Definition Frankia sp. EAN1pec chromosome, complete genome.
Accession NC_009921
Length 8,982,042

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The map label for this gene is 158315223

Identifier: 158315223

GI number: 158315223

Start: 4053138

End: 4054232

Strand: Direct

Name: 158315223

Synonym: Franean1_3423

Alternate gene names: NA

Gene position: 4053138-4054232 (Clockwise)

Preceding gene: 158315220

Following gene: 158315225

Centisome position: 45.12

GC content: 61.74

Gene sequence:

>1095_bases
ATGGAACTAACAGCAGATCAGTGCGCAGAATTAAATATTTTCGCGAAAAACTACGATACGCCAGCGCCGGTGGCGACGCG
GGCCCGGATCGTGTTGTGGCAGACGGAGGGCCGACAGAAGAAAGAGATTGCCGCGCTGGCCGGGGTGTCCCGACCGACAG
TGGACCTATGGATTTCCCGTTACCGGAAAGACGGGATTGATGGATTGTTCGACCGGCCTCGTGGTGCCCCGCGAGAACAG
GTGCCGGCGATGGTGCGGGGCCGGATACTCGCCCTGACCAGGAAGAGTCCGCCGGCGGAGACCGGCTTGTCGCATTGGTC
GAGCCGACAGATGACCACGTTCATCAAGCGCACCACGGGCGCGTCGGTCTCGCACTTCTATGTGGCGAAGCTGTGGCGGG
ACCACGGGTTGAAGCCGTACCAGCAGGGCACCTTCAAGATCAGTAAGGATCCGCGCTTCGCGGAGAAGATCGCCGATATC
GTCGGCCTCTACCTCGAATCGCCTGGAGGTGCGGTCGTGCTCAGCGTAGACGAAAAAGATCAGATCCAGGCGTTGGACCG
CACCCAGCCGCTGCTGCCGATCACGTTCGGCGCCCGCGAGAAGCGCACCCACGACTACGTCCGCAACGGCACGACCAACC
TGTTCGCCGCGTTGAACGTGGGGACCGGCGAGGTGTACGGCGAATGCCGGCCGGCTCGTGACGGTGCACACTTTCTCGCC
TTTCTGAAGAACGCTGTCGAGCCCCATGCCGGCAGGGAGGTCCACATCGTGCTGGACAACCTCGGCATTCACACGACACC
GGACGTCCGGTCCTGGCTTACGCAGAACCCGCATGTCCACTTCCACTTCACCCCGATCGGCTCGTCCTGGATCAACCAGA
TCGAGACGTGGTTCGGTATCATCACCCGCCAGTCGATCCGCCGCGGCACCTTCTCCTCCGTCCAGATCCTCATCAACCAG
ATCCGCGACTACATCGCTCATTGGAACAGCAACCCCGAGCCGTTCGTCTGGACCGCGACCGCGGACGAAATCCTGGCCAA
AGTCCGCCTCGTTCAGGTGAGCGTCAAGAAGCTGGTCGGCAACAACAGCAAGTAA

Upstream 100 bases:

>100_bases
GTCTCGTGAGAGCTGATACTTTACGTTACGCCAAGTTGATTCAAATCAATCCCGACACCGTGGACTTTACGTGTCCGCAG
ATCGGGTGTGCCATACGAGT

Downstream 100 bases:

>100_bases
AGGAAACGGAATCATGGGACACTAGCCCCGTCTTCCGCACATGGGCCCGTGACCTGCGGCAATACATTGATTGATTAACA
TGTTCGGGTCGCTGACTTGC

Product: putative transposase

Products: NA

Alternate protein names: ISO-IS200 39 kDa protein [H]

Number of amino acids: Translated: 364; Mature: 364

Protein sequence:

>364_residues
MELTADQCAELNIFAKNYDTPAPVATRARIVLWQTEGRQKKEIAALAGVSRPTVDLWISRYRKDGIDGLFDRPRGAPREQ
VPAMVRGRILALTRKSPPAETGLSHWSSRQMTTFIKRTTGASVSHFYVAKLWRDHGLKPYQQGTFKISKDPRFAEKIADI
VGLYLESPGGAVVLSVDEKDQIQALDRTQPLLPITFGAREKRTHDYVRNGTTNLFAALNVGTGEVYGECRPARDGAHFLA
FLKNAVEPHAGREVHIVLDNLGIHTTPDVRSWLTQNPHVHFHFTPIGSSWINQIETWFGIITRQSIRRGTFSSVQILINQ
IRDYIAHWNSNPEPFVWTATADEILAKVRLVQVSVKKLVGNNSK

Sequences:

>Translated_364_residues
MELTADQCAELNIFAKNYDTPAPVATRARIVLWQTEGRQKKEIAALAGVSRPTVDLWISRYRKDGIDGLFDRPRGAPREQ
VPAMVRGRILALTRKSPPAETGLSHWSSRQMTTFIKRTTGASVSHFYVAKLWRDHGLKPYQQGTFKISKDPRFAEKIADI
VGLYLESPGGAVVLSVDEKDQIQALDRTQPLLPITFGAREKRTHDYVRNGTTNLFAALNVGTGEVYGECRPARDGAHFLA
FLKNAVEPHAGREVHIVLDNLGIHTTPDVRSWLTQNPHVHFHFTPIGSSWINQIETWFGIITRQSIRRGTFSSVQILINQ
IRDYIAHWNSNPEPFVWTATADEILAKVRLVQVSVKKLVGNNSK
>Mature_364_residues
MELTADQCAELNIFAKNYDTPAPVATRARIVLWQTEGRQKKEIAALAGVSRPTVDLWISRYRKDGIDGLFDRPRGAPREQ
VPAMVRGRILALTRKSPPAETGLSHWSSRQMTTFIKRTTGASVSHFYVAKLWRDHGLKPYQQGTFKISKDPRFAEKIADI
VGLYLESPGGAVVLSVDEKDQIQALDRTQPLLPITFGAREKRTHDYVRNGTTNLFAALNVGTGEVYGECRPARDGAHFLA
FLKNAVEPHAGREVHIVLDNLGIHTTPDVRSWLTQNPHVHFHFTPIGSSWINQIETWFGIITRQSIRRGTFSSVQILINQ
IRDYIAHWNSNPEPFVWTATADEILAKVRLVQVSVKKLVGNNSK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009057
- InterPro:   IPR001584 [H]

Pfam domain/function: PF00665 rve [H]

EC number: NA

Molecular weight: Translated: 40921; Mature: 40921

Theoretical pI: Translated: 10.27; Mature: 10.27

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MELTADQCAELNIFAKNYDTPAPVATRARIVLWQTEGRQKKEIAALAGVSRPTVDLWISR
CCCCHHHHCEEEEEEECCCCCCCCCCCEEEEEEECCCCCHHHHHHHHCCCCCHHHHHHHH
YRKDGIDGLFDRPRGAPREQVPAMVRGRILALTRKSPPAETGLSHWSSRQMTTFIKRTTG
HHHCCCCCHHCCCCCCCHHHCCHHHCCEEEEEECCCCCHHHHHHHCCCHHHHHHHHHHCC
ASVSHFYVAKLWRDHGLKPYQQGTFKISKDPRFAEKIADIVGLYLESPGGAVVLSVDEKD
CCHHHHHHHHHHHHCCCCCCCCCCEEECCCCHHHHHHHHHHHHHEECCCCEEEEEECCHH
QIQALDRTQPLLPITFGAREKRTHDYVRNGTTNLFAALNVGTGEVYGECRPARDGAHFLA
HHHHHHCCCCCEEEEECCCHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCCCHHHHHH
FLKNAVEPHAGREVHIVLDNLGIHTTPDVRSWLTQNPHVHFHFTPIGSSWINQIETWFGI
HHHHHCCCCCCCEEEEEEECCCCCCCCHHHHHHCCCCEEEEEEECCCHHHHHHHHHHHHH
ITRQSIRRGTFSSVQILINQIRDYIAHWNSNPEPFVWTATADEILAKVRLVQVSVKKLVG
HHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHC
NNSK
CCCC
>Mature Secondary Structure
MELTADQCAELNIFAKNYDTPAPVATRARIVLWQTEGRQKKEIAALAGVSRPTVDLWISR
CCCCHHHHCEEEEEEECCCCCCCCCCCEEEEEEECCCCCHHHHHHHHCCCCCHHHHHHHH
YRKDGIDGLFDRPRGAPREQVPAMVRGRILALTRKSPPAETGLSHWSSRQMTTFIKRTTG
HHHCCCCCHHCCCCCCCHHHCCHHHCCEEEEEECCCCCHHHHHHHCCCHHHHHHHHHHCC
ASVSHFYVAKLWRDHGLKPYQQGTFKISKDPRFAEKIADIVGLYLESPGGAVVLSVDEKD
CCHHHHHHHHHHHHCCCCCCCCCCEEECCCCHHHHHHHHHHHHHEECCCCEEEEEECCHH
QIQALDRTQPLLPITFGAREKRTHDYVRNGTTNLFAALNVGTGEVYGECRPARDGAHFLA
HHHHHHCCCCCEEEEECCCHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCCCHHHHHH
FLKNAVEPHAGREVHIVLDNLGIHTTPDVRSWLTQNPHVHFHFTPIGSSWINQIETWFGI
HHHHHCCCCCCCEEEEEEECCCCCCCCHHHHHHCCCCEEEEEEECCCHHHHHHHHHHHHH
ITRQSIRRGTFSSVQILINQIRDYIAHWNSNPEPFVWTATADEILAKVRLVQVSVKKLVG
HHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHC
NNSK
CCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 2824781 [H]