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The map label for this gene is hypD2 [H]

Identifier: 158315201

GI number: 158315201

Start: 4032563

End: 4033651

Strand: Reverse

Name: hypD2 [H]

Synonym: Franean1_3401

Alternate gene names: 158315201

Gene position: 4033651-4032563 (Counterclockwise)

Preceding gene: 158315202

Following gene: 158315200

Centisome position: 44.91

GC content: 73.0

Gene sequence:

>1089_bases
ATGAGATACCTCGACGAGTACCGCGACCCCGCCCTCGCGCGGCAGCTCCTCGACGAGATCCACACGACGGCCACCCGGCC
CTGGACCCTGATGGAGGTCTGCGGCGGCCAGACGCACACCATCGTCCGCCAGGGCATCGACAACCTGCTGCCGGCGGGCC
TGCGGATGATCCACGGGCCGGGCTGCCCGGTGTGCGTGACCCCGCTCGAACTCATCGACAAGGCCCTGGCCATCGCCGCC
CGTCCCGAGGTCATCTTCACCTCCTACGGCGACATGCTGCGGGTGCCCGGAACGGGGACCGACCTGTTGGCCCTGCGCGC
CCGCGGCTCCGACGTCCGCGTCGTCTACTCCCCGCTGGACGCGGTACGCCTGGCCGAACAGCACCCGGACCGCCAGGTGG
TCTTCTTCGCGGTCGGCTTCGAGACGACCGCGCCGGCGAACGCCATGGCGGTGCTGCGCGCCCACCAGCTCGGCCTGCCC
AACTTCAGCATCCTGGTCAGCCACGTCCTCGTCCCACCGGCTATGACGGCGCTCCTCGACGCGCCCGACCGCCAGGTCCA
GGGGTTCCTCGCCGCCGGCCACGTCTGCGCCGTCATGGGCTGGACGGAGTACGAGCCCATCGCGCACCGTTACCAGGTGC
CCGTCGTCGTGACCGGCTTCGAGCCGCTCGACCTGCTCGAGGGCATCCTGATGGCCGTCCGCCAGCTCGAGGCGGGCCAC
GCGCGGGTGGAGAACCAGTACGCCCGCGCCGTCCACCGCGACGGCAACAGCCGGGCGCGGGAGGCCATCCGCCGCGTGTT
CCGGGTGCGGGACCGCGCCTGGCGCGGCATCGGCACCATCCCGGACAGCGGCCTGGCCCTCACCGACGAGTTCGCCCGCT
ACGACGCCGAGACCCGCTTCGCCGTCTCCGGGCTGACCGCCCGGGAGCATCCCGCCTGCATCGCCGGCGACATCCTCACC
GGCGCCCGCGAGCCGACCGACTGCACCGCCTATGGGACGGCCTGCACGCCACGCACCCCGCTCGGCGCGCCGATGGTCTC
CACCGAGGGCACCTGCGCCGCCTACCACTCCGCCGGGAGGGCGTCGTGA

Upstream 100 bases:

>100_bases
TCGTTCACGTGGGGTTCGCCATCAGCATGGTCGACGAGGCCGAGGCGCACCGCACCCTGGAGATGCTCCGCTCGATGGGC
GCCACCCTGGAGGCGGAGCT

Downstream 100 bases:

>100_bases
CCACCGTTGACCCCACCTTCGCCAGCTGCGCGCTCCCCCGCGTCGAGACCGAGCGGGTCACGCTCGGGCACGGCAGCGGC
GGGCAGCTCTCCGCCGAGCT

Product: hydrogenase expression/formation protein HypD

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 362; Mature: 362

Protein sequence:

>362_residues
MRYLDEYRDPALARQLLDEIHTTATRPWTLMEVCGGQTHTIVRQGIDNLLPAGLRMIHGPGCPVCVTPLELIDKALAIAA
RPEVIFTSYGDMLRVPGTGTDLLALRARGSDVRVVYSPLDAVRLAEQHPDRQVVFFAVGFETTAPANAMAVLRAHQLGLP
NFSILVSHVLVPPAMTALLDAPDRQVQGFLAAGHVCAVMGWTEYEPIAHRYQVPVVVTGFEPLDLLEGILMAVRQLEAGH
ARVENQYARAVHRDGNSRAREAIRRVFRVRDRAWRGIGTIPDSGLALTDEFARYDAETRFAVSGLTAREHPACIAGDILT
GAREPTDCTAYGTACTPRTPLGAPMVSTEGTCAAYHSAGRAS

Sequences:

>Translated_362_residues
MRYLDEYRDPALARQLLDEIHTTATRPWTLMEVCGGQTHTIVRQGIDNLLPAGLRMIHGPGCPVCVTPLELIDKALAIAA
RPEVIFTSYGDMLRVPGTGTDLLALRARGSDVRVVYSPLDAVRLAEQHPDRQVVFFAVGFETTAPANAMAVLRAHQLGLP
NFSILVSHVLVPPAMTALLDAPDRQVQGFLAAGHVCAVMGWTEYEPIAHRYQVPVVVTGFEPLDLLEGILMAVRQLEAGH
ARVENQYARAVHRDGNSRAREAIRRVFRVRDRAWRGIGTIPDSGLALTDEFARYDAETRFAVSGLTAREHPACIAGDILT
GAREPTDCTAYGTACTPRTPLGAPMVSTEGTCAAYHSAGRAS
>Mature_362_residues
MRYLDEYRDPALARQLLDEIHTTATRPWTLMEVCGGQTHTIVRQGIDNLLPAGLRMIHGPGCPVCVTPLELIDKALAIAA
RPEVIFTSYGDMLRVPGTGTDLLALRARGSDVRVVYSPLDAVRLAEQHPDRQVVFFAVGFETTAPANAMAVLRAHQLGLP
NFSILVSHVLVPPAMTALLDAPDRQVQGFLAAGHVCAVMGWTEYEPIAHRYQVPVVVTGFEPLDLLEGILMAVRQLEAGH
ARVENQYARAVHRDGNSRAREAIRRVFRVRDRAWRGIGTIPDSGLALTDEFARYDAETRFAVSGLTAREHPACIAGDILT
GAREPTDCTAYGTACTPRTPLGAPMVSTEGTCAAYHSAGRAS

Specific function: Required For The Formation Of All Three Hydrogenase Isoenzymes. [C]

COG id: COG0409

COG function: function code O; Hydrogenase maturation factor

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the hypD family [H]

Homologues:

Organism=Escherichia coli, GI1789084, Length=365, Percent_Identity=46.5753424657534, Blast_Score=346, Evalue=2e-96,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002780 [H]

Pfam domain/function: PF01924 HypD [H]

EC number: NA

Molecular weight: Translated: 39322; Mature: 39322

Theoretical pI: Translated: 6.78; Mature: 6.78

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRYLDEYRDPALARQLLDEIHTTATRPWTLMEVCGGQTHTIVRQGIDNLLPAGLRMIHGP
CCCHHHHCCHHHHHHHHHHHHHHCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHEECCC
GCPVCVTPLELIDKALAIAARPEVIFTSYGDMLRVPGTGTDLLALRARGSDVRVVYSPLD
CCCEEECHHHHHHHHHHHHCCCCEEEECCCCEEECCCCCCCEEEEEECCCCEEEEECCHH
AVRLAEQHPDRQVVFFAVGFETTAPANAMAVLRAHQLGLPNFSILVSHVLVPPAMTALLD
HHHHHHHCCCCEEEEEEECCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHC
APDRQVQGFLAAGHVCAVMGWTEYEPIAHRYQVPVVVTGFEPLDLLEGILMAVRQLEAGH
CCCHHHHHHHHHCCCCEEECCCCCCCHHHHEECCEEEECCCHHHHHHHHHHHHHHHHHHH
ARVENQYARAVHRDGNSRAREAIRRVFRVRDRAWRGIGTIPDSGLALTDEFARYDAETRF
HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEECHHHHHCCCCCEE
AVSGLTAREHPACIAGDILTGAREPTDCTAYGTACTPRTPLGAPMVSTEGTCAAYHSAGR
EEECCCCCCCCCCEEHHHHCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCHHHHCCCCC
AS
CC
>Mature Secondary Structure
MRYLDEYRDPALARQLLDEIHTTATRPWTLMEVCGGQTHTIVRQGIDNLLPAGLRMIHGP
CCCHHHHCCHHHHHHHHHHHHHHCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHEECCC
GCPVCVTPLELIDKALAIAARPEVIFTSYGDMLRVPGTGTDLLALRARGSDVRVVYSPLD
CCCEEECHHHHHHHHHHHHCCCCEEEECCCCEEECCCCCCCEEEEEECCCCEEEEECCHH
AVRLAEQHPDRQVVFFAVGFETTAPANAMAVLRAHQLGLPNFSILVSHVLVPPAMTALLD
HHHHHHHCCCCEEEEEEECCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHC
APDRQVQGFLAAGHVCAVMGWTEYEPIAHRYQVPVVVTGFEPLDLLEGILMAVRQLEAGH
CCCHHHHHHHHHCCCCEEECCCCCCCHHHHEECCEEEECCCHHHHHHHHHHHHHHHHHHH
ARVENQYARAVHRDGNSRAREAIRRVFRVRDRAWRGIGTIPDSGLALTDEFARYDAETRF
HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEECHHHHHCCCCCEE
AVSGLTAREHPACIAGDILTGAREPTDCTAYGTACTPRTPLGAPMVSTEGTCAAYHSAGR
EEECCCCCCCCCCEEHHHHCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCHHHHCCCCC
AS
CC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12597275; 8510650 [H]