| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158315333
Identifier: 158315333
GI number: 158315333
Start: 4193607
End: 4194275
Strand: Direct
Name: 158315333
Synonym: Franean1_3534
Alternate gene names: NA
Gene position: 4193607-4194275 (Clockwise)
Preceding gene: 158315332
Following gene: 158315340
Centisome position: 46.69
GC content: 68.76
Gene sequence:
>669_bases ATGACGACTGTGGGATTCGTCGGAAGCGGATACATTGGCAGTACCATCGCGCGGCTCGCCATCGAGGCCGGGCACCAGGT CGTGCTCAGCAACTCGCGCGGTCCCGAAACGCTCGCGGACACGGCCGCAGAACTGGGGCCGCGGGCGTCCGCGGCGACGA GCGGGGAGGCCGCGGCGGCCGGTGACATCGTCGTGGTCACGGTGCCGGTCAAGGCGTTCCCCAACTTGCCCGCCGTGCCA CTGGCCGGGAAGACGGTCATCGACACGTGCAACTACGGCCCCGAGCGTGACGGGCACATCCCCGAGCTCGACGGCAAGTC GCTCACCTCGAGCGAACTGCTGCTGCGGTACATCCCGGACGCCATGGTCGTGAAAGCGTTCAACAACATCTTCTTCAAGC ACCTGCTGTCACTCGCCCGCCCGGCGGGGGCGGCCGACCGCTCGTACCTGCCGATCGCCGGGGACTCCGCGCCGGCAAAG GCGGCGGTGACCGAATTCATCGAATCCATCGGGTACAGCGTCGTGGACGCGGGACCGCTGGCCGATAGCTGGCGGCAGGC GACGGGCACGCCGGTGTGGGGGACCCCATACGGGCCGTTCTCGAACGAGAAGGGCCAGTCGGTCGACGAGGACGCCATCC ACGCGGCACTGGCCACCGCAACGCGGTAA
Upstream 100 bases:
>100_bases CAACGGCCATTACTTCTCCGCCAGCTGACGGCAGGCACCCGAATCGCAACGAGTCCGGCAAATGACAAGGATACGGCTCT TCTGGAGGGACGCTGAGAAT
Downstream 100 bases:
>100_bases CCGCGAGTTGGCGCGGGCCGCGGTGTGGTCCGGCCGTGTTATGGCCCCGTCCGGCAGTCTGTTGCCCAATTCGGCTATGC GGCGAGGCTGAAGTCGAGTC
Product: NADP oxidoreductase coenzyme F420-dependent
Products: NA
Alternate protein names: Oxidoreductase; NADp Oxidoreductase Co; Truncated NADP Oxidoreductase Co; NADP Oxidoreductase; 3-Hydroxyisobutyrate Dehydrogenase Protein
Number of amino acids: Translated: 222; Mature: 221
Protein sequence:
>222_residues MTTVGFVGSGYIGSTIARLAIEAGHQVVLSNSRGPETLADTAAELGPRASAATSGEAAAAGDIVVVTVPVKAFPNLPAVP LAGKTVIDTCNYGPERDGHIPELDGKSLTSSELLLRYIPDAMVVKAFNNIFFKHLLSLARPAGAADRSYLPIAGDSAPAK AAVTEFIESIGYSVVDAGPLADSWRQATGTPVWGTPYGPFSNEKGQSVDEDAIHAALATATR
Sequences:
>Translated_222_residues MTTVGFVGSGYIGSTIARLAIEAGHQVVLSNSRGPETLADTAAELGPRASAATSGEAAAAGDIVVVTVPVKAFPNLPAVP LAGKTVIDTCNYGPERDGHIPELDGKSLTSSELLLRYIPDAMVVKAFNNIFFKHLLSLARPAGAADRSYLPIAGDSAPAK AAVTEFIESIGYSVVDAGPLADSWRQATGTPVWGTPYGPFSNEKGQSVDEDAIHAALATATR >Mature_221_residues TTVGFVGSGYIGSTIARLAIEAGHQVVLSNSRGPETLADTAAELGPRASAATSGEAAAAGDIVVVTVPVKAFPNLPAVPL AGKTVIDTCNYGPERDGHIPELDGKSLTSSELLLRYIPDAMVVKAFNNIFFKHLLSLARPAGAADRSYLPIAGDSAPAKA AVTEFIESIGYSVVDAGPLADSWRQATGTPVWGTPYGPFSNEKGQSVDEDAIHAALATATR
Specific function: Unknown
COG id: COG2085
COG function: function code R; Predicted dinucleotide-binding enzymes
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI56549145, Length=201, Percent_Identity=30.8457711442786, Blast_Score=67, Evalue=9e-12, Organism=Homo sapiens, GI59853425, Length=201, Percent_Identity=30.8457711442786, Blast_Score=67, Evalue=1e-11, Organism=Homo sapiens, GI56549147, Length=201, Percent_Identity=30.8457711442786, Blast_Score=67, Evalue=1e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22891; Mature: 22760
Theoretical pI: Translated: 4.82; Mature: 4.82
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 0.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTVGFVGSGYIGSTIARLAIEAGHQVVLSNSRGPETLADTAAELGPRASAATSGEAAAA CCCCCCCCCCHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHCCCCCCCCCCCCCCC GDIVVVTVPVKAFPNLPAVPLAGKTVIDTCNYGPERDGHIPELDGKSLTSSELLLRYIPD CCEEEEEECHHHCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCH AMVVKAFNNIFFKHLLSLARPAGAADRSYLPIAGDSAPAKAAVTEFIESIGYSVVDAGPL HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCEECCCCC ADSWRQATGTPVWGTPYGPFSNEKGQSVDEDAIHAALATATR HHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCC >Mature Secondary Structure TTVGFVGSGYIGSTIARLAIEAGHQVVLSNSRGPETLADTAAELGPRASAATSGEAAAA CCCCCCCCCHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHCCCCCCCCCCCCCCC GDIVVVTVPVKAFPNLPAVPLAGKTVIDTCNYGPERDGHIPELDGKSLTSSELLLRYIPD CCEEEEEECHHHCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCH AMVVKAFNNIFFKHLLSLARPAGAADRSYLPIAGDSAPAKAAVTEFIESIGYSVVDAGPL HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCEECCCCC ADSWRQATGTPVWGTPYGPFSNEKGQSVDEDAIHAALATATR HHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA