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The map label for this gene is yvrB [H]

Identifier: 158315341

GI number: 158315341

Start: 4202819

End: 4203913

Strand: Direct

Name: yvrB [H]

Synonym: Franean1_3542

Alternate gene names: 158315341

Gene position: 4202819-4203913 (Clockwise)

Preceding gene: 158315340

Following gene: 158315342

Centisome position: 46.79

GC content: 76.26

Gene sequence:

>1095_bases
TTGACCGCGACCGTCCAGGCCCCGCCGGCGATCCCCGCGATCGCCGGCAGGGGCCGGTCGTCCCGCCGCCTGCTGGTGCT
CGCGGGGCTGGCCGTGGGTGTGGCCGTGCTCTTCCTGCTCGCGCTCGCCGTGGGCTCGGTCGCCGTCCCCCTCGACGAGA
CGCTGCGGGTGCTGTTCGGCGCCGAGCCCCGGGACCCCCGCTGGTCGGTGGTGGTCGGCCAGATCCGGCTGCCACGAGCC
CTCACCGCGGCCCTCGCCGGCGCGGCGCTCGGCGTCGCCGGCCTGCAGATGCAGACCCTGTTCCGCAACCCGCTCGCCGA
CCCGTACTCGCTCGGCGTCAGCTCGGGCGCGAGCCTCGGCGTCGCCCTGGTCGTCGCCGGGATCGGCGGGTCGGGCGGCA
CCTTCACCGCGCAGGTCGCCGGCAGCGGCCGGTTCGGCGTGGTCATCGCCGGCGCGGCCGGCGCCGCGATCGTGCTCGCC
GCCGTGCTCCTCCTGGCGAACTGGGTCCGCTCCGTCGTCACCCTGCTGGTCATCGGCGTCATCCTCGGCAGCGCCGTCAG
CTCGGTGGTCAACCTGCTGCTGACCTGGACGGCCCCGGAACGCGCCATCCAGTACTGGACCTGGTCGCTGGGCAGCTTCG
CCGGGACCTCCACCGGCGACCTGGCCGTCTTCGCCCCGGCCGTCGGCGCCGGCCTGCTCGTCGCGCTGGCCTCGGTGAAG
CCGCTCAACGCCCTGCTGCTCGGCGAGAACTACGCCCGCACGCTCGGCCTGCGGCTGCGCCGGGTCCGGGCGGTCACCCT
GCTCGGCGCGTCCCTGCTCGCCGGGGCGGTCACCGCGTTCTGCGGGCCGGTCGCGTTTCTGGGGATCGCCGTCCCGCACG
TCGCCCGTCGGCTGCTCGGCACCGCCGACCACCGGGTCCTCGTTCCCGCGACCCTGCTCACCGGCGCCGGGCTGGCCCTG
GCCTGCTCGATCGCGGCGCAGCTGCCCGGCACCGGCATCGTCCTGCCCATCAACGTCATCACCGCCCTCGTCGGCGCGCC
GATCGTGATCGCCGTCCTGCTGCGGGCGCGGGCGAGCGTCGCGGGGGTGGCCTGA

Upstream 100 bases:

>100_bases
GCGGCGTCACCCGTCCCGACCTGGTCCTCGGCGACCTCGTCGCGATCCTGCACCCGGACGCGCTGCCGGGTCACGACTTC
GCCTTCTACAAGAAGATCAC

Downstream 100 bases:

>100_bases
TGCCGGGCACCGAAACGGGCGGGCTGCGGATGGAGGGGCTCGCGGCCGGCTACCGACCGGCCGGCTACCGACGGCGGCGC
GCACTCCGTGAGGTGCTGAC

Product: transport system permease

Products: ADP; phosphate; cob(I)alamin [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 364; Mature: 363

Protein sequence:

>364_residues
MTATVQAPPAIPAIAGRGRSSRRLLVLAGLAVGVAVLFLLALAVGSVAVPLDETLRVLFGAEPRDPRWSVVVGQIRLPRA
LTAALAGAALGVAGLQMQTLFRNPLADPYSLGVSSGASLGVALVVAGIGGSGGTFTAQVAGSGRFGVVIAGAAGAAIVLA
AVLLLANWVRSVVTLLVIGVILGSAVSSVVNLLLTWTAPERAIQYWTWSLGSFAGTSTGDLAVFAPAVGAGLLVALASVK
PLNALLLGENYARTLGLRLRRVRAVTLLGASLLAGAVTAFCGPVAFLGIAVPHVARRLLGTADHRVLVPATLLTGAGLAL
ACSIAAQLPGTGIVLPINVITALVGAPIVIAVLLRARASVAGVA

Sequences:

>Translated_364_residues
MTATVQAPPAIPAIAGRGRSSRRLLVLAGLAVGVAVLFLLALAVGSVAVPLDETLRVLFGAEPRDPRWSVVVGQIRLPRA
LTAALAGAALGVAGLQMQTLFRNPLADPYSLGVSSGASLGVALVVAGIGGSGGTFTAQVAGSGRFGVVIAGAAGAAIVLA
AVLLLANWVRSVVTLLVIGVILGSAVSSVVNLLLTWTAPERAIQYWTWSLGSFAGTSTGDLAVFAPAVGAGLLVALASVK
PLNALLLGENYARTLGLRLRRVRAVTLLGASLLAGAVTAFCGPVAFLGIAVPHVARRLLGTADHRVLVPATLLTGAGLAL
ACSIAAQLPGTGIVLPINVITALVGAPIVIAVLLRARASVAGVA
>Mature_363_residues
TATVQAPPAIPAIAGRGRSSRRLLVLAGLAVGVAVLFLLALAVGSVAVPLDETLRVLFGAEPRDPRWSVVVGQIRLPRAL
TAALAGAALGVAGLQMQTLFRNPLADPYSLGVSSGASLGVALVVAGIGGSGGTFTAQVAGSGRFGVVIAGAAGAAIVLAA
VLLLANWVRSVVTLLVIGVILGSAVSSVVNLLLTWTAPERAIQYWTWSLGSFAGTSTGDLAVFAPAVGAGLLVALASVKP
LNALLLGENYARTLGLRLRRVRAVTLLGASLLAGAVTAFCGPVAFLGIAVPHVARRLLGTADHRVLVPATLLTGAGLALA
CSIAAQLPGTGIVLPINVITALVGAPIVIAVLLRARASVAGVA

Specific function: Probably part of an ABC transporter complex. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG0609

COG function: function code P; ABC-type Fe3+-siderophore transport system, permease component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily [H]

Homologues:

Organism=Escherichia coli, GI1788004, Length=297, Percent_Identity=38.047138047138, Blast_Score=125, Evalue=5e-30,
Organism=Escherichia coli, GI1790740, Length=319, Percent_Identity=31.3479623824451, Blast_Score=102, Evalue=4e-23,
Organism=Escherichia coli, GI1790741, Length=330, Percent_Identity=32.4242424242424, Blast_Score=99, Evalue=5e-22,
Organism=Escherichia coli, GI1786805, Length=319, Percent_Identity=35.1097178683386, Blast_Score=95, Evalue=6e-21,
Organism=Escherichia coli, GI1786804, Length=287, Percent_Identity=32.7526132404181, Blast_Score=95, Evalue=7e-21,
Organism=Escherichia coli, GI1786347, Length=291, Percent_Identity=30.5841924398625, Blast_Score=69, Evalue=5e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000522 [H]

Pfam domain/function: PF01032 FecCD [H]

EC number: NA

Molecular weight: Translated: 36274; Mature: 36142

Theoretical pI: Translated: 12.23; Mature: 12.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
0.5 %Met     (Translated Protein)
1.1 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
0.3 %Met     (Mature Protein)
0.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTATVQAPPAIPAIAGRGRSSRRLLVLAGLAVGVAVLFLLALAVGSVAVPLDETLRVLFG
CCCCCCCCCCCCHHHCCCCCCCEEEEEHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHC
AEPRDPRWSVVVGQIRLPRALTAALAGAALGVAGLQMQTLFRNPLADPYSLGVSSGASLG
CCCCCCCEEEEEECEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHCCCCCCCCCC
VALVVAGIGGSGGTFTAQVAGSGRFGVVIAGAAGAAIVLAAVLLLANWVRSVVTLLVIGV
EEEEEEECCCCCCEEEEEEECCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
ILGSAVSSVVNLLLTWTAPERAIQYWTWSLGSFAGTSTGDLAVFAPAVGAGLLVALASVK
HHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCEEEEHHHHHHHHHHHHHCCC
PLNALLLGENYARTLGLRLRRVRAVTLLGASLLAGAVTAFCGPVAFLGIAVPHVARRLLG
CHHHEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
TADHRVLVPATLLTGAGLALACSIAAQLPGTGIVLPINVITALVGAPIVIAVLLRARASV
CCCCEEEEEHHHHHCCCHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHH
AGVA
CCCC
>Mature Secondary Structure 
TATVQAPPAIPAIAGRGRSSRRLLVLAGLAVGVAVLFLLALAVGSVAVPLDETLRVLFG
CCCCCCCCCCCHHHCCCCCCCEEEEEHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHC
AEPRDPRWSVVVGQIRLPRALTAALAGAALGVAGLQMQTLFRNPLADPYSLGVSSGASLG
CCCCCCCEEEEEECEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHCCCCCCCCCC
VALVVAGIGGSGGTFTAQVAGSGRFGVVIAGAAGAAIVLAAVLLLANWVRSVVTLLVIGV
EEEEEEECCCCCCEEEEEEECCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
ILGSAVSSVVNLLLTWTAPERAIQYWTWSLGSFAGTSTGDLAVFAPAVGAGLLVALASVK
HHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCEEEEHHHHHHHHHHHHHCCC
PLNALLLGENYARTLGLRLRRVRAVTLLGASLLAGAVTAFCGPVAFLGIAVPHVARRLLG
CHHHEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
TADHRVLVPATLLTGAGLALACSIAAQLPGTGIVLPINVITALVGAPIVIAVLLRARASV
CCCCEEEEEHHHHHCCCHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHH
AGVA
CCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; cob(I)alamin [Periplasm]; H2O [C]

Specific reaction: ATP + cob(I)alamin [Periplasm] + H2O = ADP + phosphate + cob(I)alamin [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9639930; 9384377 [H]