| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
Click here to switch to the map view.
The map label for this gene is 158315332
Identifier: 158315332
GI number: 158315332
Start: 4192599
End: 4193534
Strand: Direct
Name: 158315332
Synonym: Franean1_3533
Alternate gene names: NA
Gene position: 4192599-4193534 (Clockwise)
Preceding gene: 158315331
Following gene: 158315333
Centisome position: 46.68
GC content: 69.12
Gene sequence:
>936_bases GTGCGCGTTTTCGTCACTGGCGGGACCGGCCATTCCGGTTTGTACATCATCCCCGAGCTCATCGCCGCCGGGCACGAGGT CACCGGCCTGGCCCGGTCGGACACGGCTGCGGCGGCGGTGTCCGCGCTCGGCGCGAAGGTGCGGCGCGGCGACCTCGAGG ATCTCGACGGGCTCAAGGAGGCGGCCGCGGATTCCGACGGCGTCATCCACGTCGCGCACAGGCAAGACCTGCTTCCGTCC GGCGGGATCGACGCCGTGGCCGCCGCGGAGCTCCCGATCACGCTCGCGTACGGCGAGGCACTCGCGGAAACCGGAAAGCC GCTGGTCGCGGCGGGGAGCATTGGCTCGCCCGGGAACCTGGGCCGGCCGGCCACCGAGGAGGACCCGGCCCTTCCCGGCG GCGATGAGTACAAGGGTACCCTGCGGGTTCGTAACGTCGTGGAAACCGCCGTAGTCGGCCTCGCCGAGCGGGGAGTGCGG TCTTCGGTCGTGCGGATTGCCAACATCGCGCACAGCACGACCGATCGTGCCGGCTTCCTCGTGCAGCTGATCGCGCTCGC GAAGGAGAAGGGCTTCGTCGGCTACCCCGGAGACGGCGCGAACCTGTGGAACGCCGTGCACGTCCGCGATGTCGCCTCCT TGTTCCGCTTGGCGCTGGAGAAGGGGCCGGCTGGCAAATATTGGCACGCGGTTGGGGACGGGGCCATCCCGTTCCGCGAG ATCGCCGAGGCCATTGGCAGCCGTCTGGGCCTGCCCGCCGTGAGCGTTCCCGCGGACGTAATGATGGTGCCGGGATACTT TGGGTTCCTCGCGAACATAGTCACGCAGAACTACCCGGCGTCCAACCTCATCACCCGCCGGACCCTCGGCTGGGAACCCG CTCAGCCCGGCCTGCTCGCCGATTTGGACAACGGCCATTACTTCTCCGCCAGCTGA
Upstream 100 bases:
>100_bases TCCGTCAAGCACACCAACTTCTCCCTCGGCGTCAGCATTCTCAGCTGAGCGCACCCACACCACCACTTCTCGCGCCACAT CATTCACAAGGAGCAGTAGC
Downstream 100 bases:
>100_bases CGGCAGGCACCCGAATCGCAACGAGTCCGGCAAATGACAAGGATACGGCTCTTCTGGAGGGACGCTGAGAATATGACGAC TGTGGGATTCGTCGGAAGCG
Product: NAD-dependent epimerase/dehydratase
Products: NA
Alternate protein names: Oxidoreductase; Nucleoside-Diphosphate-Sugar Epimerase; NAD Dependent Epimerase/Dehydratase; Epimerase/Dehydratase; NAD Dependent Epimerase/Dehydratase Family Protein; Nucleoside-Diphosphate-Sugar Epimerase Dehydratase Protein; 3-Beta Hydroxysteroid Dehydrogenase/Isomerase; UDP-Glucose 4-Epimerase; Polysaccharide Synthesis Protein; Dyhydroflavanol-4-Reductase; NAD-Dependent Epimerase/Dehydratase Family Protein; Dehydratase; Nucleoside-Diphosphate-Sugar Epimerases; Signal Peptide; Dyhydroflavanol-4-Reductas; NAD Dependent Epimerase/Dehydratase Family; Male Sterility Protein-Like Protein; 3-Beta Hydroxysteroid Dehydrogenase
Number of amino acids: Translated: 311; Mature: 311
Protein sequence:
>311_residues MRVFVTGGTGHSGLYIIPELIAAGHEVTGLARSDTAAAAVSALGAKVRRGDLEDLDGLKEAAADSDGVIHVAHRQDLLPS GGIDAVAAAELPITLAYGEALAETGKPLVAAGSIGSPGNLGRPATEEDPALPGGDEYKGTLRVRNVVETAVVGLAERGVR SSVVRIANIAHSTTDRAGFLVQLIALAKEKGFVGYPGDGANLWNAVHVRDVASLFRLALEKGPAGKYWHAVGDGAIPFRE IAEAIGSRLGLPAVSVPADVMMVPGYFGFLANIVTQNYPASNLITRRTLGWEPAQPGLLADLDNGHYFSAS
Sequences:
>Translated_311_residues MRVFVTGGTGHSGLYIIPELIAAGHEVTGLARSDTAAAAVSALGAKVRRGDLEDLDGLKEAAADSDGVIHVAHRQDLLPS GGIDAVAAAELPITLAYGEALAETGKPLVAAGSIGSPGNLGRPATEEDPALPGGDEYKGTLRVRNVVETAVVGLAERGVR SSVVRIANIAHSTTDRAGFLVQLIALAKEKGFVGYPGDGANLWNAVHVRDVASLFRLALEKGPAGKYWHAVGDGAIPFRE IAEAIGSRLGLPAVSVPADVMMVPGYFGFLANIVTQNYPASNLITRRTLGWEPAQPGLLADLDNGHYFSAS >Mature_311_residues MRVFVTGGTGHSGLYIIPELIAAGHEVTGLARSDTAAAAVSALGAKVRRGDLEDLDGLKEAAADSDGVIHVAHRQDLLPS GGIDAVAAAELPITLAYGEALAETGKPLVAAGSIGSPGNLGRPATEEDPALPGGDEYKGTLRVRNVVETAVVGLAERGVR SSVVRIANIAHSTTDRAGFLVQLIALAKEKGFVGYPGDGANLWNAVHVRDVASLFRLALEKGPAGKYWHAVGDGAIPFRE IAEAIGSRLGLPAVSVPADVMMVPGYFGFLANIVTQNYPASNLITRRTLGWEPAQPGLLADLDNGHYFSAS
Specific function: Unknown
COG id: COG0451
COG function: function code MG; Nucleoside-diphosphate-sugar epimerases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Saccharomyces cerevisiae, GI6322972, Length=305, Percent_Identity=41.3114754098361, Blast_Score=207, Evalue=2e-54,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32198; Mature: 32198
Theoretical pI: Translated: 5.59; Mature: 5.59
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRVFVTGGTGHSGLYIIPELIAAGHEVTGLARSDTAAAAVSALGAKVRRGDLEDLDGLKE CEEEEECCCCCCCCEEHHHHHHCCCHHCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHH AAADSDGVIHVAHRQDLLPSGGIDAVAAAELPITLAYGEALAETGKPLVAAGSIGSPGNL HHCCCCCEEEEECCCCCCCCCCCCEEECCCCCEEEEHHHHHHHCCCCEEEECCCCCCCCC GRPATEEDPALPGGDEYKGTLRVRNVVETAVVGLAERGVRSSVVRIANIAHSTTDRAGFL CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH VQLIALAKEKGFVGYPGDGANLWNAVHVRDVASLFRLALEKGPAGKYWHAVGDGAIPFRE HHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCHHH IAEAIGSRLGLPAVSVPADVMMVPGYFGFLANIVTQNYPASNLITRRTLGWEPAQPGLLA HHHHHHHHCCCCCCCCCCCEEECCHHHHHHHHHHHCCCCCHHHHHHHCCCCCCCCCCEEE DLDNGHYFSAS ECCCCEEECCC >Mature Secondary Structure MRVFVTGGTGHSGLYIIPELIAAGHEVTGLARSDTAAAAVSALGAKVRRGDLEDLDGLKE CEEEEECCCCCCCCEEHHHHHHCCCHHCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHH AAADSDGVIHVAHRQDLLPSGGIDAVAAAELPITLAYGEALAETGKPLVAAGSIGSPGNL HHCCCCCEEEEECCCCCCCCCCCCEEECCCCCEEEEHHHHHHHCCCCEEEECCCCCCCCC GRPATEEDPALPGGDEYKGTLRVRNVVETAVVGLAERGVRSSVVRIANIAHSTTDRAGFL CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH VQLIALAKEKGFVGYPGDGANLWNAVHVRDVASLFRLALEKGPAGKYWHAVGDGAIPFRE HHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCHHH IAEAIGSRLGLPAVSVPADVMMVPGYFGFLANIVTQNYPASNLITRRTLGWEPAQPGLLA HHHHHHHHCCCCCCCCCCCEEECCHHHHHHHHHHHCCCCCHHHHHHHCCCCCCCCCCEEE DLDNGHYFSAS ECCCCEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA