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The map label for this gene is 158315209

Identifier: 158315209

GI number: 158315209

Start: 4039538

End: 4040437

Strand: Reverse

Name: 158315209

Synonym: Franean1_3409

Alternate gene names: NA

Gene position: 4040437-4039538 (Counterclockwise)

Preceding gene: 158315210

Following gene: 158315202

Centisome position: 44.98

GC content: 68.67

Gene sequence:

>900_bases
GTGCTCGCCGCACTGATCCGACTCCTGCCCAGAGCGCTGCGAGCGCACCGGCTGATCACCCCGGGGACCGTCCTGCGGTG
GCACCGCCGTCTGATCACACGGAAATGGACCTCCTCGCGGCGGATGGGTCAGCCACCGGTCGGCACGGAGATCGTGACCC
TCATCGAGCGGCTCGCGACCGAGAACACGACGTGGGGCTACCCGCGGATCCGGGGCGAGCTCCTCAAGCTCGGTCACCGG
GTCAGCGCCTCCACGATCCGCCGGGTCCTGACGTCCCTCGGGCTGCCCCCGGCACCGCAACGGCAGACCGACACGACGTG
GCGACAGTTCCTGCGCACGCAGGCGTCGACGATGCTGGCCGTCGACTTCTTCCACGTGGACTGCGCGGTGACGCTCCGGC
GTCTGTACTGCTTCTTCGTCATCGAGGTCGGCTCCCGCATCGTCCACATCCTCGGGGTCACCGCCCACCCCGACGGACCG
TGGACCACCCAACAAGCCCGGAACCTGCTCATGGATCTCGGTGACCGGGCGGCCGACTTCCAGTTCCTGGTCCGTGACCG
GGCCGGCCAGTTCACCGCGTCGTTCGACGCAGTCCTCGCCGACGCCGGCATCACCGCGATCAAGATCCCACCCCGAACCC
CGCGGGCGAACGCCTACGCGGAACGGTTCGTCCGCACCGTCCGGACCGAGGTCACCGACCGCATGCTGATCTTCGGCGAA
CGGCACCTGCGCACCGTCCTGGCCGAGTACGCACGGCACTACAACGGACGACGACCCCACCGCGGTTGTGGCCTTCAACC
GCCCCGGCCCGACCACCCTGTCGCAGACCTGACCAAGGAACGGATCAAGCGCCGACCCGTCCTCGGTGGCCTGATCAACG
AATACGAACGAGCCGCCTAA

Upstream 100 bases:

>100_bases
GTCGGCGTCCAAGGACATCGAGCTGCTGGTGCTGCGGCATGAGGTCGCGGTGCTGCGCCGTACCCAGCCCAAGCCCCGGT
GGGACTGAGCGGACCGGGCG

Downstream 100 bases:

>100_bases
AACCCCAGGTCAAGGCCGGTGGCCGAGTTCTGACACCCCACAGGCTTGGAAACAGTCCTGCTGGAGATGTTCGGGGCCGA
AGGTGCTGTCCGTTCCGAGG

Product: integrase catalytic subunit

Products: NA

Alternate protein names: Transposase; Integrase; Integrase Catalytic Subunit; LOW QUALITY PROTEIN Integrase; LOW QUALITY PROTEIN Integrase Catalytic Region; Transposase IS; Tranposase; LOW QUALITY PROTEIN Transposase

Number of amino acids: Translated: 299; Mature: 299

Protein sequence:

>299_residues
MLAALIRLLPRALRAHRLITPGTVLRWHRRLITRKWTSSRRMGQPPVGTEIVTLIERLATENTTWGYPRIRGELLKLGHR
VSASTIRRVLTSLGLPPAPQRQTDTTWRQFLRTQASTMLAVDFFHVDCAVTLRRLYCFFVIEVGSRIVHILGVTAHPDGP
WTTQQARNLLMDLGDRAADFQFLVRDRAGQFTASFDAVLADAGITAIKIPPRTPRANAYAERFVRTVRTEVTDRMLIFGE
RHLRTVLAEYARHYNGRRPHRGCGLQPPRPDHPVADLTKERIKRRPVLGGLINEYERAA

Sequences:

>Translated_299_residues
MLAALIRLLPRALRAHRLITPGTVLRWHRRLITRKWTSSRRMGQPPVGTEIVTLIERLATENTTWGYPRIRGELLKLGHR
VSASTIRRVLTSLGLPPAPQRQTDTTWRQFLRTQASTMLAVDFFHVDCAVTLRRLYCFFVIEVGSRIVHILGVTAHPDGP
WTTQQARNLLMDLGDRAADFQFLVRDRAGQFTASFDAVLADAGITAIKIPPRTPRANAYAERFVRTVRTEVTDRMLIFGE
RHLRTVLAEYARHYNGRRPHRGCGLQPPRPDHPVADLTKERIKRRPVLGGLINEYERAA
>Mature_299_residues
MLAALIRLLPRALRAHRLITPGTVLRWHRRLITRKWTSSRRMGQPPVGTEIVTLIERLATENTTWGYPRIRGELLKLGHR
VSASTIRRVLTSLGLPPAPQRQTDTTWRQFLRTQASTMLAVDFFHVDCAVTLRRLYCFFVIEVGSRIVHILGVTAHPDGP
WTTQQARNLLMDLGDRAADFQFLVRDRAGQFTASFDAVLADAGITAIKIPPRTPRANAYAERFVRTVRTEVTDRMLIFGE
RHLRTVLAEYARHYNGRRPHRGCGLQPPRPDHPVADLTKERIKRRPVLGGLINEYERAA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 34113; Mature: 34113

Theoretical pI: Translated: 11.89; Mature: 11.89

Prosite motif: PS50994 INTEGRASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLAALIRLLPRALRAHRLITPGTVLRWHRRLITRKWTSSRRMGQPPVGTEIVTLIERLAT
CHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHC
ENTTWGYPRIRGELLKLGHRVSASTIRRVLTSLGLPPAPQRQTDTTWRQFLRTQASTMLA
CCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHH
VDFFHVDCAVTLRRLYCFFVIEVGSRIVHILGVTAHPDGPWTTQQARNLLMDLGDRAADF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCHHHHHHHHHHHCCCHHHH
QFLVRDRAGQFTASFDAVLADAGITAIKIPPRTPRANAYAERFVRTVRTEVTDRMLIFGE
HHHHHHHCCCHHHHHHHHHHHCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
RHLRTVLAEYARHYNGRRPHRGCGLQPPRPDHPVADLTKERIKRRPVLGGLINEYERAA
HHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHCC
>Mature Secondary Structure
MLAALIRLLPRALRAHRLITPGTVLRWHRRLITRKWTSSRRMGQPPVGTEIVTLIERLAT
CHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHC
ENTTWGYPRIRGELLKLGHRVSASTIRRVLTSLGLPPAPQRQTDTTWRQFLRTQASTMLA
CCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHH
VDFFHVDCAVTLRRLYCFFVIEVGSRIVHILGVTAHPDGPWTTQQARNLLMDLGDRAADF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCHHHHHHHHHHHCCCHHHH
QFLVRDRAGQFTASFDAVLADAGITAIKIPPRTPRANAYAERFVRTVRTEVTDRMLIFGE
HHHHHHHCCCHHHHHHHHHHHCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
RHLRTVLAEYARHYNGRRPHRGCGLQPPRPDHPVADLTKERIKRRPVLGGLINEYERAA
HHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA