Definition Frankia sp. EAN1pec chromosome, complete genome.
Accession NC_009921
Length 8,982,042

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The map label for this gene is 158315252

Identifier: 158315252

GI number: 158315252

Start: 4082220

End: 4083245

Strand: Direct

Name: 158315252

Synonym: Franean1_3452

Alternate gene names: NA

Gene position: 4082220-4083245 (Clockwise)

Preceding gene: 158315251

Following gene: 158315255

Centisome position: 45.45

GC content: 74.37

Gene sequence:

>1026_bases
TTGGCCACGGCCCGCGCCCTCGAGCAGCTCCCCGCGGTGCGGGCGGCGTTCACCGACGGGACGGTCTCCTACTCGAAGGT
CCGGGCGATCACCCGGATCGCCGACCCGACCACCGAGCGCCTCTGGCTCGAACACGCCCTGCACCGCACCGCAGGCCAGC
TGGAACGCCTCGTCCGCACCCTCCGCCAGACCACCACCGACCCGGACGACCGTGCCAGGACACAGGCGGCCCGGCGGGTC
TCCTGGCGCACGGACGACAACGGCATGCCGCACCTGACCGCGGTCCTGCCTCCCGACGAAGGCACCCAACTCATCACCGC
ACTCGACGCCGCCCGCACCAGCCTCGACACCACCACCGACTCCGGCACCGACGCGGGCCAGCCGCCTCCCGACAGGGAGG
TCGCAGCCGTGCCGCGGGACCGCCGCCGCGACGCCGACGCACTGCTCGACACCCCACAGCCACACCCCCCACAGCCCGGG
CCCGGGTCGCGCGCGGAGATCTCACCCGCGACCGGCCTGTCCCCCACGGTCCTGCGCCGGCTCGGTTGCGACGGGCTGAT
CCGCGCCCTGCTCACCGACACCCACGGCAACCCGCTGCGGCCGGGCCGGCGCCGCCGGCCACCGAACCGGCAGCTGCGGG
ACACAGTCCACGCCCGGGACAGGGGCACCTGCCAGTACCCCGGCTGCGCACACACCCGATGGCTGCACATCCACCATCTC
GTTCCCTGGACCGAGGGCGGCGGCACCGACATCGACAACCTCACCCTCGTCTGCGGCGAACACCACCGCACCCTGCACGA
CGAGGACACCAAGCTCCGCAGAACCACCGCCGGGCGGATCGTCGCCCTGCTCCCCGACGGCCGCACGCCCGACCCGGCGC
CGCCCGCCAATCCGGGGGCCCGACCCGCCGAGGTCCTCACCGAGGCCACTCGGCACGTGGCACCAGACGCGATCGCCACC
CGGAACGGCGGCCCGTTCCACCTCGACGACTCGATCCGCGCACTCCTGCGAGATCACGCCGCGTGA

Upstream 100 bases:

>100_bases
CCGCGACGGTCCGCCCGCCCGCGCGCCGTTCGGGTGTTCTGCGAGTGCGCACTGGCTGTCCTGGCGCTGCGGGATCGGGC
TGCGTGCCGCCCGGGAGCAT

Downstream 100 bases:

>100_bases
ACCACCACCCACCCACCCACCTCATCGGCCCGGGGTGATGCCGAGGGTCCGGGCCACAACGGACAAAGTCGGGCAGGGAT
ATACGTCGAGGCAGGCGGCG

Product: HNH endonuclease

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 341; Mature: 340

Protein sequence:

>341_residues
MATARALEQLPAVRAAFTDGTVSYSKVRAITRIADPTTERLWLEHALHRTAGQLERLVRTLRQTTTDPDDRARTQAARRV
SWRTDDNGMPHLTAVLPPDEGTQLITALDAARTSLDTTTDSGTDAGQPPPDREVAAVPRDRRRDADALLDTPQPHPPQPG
PGSRAEISPATGLSPTVLRRLGCDGLIRALLTDTHGNPLRPGRRRRPPNRQLRDTVHARDRGTCQYPGCAHTRWLHIHHL
VPWTEGGGTDIDNLTLVCGEHHRTLHDEDTKLRRTTAGRIVALLPDGRTPDPAPPANPGARPAEVLTEATRHVAPDAIAT
RNGGPFHLDDSIRALLRDHAA

Sequences:

>Translated_341_residues
MATARALEQLPAVRAAFTDGTVSYSKVRAITRIADPTTERLWLEHALHRTAGQLERLVRTLRQTTTDPDDRARTQAARRV
SWRTDDNGMPHLTAVLPPDEGTQLITALDAARTSLDTTTDSGTDAGQPPPDREVAAVPRDRRRDADALLDTPQPHPPQPG
PGSRAEISPATGLSPTVLRRLGCDGLIRALLTDTHGNPLRPGRRRRPPNRQLRDTVHARDRGTCQYPGCAHTRWLHIHHL
VPWTEGGGTDIDNLTLVCGEHHRTLHDEDTKLRRTTAGRIVALLPDGRTPDPAPPANPGARPAEVLTEATRHVAPDAIAT
RNGGPFHLDDSIRALLRDHAA
>Mature_340_residues
ATARALEQLPAVRAAFTDGTVSYSKVRAITRIADPTTERLWLEHALHRTAGQLERLVRTLRQTTTDPDDRARTQAARRVS
WRTDDNGMPHLTAVLPPDEGTQLITALDAARTSLDTTTDSGTDAGQPPPDREVAAVPRDRRRDADALLDTPQPHPPQPGP
GSRAEISPATGLSPTVLRRLGCDGLIRALLTDTHGNPLRPGRRRRPPNRQLRDTVHARDRGTCQYPGCAHTRWLHIHHLV
PWTEGGGTDIDNLTLVCGEHHRTLHDEDTKLRRTTAGRIVALLPDGRTPDPAPPANPGARPAEVLTEATRHVAPDAIATR
NGGPFHLDDSIRALLRDHAA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 37289; Mature: 37158

Theoretical pI: Translated: 8.70; Mature: 8.70

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
0.3 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MATARALEQLPAVRAAFTDGTVSYSKVRAITRIADPTTERLWLEHALHRTAGQLERLVRT
CCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH
LRQTTTDPDDRARTQAARRVSWRTDDNGMPHLTAVLPPDEGTQLITALDAARTSLDTTTD
HHHHCCCCHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHCCCCCC
SGTDAGQPPPDREVAAVPRDRRRDADALLDTPQPHPPQPGPGSRAEISPATGLSPTVLRR
CCCCCCCCCCCCCEECCCCHHHCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHH
LGCDGLIRALLTDTHGNPLRPGRRRRPPNRQLRDTVHARDRGTCQYPGCAHTRWLHIHHL
HCHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCEEEEEEEE
VPWTEGGGTDIDNLTLVCGEHHRTLHDEDTKLRRTTAGRIVALLPDGRTPDPAPPANPGA
CCCCCCCCCCCCCEEEEECCCCCCCCCCHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCC
RPAEVLTEATRHVAPDAIATRNGGPFHLDDSIRALLRDHAA
CHHHHHHHHHHHCCCCHHCCCCCCCEEECHHHHHHHHHCCC
>Mature Secondary Structure 
ATARALEQLPAVRAAFTDGTVSYSKVRAITRIADPTTERLWLEHALHRTAGQLERLVRT
CHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH
LRQTTTDPDDRARTQAARRVSWRTDDNGMPHLTAVLPPDEGTQLITALDAARTSLDTTTD
HHHHCCCCHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHCCCCCC
SGTDAGQPPPDREVAAVPRDRRRDADALLDTPQPHPPQPGPGSRAEISPATGLSPTVLRR
CCCCCCCCCCCCCEECCCCHHHCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHH
LGCDGLIRALLTDTHGNPLRPGRRRRPPNRQLRDTVHARDRGTCQYPGCAHTRWLHIHHL
HCHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCEEEEEEEE
VPWTEGGGTDIDNLTLVCGEHHRTLHDEDTKLRRTTAGRIVALLPDGRTPDPAPPANPGA
CCCCCCCCCCCCCEEEEECCCCCCCCCCHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCC
RPAEVLTEATRHVAPDAIATRNGGPFHLDDSIRALLRDHAA
CHHHHHHHHHHHCCCCHHCCCCCCCEEECHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA