Definition Frankia sp. EAN1pec chromosome, complete genome.
Accession NC_009921
Length 8,982,042

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The map label for this gene is yhbW [C]

Identifier: 158315267

GI number: 158315267

Start: 4097712

End: 4098776

Strand: Reverse

Name: yhbW [C]

Synonym: Franean1_3467

Alternate gene names: 158315267

Gene position: 4098776-4097712 (Counterclockwise)

Preceding gene: 158315271

Following gene: 158315265

Centisome position: 45.63

GC content: 74.93

Gene sequence:

>1065_bases
ATGCGCGTCGGACTGGGATATCTGAACATGGCCCCGGCGGGCGACGCCCCGACCGCCCGGGCCCTCTACGCCGACTTCCT
GCACGACGCCCGGTGGGCGCAGGCCGCGGGCTTCGCCGGCATCTGGGTCACCGAGCACCACTTCTCCACCTACAGCCTGA
CCTCGTCGCCGCTGCTCCTGCTGGCACAGGCGGCGGTCGTCGCGCCCACGCTCCGGCTGGGCACGTCGATCCTGGTGCTG
CCCTTCTGGGACCCGGTGCGGCTGGCCGCCGACCTGCTCACCCTGGACGCGCTGTCCGGTGGGCGGCTCGACGTCGGCAT
CGGCCGCGGGTACCAGCCGCACGAGTTCCACGGGTTCGGCCGGGACCCGGCGGACAGCCGGGCCGCCTTCACCGAGGCGG
TCGACCTCCTCCAGCAGCTGTTCACCGGCCACGACGAGCGGTTCGCGGGCCGCTTCCACCGGATCGACACGCCGGTCACC
CTGCTGCCCCGCCCGACCCAGCGGCCCCACCCGCCGATCTGGACGTCGGCCACCAGCCCGGAGTCGCTGCGCTTCGCCGC
GGACCGGGGCTTCCACTTCATGCTGCCCGCCGGCACGACGTTCCCGCAGGTCGTGGAGCGCCGGCGCTGGATCGAGGAGG
CCGGCGGGCTGCCGGCCGGGCGTGAGTTCCAGGTCAACCGGTTCGTGTACCTGGGCGACGAGGAGGGCCGGGCGGCGGTC
GTCCGGGAGATCGCCCGCCAGTTGCAGACCTCGGCCGCGCTGACGGAGGGGACGGGCCCGGTGGCGGGCGCCGCTCCCGC
TCCCGAGCGGCCGGATCCCGCGATGGAGGAGAAGGCGCGCGAGGTCCTCATCACCGGGTCCGCGTCGGAGGTGCTCGAGC
AGTTCCTGGCCCTGGCCGAGACGGGCATCACCTACGTCATCGCCAGCTTCGCCTTCGGGTATCTCGACCTTCGGGTCAGC
CGGCGCTCCCGGGAGCGGTTCGCCGCCGAGGTGCTGCCCCGTCTCCCGGTGCCGGGGTCGGCCCCGGCCGCGCTGCCGCC
GCCGGCCCTGCCCGCGGCCCGGTGA

Upstream 100 bases:

>100_bases
GGCTTGCCGCGCCCGGCCCCTTCGAGGGGGCGGGCGCCGTCCACCGTGCGCTTTAGCGCGGGACAAGCCGGCCGTCAGAC
TCCGCCGGGACCATCGCGGC

Downstream 100 bases:

>100_bases
GCCGCTACTCGCTCGCCGGGGCCTTCGCCGCCGGGCCCGTGGCGGCGAAGGCGCGCAGGAAGGTCGCGGTCGCGGCCCGC
GCGGTGTGCTGGATCTGGGT

Product: luciferase family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 354; Mature: 354

Protein sequence:

>354_residues
MRVGLGYLNMAPAGDAPTARALYADFLHDARWAQAAGFAGIWVTEHHFSTYSLTSSPLLLLAQAAVVAPTLRLGTSILVL
PFWDPVRLAADLLTLDALSGGRLDVGIGRGYQPHEFHGFGRDPADSRAAFTEAVDLLQQLFTGHDERFAGRFHRIDTPVT
LLPRPTQRPHPPIWTSATSPESLRFAADRGFHFMLPAGTTFPQVVERRRWIEEAGGLPAGREFQVNRFVYLGDEEGRAAV
VREIARQLQTSAALTEGTGPVAGAAPAPERPDPAMEEKAREVLITGSASEVLEQFLALAETGITYVIASFAFGYLDLRVS
RRSRERFAAEVLPRLPVPGSAPAALPPPALPAAR

Sequences:

>Translated_354_residues
MRVGLGYLNMAPAGDAPTARALYADFLHDARWAQAAGFAGIWVTEHHFSTYSLTSSPLLLLAQAAVVAPTLRLGTSILVL
PFWDPVRLAADLLTLDALSGGRLDVGIGRGYQPHEFHGFGRDPADSRAAFTEAVDLLQQLFTGHDERFAGRFHRIDTPVT
LLPRPTQRPHPPIWTSATSPESLRFAADRGFHFMLPAGTTFPQVVERRRWIEEAGGLPAGREFQVNRFVYLGDEEGRAAV
VREIARQLQTSAALTEGTGPVAGAAPAPERPDPAMEEKAREVLITGSASEVLEQFLALAETGITYVIASFAFGYLDLRVS
RRSRERFAAEVLPRLPVPGSAPAALPPPALPAAR
>Mature_354_residues
MRVGLGYLNMAPAGDAPTARALYADFLHDARWAQAAGFAGIWVTEHHFSTYSLTSSPLLLLAQAAVVAPTLRLGTSILVL
PFWDPVRLAADLLTLDALSGGRLDVGIGRGYQPHEFHGFGRDPADSRAAFTEAVDLLQQLFTGHDERFAGRFHRIDTPVT
LLPRPTQRPHPPIWTSATSPESLRFAADRGFHFMLPAGTTFPQVVERRRWIEEAGGLPAGREFQVNRFVYLGDEEGRAAV
VREIARQLQTSAALTEGTGPVAGAAPAPERPDPAMEEKAREVLITGSASEVLEQFLALAETGITYVIASFAFGYLDLRVS
RRSRERFAAEVLPRLPVPGSAPAALPPPALPAAR

Specific function: Unknown

COG id: COG2141

COG function: function code C; Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial luciferase oxidoreductase family [H]

Homologues:

Organism=Escherichia coli, GI1789551, Length=199, Percent_Identity=27.1356783919598, Blast_Score=63, Evalue=4e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011251
- InterPro:   IPR016048 [H]

Pfam domain/function: PF00296 Bac_luciferase [H]

EC number: NA

Molecular weight: Translated: 38372; Mature: 38372

Theoretical pI: Translated: 6.61; Mature: 6.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRVGLGYLNMAPAGDAPTARALYADFLHDARWAQAAGFAGIWVTEHHFSTYSLTSSPLLL
CCCCCCCEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCEEEEECCCHHHH
LAQAAVVAPTLRLGTSILVLPFWDPVRLAADLLTLDALSGGRLDVGIGRGYQPHEFHGFG
HHHHHHHHHHHHHCCEEEEEECCCHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCCCC
RDPADSRAAFTEAVDLLQQLFTGHDERFAGRFHRIDTPVTLLPRPTQRPHPPIWTSATSP
CCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCEEECCCCCCCCCCCCCCCCCCC
ESLRFAADRGFHFMLPAGTTFPQVVERRRWIEEAGGLPAGREFQVNRFVYLGDEEGRAAV
CCEEEECCCCEEEEECCCCCHHHHHHHHHHHHHHCCCCCCCEEEEEEEEEECCCCCHHHH
VREIARQLQTSAALTEGTGPVAGAAPAPERPDPAMEEKAREVLITGSASEVLEQFLALAE
HHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHEEEEECCHHHHHHHHHHHHH
TGITYVIASFAFGYLDLRVSRRSRERFAAEVLPRLPVPGSAPAALPPPALPAAR
HHHHHHHHHHHHHHHHEEHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MRVGLGYLNMAPAGDAPTARALYADFLHDARWAQAAGFAGIWVTEHHFSTYSLTSSPLLL
CCCCCCCEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCEEEEECCCHHHH
LAQAAVVAPTLRLGTSILVLPFWDPVRLAADLLTLDALSGGRLDVGIGRGYQPHEFHGFG
HHHHHHHHHHHHHCCEEEEEECCCHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCCCC
RDPADSRAAFTEAVDLLQQLFTGHDERFAGRFHRIDTPVTLLPRPTQRPHPPIWTSATSP
CCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCEEECCCCCCCCCCCCCCCCCCC
ESLRFAADRGFHFMLPAGTTFPQVVERRRWIEEAGGLPAGREFQVNRFVYLGDEEGRAAV
CCEEEECCCCEEEEECCCCCHHHHHHHHHHHHHHCCCCCCCEEEEEEEEEECCCCCHHHH
VREIARQLQTSAALTEGTGPVAGAAPAPERPDPAMEEKAREVLITGSASEVLEQFLALAE
HHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHEEEEECCHHHHHHHHHHHHH
TGITYVIASFAFGYLDLRVSRRSRERFAAEVLPRLPVPGSAPAALPPPALPAAR
HHHHHHHHHHHHHHHHEEHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9163424; 8796346 [H]