| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
Click here to switch to the map view.
The map label for this gene is 158315286
Identifier: 158315286
GI number: 158315286
Start: 4143901
End: 4144329
Strand: Reverse
Name: 158315286
Synonym: Franean1_3486
Alternate gene names: NA
Gene position: 4144329-4143901 (Counterclockwise)
Preceding gene: 158315287
Following gene: 158315285
Centisome position: 46.14
GC content: 75.99
Gene sequence:
>429_bases ATGACCCGGACCGCACCAGCCCAGACCGCGCCGGCCGAGAACGCGCCGGAGCCGGATCTGCGGGCGCTGCACCGGGCCGA CCGGCTGGGCGACAACGGCCTGGTCGGGGTGGTGGTGACCAGCCGGGACGGCGCCACGCTGCGCGTCGACGACTTCCTGC TCAGCTGCCGGGTGTTCGCCCGCGGCATCGAGCAGGCGCTGCTGGCGGCGGTGCTGCGCCACGCCCACCGGACCGGCGCC GCCGAGGTCCGCGCCGACTACACCCGCACCGCGAAGAACGGCAAGGTCGCCGACTTCTACCCGCGCGCCGGCTTCGCCGC GGTGAGCGCGGACGACGCCGGTGCCCGCTTCCGCCACGACCTTCGCGACCTGCCCGAGCCGCCGCCGCACGTCCGCCTGA CCGCCCGCTTCGATGAGGACGCACCGTGA
Upstream 100 bases:
>100_bases CCAAGCTCGGCGCGGGTGAGCGGGCGGTCGGCGTCTCCATCGAGTCCAGCAAGTGGATCAAGGCCGGCTTCGCCCTGCAG GGCGGCGGAGGGGAATCCCG
Downstream 100 bases:
>100_bases CCGTGAGAACCGTCGAGGACTTCGTCGCCCTGCTGCGCGACGAGCTCGCCCTGCCCGTCACCGCCGACGACCTCGACCGG GATCTCGACTCCGTGGAGTC
Product: hypothetical protein
Products: NA
Alternate protein names: FkbH Domain Protein; FkbH Domain-Containing Protein; HAD Family Phosphatase FbkH
Number of amino acids: Translated: 142; Mature: 141
Protein sequence:
>142_residues MTRTAPAQTAPAENAPEPDLRALHRADRLGDNGLVGVVVTSRDGATLRVDDFLLSCRVFARGIEQALLAAVLRHAHRTGA AEVRADYTRTAKNGKVADFYPRAGFAAVSADDAGARFRHDLRDLPEPPPHVRLTARFDEDAP
Sequences:
>Translated_142_residues MTRTAPAQTAPAENAPEPDLRALHRADRLGDNGLVGVVVTSRDGATLRVDDFLLSCRVFARGIEQALLAAVLRHAHRTGA AEVRADYTRTAKNGKVADFYPRAGFAAVSADDAGARFRHDLRDLPEPPPHVRLTARFDEDAP >Mature_141_residues TRTAPAQTAPAENAPEPDLRALHRADRLGDNGLVGVVVTSRDGATLRVDDFLLSCRVFARGIEQALLAAVLRHAHRTGAA EVRADYTRTAKNGKVADFYPRAGFAAVSADDAGARFRHDLRDLPEPPPHVRLTARFDEDAP
Specific function: Unknown
COG id: COG3882
COG function: function code Q; Predicted enzyme involved in methoxymalonyl-ACP biosynthesis
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15378; Mature: 15247
Theoretical pI: Translated: 7.73; Mature: 7.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTRTAPAQTAPAENAPEPDLRALHRADRLGDNGLVGVVVTSRDGATLRVDDFLLSCRVFA CCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCEEEEEEECCCCCEEEHHHHHHHHHHHH RGIEQALLAAVLRHAHRTGAAEVRADYTRTAKNGKVADFYPRAGFAAVSADDAGARFRHD HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCEEEECCCCCEEEECCCCCCHHHHHH LRDLPEPPPHVRLTARFDEDAP HHCCCCCCCCEEEEEECCCCCC >Mature Secondary Structure TRTAPAQTAPAENAPEPDLRALHRADRLGDNGLVGVVVTSRDGATLRVDDFLLSCRVFA CCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCEEEEEEECCCCCEEEHHHHHHHHHHHH RGIEQALLAAVLRHAHRTGAAEVRADYTRTAKNGKVADFYPRAGFAAVSADDAGARFRHD HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCEEEECCCCCEEEECCCCCCHHHHHH LRDLPEPPPHVRLTARFDEDAP HHCCCCCCCCEEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA