGCGTTGCTCCTGCGGGACCCGGAGACCGGTTTCAACGCGGCCATCGATG AGGCGAGGCGGGTCATCGCACTCGGCCCGGAACGAGCCGCTGCTCCCGCCGCAGCCGCGGCGGGAGTCGCCGAGCCTTCG AAGGCTGCCTGCGTCGCGGCGATCGGCGAGCCCACGGAGACGACCGAATCGGCGGGGGCTGTGGATGCGGTGGAGGCCGT GGATTGCTGA
Upstream 100 bases:
>100_bases CGCCAAGCGTCACCCACCATGCCGGTGTACCCGGGTCAGGCGATCATGTGATCCGTCGGTCACGGGCTTGACCTTGACAT GGTGATAGGGCTTCCACTGG
Downstream 100 bases:
>100_bases TCGGCGACGTGTCCCGCCACTCGGGGGTGAGCACCCGGATGCTTCGGTACTACGACGTCCTCGGCCTGGTGCGACCGACC GGTCGCACCAGCGGCGGCTA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 269; Mature: 268
Protein sequence:
>269_residues MPEVVLINTTSGTPLNTRVANALGAKDSSVRLQAALAVGSNPDPGLLETLVERCAVEPDFFVRDMLSWALTRFSPRITLP RIRQELDSERTQARSQALHTLSKIGDRGAWAWITRDMLRDADDEVARTAWRVAVALVPEDEKKDLVDDLVVQLGRGDRSV QLSLSRALVDLGDVIEPALEKAAANPDPAVAAHARATALLLRDPETGFNAAIDEARRVIALGPERAAAPAAAAAGVAEPS KAACVAAIGEPTETTESAGAVDAVEAVDC
Sequences:
>Translated_269_residues MPEVVLINTTSGTPLNTRVANALGAKDSSVRLQAALAVGSNPDPGLLETLVERCAVEPDFFVRDMLSWALTRFSPRITLP RIRQELDSERTQARSQALHTLSKIGDRGAWAWITRDMLRDADDEVARTAWRVAVALVPEDEKKDLVDDLVVQLGRGDRSV QLSLSRALVDLGDVIEPALEKAAANPDPAVAAHARATALLLRDPETGFNAAIDEARRVIALGPERAAAPAAAAAGVAEPS KAACVAAIGEPTETTESAGAVDAVEAVDC >Mature_268_residues PEVVLINTTSGTPLNTRVANALGAKDSSVRLQAALAVGSNPDPGLLETLVERCAVEPDFFVRDMLSWALTRFSPRITLPR IRQELDSERTQARSQALHTLSKIGDRGAWAWITRDMLRDADDEVARTAWRVAVALVPEDEKKDLVDDLVVQLGRGDRSVQ LSLSRALVDLGDVIEPALEKAAANPDPAVAAHARATALLLRDPETGFNAAIDEARRVIALGPERAAAPAAAAAGVAEPSK AACVAAIGEPTETTESAGAVDAVEAVDC
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28466; Mature: 28335
Theoretical pI: Translated: 4.50; Mature: 4.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPEVVLINTTSGTPLNTRVANALGAKDSSVRLQAALAVGSNPDPGLLETLVERCAVEPDF CCCEEEEECCCCCCCHHHHHHHHCCCCCCEEEEEEEEECCCCCCHHHHHHHHHHCCCCCH FVRDMLSWALTRFSPRITLPRIRQELDSERTQARSQALHTLSKIGDRGAWAWITRDMLRD HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHC ADDEVARTAWRVAVALVPEDEKKDLVDDLVVQLGRGDRSVQLSLSRALVDLGDVIEPALE CHHHHHHHHHHHHEEECCCCHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHHH KAAANPDPAVAAHARATALLLRDPETGFNAAIDEARRVIALGPERAAAPAAAAAGVAEPS HHCCCCCCHHHHHHHHEEEEEECCCCCHHHHHHHCCCEEEECCCHHHCCHHHHHCCCCCC KAACVAAIGEPTETTESAGAVDAVEAVDC CCEEEEECCCCCCCCCCCCCHHHHHHCCC >Mature Secondary Structure PEVVLINTTSGTPLNTRVANALGAKDSSVRLQAALAVGSNPDPGLLETLVERCAVEPDF CCEEEEECCCCCCCHHHHHHHHCCCCCCEEEEEEEEECCCCCCHHHHHHHHHHCCCCCH FVRDMLSWALTRFSPRITLPRIRQELDSERTQARSQALHTLSKIGDRGAWAWITRDMLRD HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHC ADDEVARTAWRVAVALVPEDEKKDLVDDLVVQLGRGDRSVQLSLSRALVDLGDVIEPALE CHHHHHHHHHHHHEEECCCCHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHHH KAAANPDPAVAAHARATALLLRDPETGFNAAIDEARRVIALGPERAAAPAAAAAGVAEPS HHCCCCCCHHHHHHHHEEEEEECCCCCHHHHHHHCCCEEEECCCHHHCCHHHHHCCCCCC KAACVAAIGEPTETTESAGAVDAVEAVDC CCEEEEECCCCCCCCCCCCCHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA