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The map label for this gene is dppC [H]

Identifier: 158315277

GI number: 158315277

Start: 4134721

End: 4135584

Strand: Reverse

Name: dppC [H]

Synonym: Franean1_3477

Alternate gene names: 158315277

Gene position: 4135584-4134721 (Counterclockwise)

Preceding gene: 158315278

Following gene: 158315276

Centisome position: 46.04

GC content: 73.96

Gene sequence:

>864_bases
ATGAGCGTCCCCACGCTTCGCATCCCGGGCCGGCCGGCGCGGTCGGCCCGGCTGGGCCGGCCGCGCCCGGGTGTGGTGAT
CGCCGCGCTCGTGCTGCTGTTGTTCCTCCTGGCGGCGGTCTGGCCGTCGCTGTTCACCGGCACCGGTCCCACCGACGGGG
ACCTGCTCGCCACCCTGCAGGCGCCGGGCGGCAAGCACTGGTTCGGCACCGACCAGCTCGGCCGGGACGTCTTCGCCCGG
GTCGTGCACGGTACCCGTTACTCGCTGACCATCGGCCTAGCCGCCACCGGCATCGCCGTCGTGATCGCGACCGTCTGGGG
GCTGGCCGCCGCGCTGAGTGGCCGGTTCGTCGACGGGCTGCTCATGCGGACCACCGACGTGATGCTGGCGCTGCCCCCGC
TGCTGCTCGCACTGATCGTCGTGATGATCACCGGCAAGGGCGTGGTCGGCGTCACGCTGGCCGTCGCCGTCAGCGGTGTT
CCCGGGTTCGCCCGGGTGATCCGCGGCCAGGCGCTGGTCGTCCGCCGCTCCGGGTACGTGAGCGCGGCCGTCGGGCTGGG
CGTACGCCGGTGGCGGGTCGCCGCCCGGCACGTGCTGCCGAACACCCTGGCGCCGCTGCTGGTCTTCGCCACCGTCACCC
TCGGCATCGCCATCGCCTCGGCGTCGGCGCTGAGCTACCTCGGCCTTGGCGCCCAGCCGCCCAGCCCCGAGTGGGGGGCG
ATGCTCACCGAGGGCCAGGACTACCTGGGGCAGGCCTGGTGGATCGCGGTGTTCCCCGGCCTGCTGCTGGTCGTCGTGGT
CCTCGCGGTCACCGTGCTCGGCCGCCACGCGCAGGCCAGGTCAGAAGGGCGGGTCTGGTCATGA

Upstream 100 bases:

>100_bases
CGCTGTCGGCGGTGGTGTTCGTCGCCGTCAGCGCCCTGCTGGAACTGCTGTACGCGGTGGTCGACCCGCGGCTGCGCAAG
CGGACGGGGGTGGCCGCGGC

Downstream 100 bases:

>100_bases
CGGCCATCACCGGAGCCGACGACGCTCCCGAACTGCTCTCGCCCCCGGCGGCGGCGCCGGAGTCCCCGCCGGAGTCCCCG
CAGCCGCCGGAGCCGACCGC

Product: binding-protein-dependent transport systems inner membrane component

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 287; Mature: 286

Protein sequence:

>287_residues
MSVPTLRIPGRPARSARLGRPRPGVVIAALVLLLFLLAAVWPSLFTGTGPTDGDLLATLQAPGGKHWFGTDQLGRDVFAR
VVHGTRYSLTIGLAATGIAVVIATVWGLAAALSGRFVDGLLMRTTDVMLALPPLLLALIVVMITGKGVVGVTLAVAVSGV
PGFARVIRGQALVVRRSGYVSAAVGLGVRRWRVAARHVLPNTLAPLLVFATVTLGIAIASASALSYLGLGAQPPSPEWGA
MLTEGQDYLGQAWWIAVFPGLLLVVVVLAVTVLGRHAQARSEGRVWS

Sequences:

>Translated_287_residues
MSVPTLRIPGRPARSARLGRPRPGVVIAALVLLLFLLAAVWPSLFTGTGPTDGDLLATLQAPGGKHWFGTDQLGRDVFAR
VVHGTRYSLTIGLAATGIAVVIATVWGLAAALSGRFVDGLLMRTTDVMLALPPLLLALIVVMITGKGVVGVTLAVAVSGV
PGFARVIRGQALVVRRSGYVSAAVGLGVRRWRVAARHVLPNTLAPLLVFATVTLGIAIASASALSYLGLGAQPPSPEWGA
MLTEGQDYLGQAWWIAVFPGLLLVVVVLAVTVLGRHAQARSEGRVWS
>Mature_286_residues
SVPTLRIPGRPARSARLGRPRPGVVIAALVLLLFLLAAVWPSLFTGTGPTDGDLLATLQAPGGKHWFGTDQLGRDVFARV
VHGTRYSLTIGLAATGIAVVIATVWGLAAALSGRFVDGLLMRTTDVMLALPPLLLALIVVMITGKGVVGVTLAVAVSGVP
GFARVIRGQALVVRRSGYVSAAVGLGVRRWRVAARHVLPNTLAPLLVFATVTLGIAIASASALSYLGLGAQPPSPEWGAM
LTEGQDYLGQAWWIAVFPGLLLVVVVLAVTVLGRHAQARSEGRVWS

Specific function: Part of the binding-protein-dependent transport system for dipeptides; probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG1173

COG function: function code EP; ABC-type dipeptide/oligopeptide/nickel transport systems, permease components

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787054, Length=260, Percent_Identity=41.1538461538462, Blast_Score=187, Evalue=9e-49,
Organism=Escherichia coli, GI1787760, Length=272, Percent_Identity=36.3970588235294, Blast_Score=185, Evalue=2e-48,
Organism=Escherichia coli, GI1789964, Length=209, Percent_Identity=40.1913875598086, Blast_Score=131, Evalue=5e-32,
Organism=Escherichia coli, GI1789889, Length=225, Percent_Identity=32.8888888888889, Blast_Score=120, Evalue=1e-28,
Organism=Escherichia coli, GI1787498, Length=276, Percent_Identity=31.1594202898551, Blast_Score=112, Evalue=4e-26,
Organism=Escherichia coli, GI1787549, Length=214, Percent_Identity=35.0467289719626, Blast_Score=97, Evalue=1e-21,
Organism=Escherichia coli, GI1788505, Length=215, Percent_Identity=30.6976744186047, Blast_Score=89, Evalue=4e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 29919; Mature: 29788

Theoretical pI: Translated: 12.18; Mature: 12.18

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSVPTLRIPGRPARSARLGRPRPGVVIAALVLLLFLLAAVWPSLFTGTGPTDGDLLATLQ
CCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEE
APGGKHWFGTDQLGRDVFARVVHGTRYSLTIGLAATGIAVVIATVWGLAAALSGRFVDGL
CCCCCCCCCCHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LMRTTDVMLALPPLLLALIVVMITGKGVVGVTLAVAVSGVPGFARVIRGQALVVRRSGYV
HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHHCCCEEEEECCCCH
SAAVGLGVRRWRVAARHVLPNTLAPLLVFATVTLGIAIASASALSYLGLGAQPPSPEWGA
HHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
MLTEGQDYLGQAWWIAVFPGLLLVVVVLAVTVLGRHAQARSEGRVWS
CHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
SVPTLRIPGRPARSARLGRPRPGVVIAALVLLLFLLAAVWPSLFTGTGPTDGDLLATLQ
CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEE
APGGKHWFGTDQLGRDVFARVVHGTRYSLTIGLAATGIAVVIATVWGLAAALSGRFVDGL
CCCCCCCCCCHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LMRTTDVMLALPPLLLALIVVMITGKGVVGVTLAVAVSGVPGFARVIRGQALVVRRSGYV
HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHHCCCEEEEECCCCH
SAAVGLGVRRWRVAARHVLPNTLAPLLVFATVTLGIAIASASALSYLGLGAQPPSPEWGA
HHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
MLTEGQDYLGQAWWIAVFPGLLLVVVVLAVTVLGRHAQARSEGRVWS
CHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9680333 [H]