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The map label for this gene is embR [H]

Identifier: 158315289

GI number: 158315289

Start: 4148829

End: 4149602

Strand: Direct

Name: embR [H]

Synonym: Franean1_3489

Alternate gene names: 158315289

Gene position: 4148829-4149602 (Clockwise)

Preceding gene: 158315282

Following gene: 158315292

Centisome position: 46.19

GC content: 73.0

Gene sequence:

>774_bases
ATGCGATACGAACTGCTCGGGCCCCTGCGCGTGTCGAACAGCCGGGAGAGCCACCTGTTGAGCGCGCCGAAGATGGAGAC
CACCCTGGCCGTGCTGCTCGTCGGCGCCGGCCGGATCACGACCAAGGACACTCTGGTCATGGAACTGTGGGGAGACCGGC
CGCCCCGCCGGGCGGCGGCCGCCATCCACGTCTACATCTCCCAGCTGCGGAAGTTCCTCGCGGCCGCCGGCGCGGACCCC
ACCCGCACCATCGTCACCAAGCCCGCCGGCTACCTGCTGTGGCTGGACGGCGCCAGCTACGACGTCGTCGAGTTCCAGGA
GGCGATGCGCGACGGGCGGGAGCACCACCTGGCCGGGCGGTGCGAGGAGGCGCTGGCCGCCGCCGAGCTCGCGCTGTCCC
TGGTTCGCGGCCCGGTGCTGGAATCCGCCGTGGAGGGGCCGGTCCTGACCGCCTTCGCCGCCTGGGCCGAGGAGGAGCTC
CTCGCCGCCCTGGAGCTGTCGGTTGAGGCCCGCACGGCGCTCGGCCGGCACCGGGAGGTGATCAGCCTGCTCGGCACGCT
CATCGCCCAGCATCCGCTGCGGGAGTCGCTGTACTCGCAGCTGATGCTCGTCCTCTACCGCTCGGGCCGGCAGGCCGAGG
CACTGGCGGTGTACCGCGACGCCCAGCGGGTGCTGCGGGCCGAGCTGGGGCTGGAGCCCTGCCGCTCACTGCGGCGGCTG
CACCACGCCATCCTCACCTCCGACCGGCTGCTGGACCTGCCCACCGCGAGCTGA

Upstream 100 bases:

>100_bases
TTTACCTACGCAGTTTCACCGATGTGCGCACCGCGTTGCCGCGGGACAGTGAGGCCCTCCCCTTCCCGGACTCGTTTCCT
GCTGCCTGCACGAGGTGTCA

Downstream 100 bases:

>100_bases
CGTGGCGGCGGGTGCCGAGCCGTCCCGTGGTGTCACACGGTGTCACGCGCGGCGCGCGCCGTTGCGCGCCGCGCGCCGGT
CAGCGGATCGGCGGCATCAG

Product: SARP family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 257; Mature: 257

Protein sequence:

>257_residues
MRYELLGPLRVSNSRESHLLSAPKMETTLAVLLVGAGRITTKDTLVMELWGDRPPRRAAAAIHVYISQLRKFLAAAGADP
TRTIVTKPAGYLLWLDGASYDVVEFQEAMRDGREHHLAGRCEEALAAAELALSLVRGPVLESAVEGPVLTAFAAWAEEEL
LAALELSVEARTALGRHREVISLLGTLIAQHPLRESLYSQLMLVLYRSGRQAEALAVYRDAQRVLRAELGLEPCRSLRRL
HHAILTSDRLLDLPTAS

Sequences:

>Translated_257_residues
MRYELLGPLRVSNSRESHLLSAPKMETTLAVLLVGAGRITTKDTLVMELWGDRPPRRAAAAIHVYISQLRKFLAAAGADP
TRTIVTKPAGYLLWLDGASYDVVEFQEAMRDGREHHLAGRCEEALAAAELALSLVRGPVLESAVEGPVLTAFAAWAEEEL
LAALELSVEARTALGRHREVISLLGTLIAQHPLRESLYSQLMLVLYRSGRQAEALAVYRDAQRVLRAELGLEPCRSLRRL
HHAILTSDRLLDLPTAS
>Mature_257_residues
MRYELLGPLRVSNSRESHLLSAPKMETTLAVLLVGAGRITTKDTLVMELWGDRPPRRAAAAIHVYISQLRKFLAAAGADP
TRTIVTKPAGYLLWLDGASYDVVEFQEAMRDGREHHLAGRCEEALAAAELALSLVRGPVLESAVEGPVLTAFAAWAEEEL
LAALELSVEARTALGRHREVISLLGTLIAQHPLRESLYSQLMLVLYRSGRQAEALAVYRDAQRVLRAELGLEPCRSLRRL
HHAILTSDRLLDLPTAS

Specific function: Unknown

COG id: COG3629

COG function: function code T; DNA-binding transcriptional activator of the SARP family

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 FHA domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005158
- InterPro:   IPR000253
- InterPro:   IPR001867
- InterPro:   IPR016032
- InterPro:   IPR008984
- InterPro:   IPR011990
- InterPro:   IPR011991 [H]

Pfam domain/function: PF03704 BTAD; PF00498 FHA; PF00486 Trans_reg_C [H]

EC number: NA

Molecular weight: Translated: 28284; Mature: 28284

Theoretical pI: Translated: 7.28; Mature: 7.28

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRYELLGPLRVSNSRESHLLSAPKMETTLAVLLVGAGRITTKDTLVMELWGDRPPRRAAA
CCCCCCCCEECCCCCHHHHCCCCCHHHHHHHHHHCCCCCCCHHHHHEEECCCCCCHHHHH
AIHVYISQLRKFLAAAGADPTRTIVTKPAGYLLWLDGASYDVVEFQEAMRDGREHHLAGR
HHHHHHHHHHHHHHHCCCCCCCEEEECCCCEEEEECCCCCHHHHHHHHHHCCHHHHHHHH
CEEALAAAELALSLVRGPVLESAVEGPVLTAFAAWAEEELLAALELSVEARTALGRHREV
HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ISLLGTLIAQHPLRESLYSQLMLVLYRSGRQAEALAVYRDAQRVLRAELGLEPCRSLRRL
HHHHHHHHHHCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHH
HHAILTSDRLLDLPTAS
HHHHHCCCCCCCCCCCC
>Mature Secondary Structure
MRYELLGPLRVSNSRESHLLSAPKMETTLAVLLVGAGRITTKDTLVMELWGDRPPRRAAA
CCCCCCCCEECCCCCHHHHCCCCCHHHHHHHHHHCCCCCCCHHHHHEEECCCCCCHHHHH
AIHVYISQLRKFLAAAGADPTRTIVTKPAGYLLWLDGASYDVVEFQEAMRDGREHHLAGR
HHHHHHHHHHHHHHHCCCCCCCEEEECCCCEEEEECCCCCHHHHHHHHHHCCHHHHHHHH
CEEALAAAELALSLVRGPVLESAVEGPVLTAFAAWAEEELLAALELSVEARTALGRHREV
HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ISLLGTLIAQHPLRESLYSQLMLVLYRSGRQAEALAVYRDAQRVLRAELGLEPCRSLRRL
HHHHHHHHHHCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHH
HHAILTSDRLLDLPTAS
HHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12788972 [H]