The gene/protein map for NC_009921 is currently unavailable.
Definition Frankia sp. EAN1pec chromosome, complete genome.
Accession NC_009921
Length 8,982,042

Click here to switch to the map view.

The map label for this gene is 158315219

Identifier: 158315219

GI number: 158315219

Start: 4049067

End: 4049702

Strand: Direct

Name: 158315219

Synonym: Franean1_3419

Alternate gene names: NA

Gene position: 4049067-4049702 (Clockwise)

Preceding gene: 158315217

Following gene: 158315220

Centisome position: 45.08

GC content: 69.34

Gene sequence:

>636_bases
GTGCGGGAAATAGCCGAGAAGGCGGGCGCGTCGAAGCCTACCGTGCGGCTGTGGCTGTCGCGCTATGACGAGGAGGGGCC
GGACGGCTTGGTGAGCCGGGTGTCCCCGGGGCGGCCACGGGAGGTCCCGGGTCGGGTACGGGCGCGGATCCTGGCGTTGA
CCAGGACCACCCCTCCGCCGGAGACCGGACTGAGCCACTGGACGAGCACCGAGATGGCGCGGTACCTGAAGCGCCGCGAA
GGAGTGTCGGTCTCGCACACCTTCGTGGCCCAGTTGTGGCGGGAGAACAATCTCCAGCCGCACCGGCACCGAGTCTTCAA
GCTCTCGGCGGACCCGGATTTCGAGGCCAAGGTGAAGGACGCCGTCGGCCTCTACCTCGATCCCCCCGAGGGCGCCGAGG
TGCTGTCGATCGACGAAAAGCCTGGGGTGCAGGCACTCGACCGGACGCAGCCACCGCGGCCGGTCGCCTCCGGCCGGGTC
GCCACCCGCACGCACGACTACCAGCGGAAGGGCACGACCGACCTGTTCGCCGCCCTCGACGTCGGGACGGGGCGGGTCAC
CGCCAGGTGCTTCCCCAGCCACACCAGGGCCGATTTCCTCACGTTCATGGACCCTCGACTTTCGCACTTTCCTTGA

Upstream 100 bases:

>100_bases
GATATTCTCGCGTCCTTGGCTGGAGGCGGTGGGTACGACGTACGACAGGTCTGCGGCTGCCCGCGCCCGTATGGTGCTAT
GGCGGGACGAAGGATTCTCA

Downstream 100 bases:

>100_bases
TTGCCGGTAGTGGTGTGTCGAGGTTAATTGAGTTCGCTCTTTGAACGAAGGAGAATCCGTGGGCGGTGTCCGAGCGTGGC
ACCGTGCGGCGCGTCGAAAA

Product: putative transposase

Products: NA

Alternate protein names: Integrase Catalytic Region; ISRSO5-Transposase Protein; Feruloyl Esterase; ISMsm2 Transposase; Isrso5-Transposase Protein; ISMsm5 Transposase; Integrase Catalytic Subunit; Aminoglycoside Phosphotransferase; ISPsy1 Transposase; Inactivated Transposase; ISPsy25 Transposase; ISBmu8 Transposase; Transposase Of

Number of amino acids: Translated: 211; Mature: 211

Protein sequence:

>211_residues
MREIAEKAGASKPTVRLWLSRYDEEGPDGLVSRVSPGRPREVPGRVRARILALTRTTPPPETGLSHWTSTEMARYLKRRE
GVSVSHTFVAQLWRENNLQPHRHRVFKLSADPDFEAKVKDAVGLYLDPPEGAEVLSIDEKPGVQALDRTQPPRPVASGRV
ATRTHDYQRKGTTDLFAALDVGTGRVTARCFPSHTRADFLTFMDPRLSHFP

Sequences:

>Translated_211_residues
MREIAEKAGASKPTVRLWLSRYDEEGPDGLVSRVSPGRPREVPGRVRARILALTRTTPPPETGLSHWTSTEMARYLKRRE
GVSVSHTFVAQLWRENNLQPHRHRVFKLSADPDFEAKVKDAVGLYLDPPEGAEVLSIDEKPGVQALDRTQPPRPVASGRV
ATRTHDYQRKGTTDLFAALDVGTGRVTARCFPSHTRADFLTFMDPRLSHFP
>Mature_211_residues
MREIAEKAGASKPTVRLWLSRYDEEGPDGLVSRVSPGRPREVPGRVRARILALTRTTPPPETGLSHWTSTEMARYLKRRE
GVSVSHTFVAQLWRENNLQPHRHRVFKLSADPDFEAKVKDAVGLYLDPPEGAEVLSIDEKPGVQALDRTQPPRPVASGRV
ATRTHDYQRKGTTDLFAALDVGTGRVTARCFPSHTRADFLTFMDPRLSHFP

Specific function: Unknown

COG id: COG3335

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23673; Mature: 23673

Theoretical pI: Translated: 10.38; Mature: 10.38

Prosite motif: PS00228 TUBULIN_B_AUTOREG

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MREIAEKAGASKPTVRLWLSRYDEEGPDGLVSRVSPGRPREVPGRVRARILALTRTTPPP
CCHHHHHHCCCCCHHHHHHHHCCCCCCCHHHHCCCCCCCCCCCHHHHHEEEEEECCCCCC
ETGLSHWTSTEMARYLKRREGVSVSHTFVAQLWRENNLQPHRHRVFKLSADPDFEAKVKD
CCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCHHHHH
AVGLYLDPPEGAEVLSIDEKPGVQALDRTQPPRPVASGRVATRTHDYQRKGTTDLFAALD
CCCEEECCCCCCEEEEECCCCCCHHHHCCCCCCCCCCCEEECCCCCHHHCCCHHHHHEEE
VGTGRVTARCFPSHTRADFLTFMDPRLSHFP
CCCCCEEEEECCCCCHHHHHHHCCCHHCCCC
>Mature Secondary Structure
MREIAEKAGASKPTVRLWLSRYDEEGPDGLVSRVSPGRPREVPGRVRARILALTRTTPPP
CCHHHHHHCCCCCHHHHHHHHCCCCCCCHHHHCCCCCCCCCCCHHHHHEEEEEECCCCCC
ETGLSHWTSTEMARYLKRREGVSVSHTFVAQLWRENNLQPHRHRVFKLSADPDFEAKVKD
CCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCHHHHH
AVGLYLDPPEGAEVLSIDEKPGVQALDRTQPPRPVASGRVATRTHDYQRKGTTDLFAALD
CCCEEECCCCCCEEEEECCCCCCHHHHCCCCCCCCCCCEEECCCCCHHHCCCHHHHHEEE
VGTGRVTARCFPSHTRADFLTFMDPRLSHFP
CCCCCEEEEECCCCCHHHHHHHCCCHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA