| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158315312
Identifier: 158315312
GI number: 158315312
Start: 4174246
End: 4175001
Strand: Direct
Name: 158315312
Synonym: Franean1_3513
Alternate gene names: NA
Gene position: 4174246-4175001 (Clockwise)
Preceding gene: 158315310
Following gene: 158315319
Centisome position: 46.47
GC content: 72.09
Gene sequence:
>756_bases GTGAACGGGCCGCACACGCACGGAAAGCCGACCAGGAGCAGGCGTTCGACTCGACCGGGACATTCGAGCGTGCCGGGGCA GGTGAGCTGGCACCGGTCGTCGGACGGGCCCGGAGCACTGGACCGGCAAGAGCCGCTGGGCCGGCCTGAGCCGGTTTCCC GCCGGCACGCGGCTCGCTCCCGGGAGGCGTTGCTGCTCGCCAGCGCCGCGCTGACCGCCGCCGGTTTCATCGGGCTAGCC GTGGGAGGCGGTGCCAGTGCCATAGCGGGCGGTCCCCCGGCGGGCATGTCGTCCGGCGGCATGTGGTCGGGCGGTGCCGC TGGTCCGTCCGGGATGTGCCCGGGCCCGTCGCTGACACTGAGCTCGACCCGCCCGGACCCCGGCGCGGGTAACATCTTTC AACAGCTCGTCCTGACCAACACCGGCCCGGCGGCCTGCTGGCTGCAGGGATTCCCCCAGGTGTCCTTCGTCGGAGACAAC GGCCAGCAGGTCGGCGCCCCGGCCGCCCACATCGGCCCGACAGGCCCGGTCGTGTTCCTGAAGCCGGGCGAATCCGCACG GGCAGTCCTGCACACCGTGCAGCCTGGCCTGCAGGTGGGCTGTGACCAGCAGGGAGAGACCGCGCCCGTACGGGCCCTGA AGGTCCACCCGCCGGGATCGATGCACTCGCTGTCGCTTGGCCCGCCGGCGGTCGCCACGGCCTGCACATCAACGGCCATC CACCAGATGGACGTCACCACGGTCATCATCGGCTGA
Upstream 100 bases:
>100_bases CAGAGAAATCTCACCGAGGCTCCGCAACTGGATGCGTATCAGGCACCGCATGAGCATTCCGGCGTCGCGCCGATCCGGGC GCCGGACCGGGGAGGTCGCC
Downstream 100 bases:
>100_bases GCGCACGGCGGGCATGTCTTTCGCCGCCCGGGAGTGGGATCGGTACCACTCCCGGGCGGCGGAACCTTTTTCAATGTCAG CGGAGTGCGTCGACGTCCCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 251; Mature: 251
Protein sequence:
>251_residues MNGPHTHGKPTRSRRSTRPGHSSVPGQVSWHRSSDGPGALDRQEPLGRPEPVSRRHAARSREALLLASAALTAAGFIGLA VGGGASAIAGGPPAGMSSGGMWSGGAAGPSGMCPGPSLTLSSTRPDPGAGNIFQQLVLTNTGPAACWLQGFPQVSFVGDN GQQVGAPAAHIGPTGPVVFLKPGESARAVLHTVQPGLQVGCDQQGETAPVRALKVHPPGSMHSLSLGPPAVATACTSTAI HQMDVTTVIIG
Sequences:
>Translated_251_residues MNGPHTHGKPTRSRRSTRPGHSSVPGQVSWHRSSDGPGALDRQEPLGRPEPVSRRHAARSREALLLASAALTAAGFIGLA VGGGASAIAGGPPAGMSSGGMWSGGAAGPSGMCPGPSLTLSSTRPDPGAGNIFQQLVLTNTGPAACWLQGFPQVSFVGDN GQQVGAPAAHIGPTGPVVFLKPGESARAVLHTVQPGLQVGCDQQGETAPVRALKVHPPGSMHSLSLGPPAVATACTSTAI HQMDVTTVIIG >Mature_251_residues MNGPHTHGKPTRSRRSTRPGHSSVPGQVSWHRSSDGPGALDRQEPLGRPEPVSRRHAARSREALLLASAALTAAGFIGLA VGGGASAIAGGPPAGMSSGGMWSGGAAGPSGMCPGPSLTLSSTRPDPGAGNIFQQLVLTNTGPAACWLQGFPQVSFVGDN GQQVGAPAAHIGPTGPVVFLKPGESARAVLHTVQPGLQVGCDQQGETAPVRALKVHPPGSMHSLSLGPPAVATACTSTAI HQMDVTTVIIG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25157; Mature: 25157
Theoretical pI: Translated: 10.45; Mature: 10.45
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNGPHTHGKPTRSRRSTRPGHSSVPGQVSWHRSSDGPGALDRQEPLGRPEPVSRRHAARS CCCCCCCCCCCCHHCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHH REALLLASAALTAAGFIGLAVGGGASAIAGGPPAGMSSGGMWSGGAAGPSGMCPGPSLTL HHHHHHHHHHHHHHHHHEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEE SSTRPDPGAGNIFQQLVLTNTGPAACWLQGFPQVSFVGDNGQQVGAPAAHIGPTGPVVFL CCCCCCCCHHHHHHHHHHCCCCCHHHHHCCCCCEEEECCCCCCCCCCCCCCCCCCCEEEE KPGESARAVLHTVQPGLQVGCDQQGETAPVRALKVHPPGSMHSLSLGPPAVATACTSTAI CCCCHHHHHHHHHCCCCEECCCCCCCCCCEEEEEECCCCCCCEECCCCCHHHHHHHHHHH HQMDVTTVIIG HEEEEEEEEEC >Mature Secondary Structure MNGPHTHGKPTRSRRSTRPGHSSVPGQVSWHRSSDGPGALDRQEPLGRPEPVSRRHAARS CCCCCCCCCCCCHHCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHH REALLLASAALTAAGFIGLAVGGGASAIAGGPPAGMSSGGMWSGGAAGPSGMCPGPSLTL HHHHHHHHHHHHHHHHHEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEE SSTRPDPGAGNIFQQLVLTNTGPAACWLQGFPQVSFVGDNGQQVGAPAAHIGPTGPVVFL CCCCCCCCHHHHHHHHHHCCCCCHHHHHCCCCCEEEECCCCCCCCCCCCCCCCCCCEEEE KPGESARAVLHTVQPGLQVGCDQQGETAPVRALKVHPPGSMHSLSLGPPAVATACTSTAI CCCCHHHHHHHHHCCCCEECCCCCCCCCCEEEEEECCCCCCCEECCCCCHHHHHHHHHHH HQMDVTTVIIG HEEEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA