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The map label for this gene is ydfJ [H]

Identifier: 158315192

GI number: 158315192

Start: 4018172

End: 4020376

Strand: Reverse

Name: ydfJ [H]

Synonym: Franean1_3392

Alternate gene names: 158315192

Gene position: 4020376-4018172 (Counterclockwise)

Preceding gene: 158315198

Following gene: 158315191

Centisome position: 44.76

GC content: 69.25

Gene sequence:

>2205_bases
GTGGGGGTGCTGGTCACCGTCGGCTTCGGCGCGGCCAGGGCACCCGCCGCCCCGGACGACGCGTTCTCCATGCCAGGTAC
CGAATCCCAGCGGGCGTTCGACCTCCTAGACGAACGCTTCCCCGGCACCGGAGCGGACGGGGCGGTCGCCCGCATCGTCT
TCGTCGCCCCACCAGGCCAGACCCTGACCACACCCGAAAACCGCACCACTGTTGAACGAGTCGTCGCGGAGGCCGCCGCC
AGCCCACAGGTCGCCAACGCCGTGAACCCCTTCCAAAGCGGGGCGGTCAGCACGGACGCGGCGACCGCCTACGCCACGGT
CTCCTACACGGCGATCAGTGATGATCTCACCGACGCCACCAAAAACAGCCTGCAAGGCGCGGTCACAGACGGCCAGACAG
CGGGCCTGACCGTCGAGCTAGGCGGAGACGCGCTGACAACCCGGCCAGGGGCGGGCGGAGTGACCGAGGCCGTCGGAATC
GCGATCGCCGCACTCGTCCTGCTGATCACCTTCGGATCCCTGGCCGCAGCCGGGCTACCGCTACTGACCGCGATCGTCAG
CGTCGGCGTCGGAATCGCCTCGATCATGGCCCTGGCCAGCACCCTCGGCCTGTCCTCAACCACCAGCACCCTCGCGATGA
TGCTCGGCCTCGCCGTCGGCATCGACTACGCCGTGTTCATCGTCTCCCGCTACCGGGAAGAACACGCCCGCGGGCTGGAA
CCCCAGGACGCCACAGCGGTCGCGACCGGCACCGCCGGGTCATCGGTAGTGTTCGCCGGGCTCACCGTGGTGATCGCGCT
GGCCGGCCTGTTCATCGTCGGAGTCCCAACCCTGACGAAAATGGGCCTGGCCGCCGCGGGCACCGTCGGTATCGCCGTCG
GAGTCGCGCTGACCCTCGTCCCGGCGCTGCTCGGGTTCTTCCCCCGCGCCGTGCTCCCCCGCTCCACACGCAAGAGCACC
ACGCGCAGCACCACAAGTAGGTTCGCGCGCAGAGCCACGAGGAAGACCGAGCACCGCGGGCCCAACGCGGGCACCCGCTG
GGCGAACCTGATCCTGCGCCGCCCGCTGCCCGTCCTCATCCTCTCCGTACTCGCCCTGGGGGCGATCGCCCTGCCCGTCC
TGGACCTGCGCCTGGGCACGGCCGGCGACGAGGCGAAGCCCACCTCCACCACCGAACGCCGCGCCTACGACGACCTCGCC
GCGGGCTTCGGGCCAGGCTTCAACGGCCCACTGACCATCGTCGTCGACGCGACAGGTTCCGACAACGCGCAGACAGCGGT
CACCACGATCACCCAGAAGATCAGCGCAACACCCGGTGTCGTCTCCGCCTCGGCCGCCCGGTTCAACACCGCGGGCGACA
CAGCGGTATTCACCGCGGTGCCGGCCACCGGACCGAGCGAGGCAGCAACCAAGGACCTCGTCCACACCATCCGCGCGCAA
CGCGCCACGGTCACCGCCGCCACCGGCGCGACCTTCCAGGTCACCGGCACCACCGCCGTGAACATCGACATCGCCCAGAA
GGTCCAGGACGCACTCATCCCCTACCTCGCCATCGTGGTGGGCCTGGCGTTCCTGCTCCTGCTCGTGCTGTTCCGCTCGG
TACTCGTCCCACTCAAAGCCGCCCTCGGGTTCCTACTCTCCGTCCTGGCTGCCCTCGGAGCAGTCGTCGCGGTCTTCCAA
TGGGGCTGGCTCGCTGGGCTCATCGGCCTCCACCAAACCGGACCCATCATGAGCATGATGCCGATCTTCATGGTCGGTAT
CGTCTTCGGCCTCGCCATGGACTACGAGGTCTTCCTCGTCGCCCGCATCCGCGAGGCCCACGTCCACGGCGAGAACGCCC
GGGACGCGATCACCTCCGGGTTCGGGTACAGCGCCCGCGTCGTGGTCGCCGCCGCACTGATCATGATGGCGGTCTTCGCC
GGCTTCATCGGCACCAGCGAACCGATCATCAAAATGATCGGGTTCGGCCTGGCCACCGCGGTCCTACTCGACGCCTTCGT
CGTCCGCATGACCATCGTCCCCGCCGTCCTCGCCCTTCTCGGAGAGAAGGCATGGTGGATCCCACGCCACCTCGACCGGG
TCCTGCCCCACATCGACGTCGAGGGCGAGACGCTGAACCGGCCCACCGCCGTGGCACCGGCCGTTGCGGCACCGGCCACC
GGCCGCGAGGAACCCGTCGCCCTGGAATCCGCGTCCGCACGATAA

Upstream 100 bases:

>100_bases
GTGTACCCGAGAAGATGTGGAGATCTCCCCCGTGGCGACTTTTCTTTATCGGCTGGGCCGTCTGTCGTTCCGGCGGCGCC
GATACGTTCTTCTGCTATGG

Downstream 100 bases:

>100_bases
GCACGGCCCCGTCCGAGGACCGCCGGCACCCGGCAGGCGGCACTGCGGCCCTCGGACGGGGCCCGTACCGTGGGCACCAC
GGCCCAGCAACGGCCCAGCA

Product: MMPL domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 734; Mature: 733

Protein sequence:

>734_residues
MGVLVTVGFGAARAPAAPDDAFSMPGTESQRAFDLLDERFPGTGADGAVARIVFVAPPGQTLTTPENRTTVERVVAEAAA
SPQVANAVNPFQSGAVSTDAATAYATVSYTAISDDLTDATKNSLQGAVTDGQTAGLTVELGGDALTTRPGAGGVTEAVGI
AIAALVLLITFGSLAAAGLPLLTAIVSVGVGIASIMALASTLGLSSTTSTLAMMLGLAVGIDYAVFIVSRYREEHARGLE
PQDATAVATGTAGSSVVFAGLTVVIALAGLFIVGVPTLTKMGLAAAGTVGIAVGVALTLVPALLGFFPRAVLPRSTRKST
TRSTTSRFARRATRKTEHRGPNAGTRWANLILRRPLPVLILSVLALGAIALPVLDLRLGTAGDEAKPTSTTERRAYDDLA
AGFGPGFNGPLTIVVDATGSDNAQTAVTTITQKISATPGVVSASAARFNTAGDTAVFTAVPATGPSEAATKDLVHTIRAQ
RATVTAATGATFQVTGTTAVNIDIAQKVQDALIPYLAIVVGLAFLLLLVLFRSVLVPLKAALGFLLSVLAALGAVVAVFQ
WGWLAGLIGLHQTGPIMSMMPIFMVGIVFGLAMDYEVFLVARIREAHVHGENARDAITSGFGYSARVVVAAALIMMAVFA
GFIGTSEPIIKMIGFGLATAVLLDAFVVRMTIVPAVLALLGEKAWWIPRHLDRVLPHIDVEGETLNRPTAVAPAVAAPAT
GREEPVALESASAR

Sequences:

>Translated_734_residues
MGVLVTVGFGAARAPAAPDDAFSMPGTESQRAFDLLDERFPGTGADGAVARIVFVAPPGQTLTTPENRTTVERVVAEAAA
SPQVANAVNPFQSGAVSTDAATAYATVSYTAISDDLTDATKNSLQGAVTDGQTAGLTVELGGDALTTRPGAGGVTEAVGI
AIAALVLLITFGSLAAAGLPLLTAIVSVGVGIASIMALASTLGLSSTTSTLAMMLGLAVGIDYAVFIVSRYREEHARGLE
PQDATAVATGTAGSSVVFAGLTVVIALAGLFIVGVPTLTKMGLAAAGTVGIAVGVALTLVPALLGFFPRAVLPRSTRKST
TRSTTSRFARRATRKTEHRGPNAGTRWANLILRRPLPVLILSVLALGAIALPVLDLRLGTAGDEAKPTSTTERRAYDDLA
AGFGPGFNGPLTIVVDATGSDNAQTAVTTITQKISATPGVVSASAARFNTAGDTAVFTAVPATGPSEAATKDLVHTIRAQ
RATVTAATGATFQVTGTTAVNIDIAQKVQDALIPYLAIVVGLAFLLLLVLFRSVLVPLKAALGFLLSVLAALGAVVAVFQ
WGWLAGLIGLHQTGPIMSMMPIFMVGIVFGLAMDYEVFLVARIREAHVHGENARDAITSGFGYSARVVVAAALIMMAVFA
GFIGTSEPIIKMIGFGLATAVLLDAFVVRMTIVPAVLALLGEKAWWIPRHLDRVLPHIDVEGETLNRPTAVAPAVAAPAT
GREEPVALESASAR
>Mature_733_residues
GVLVTVGFGAARAPAAPDDAFSMPGTESQRAFDLLDERFPGTGADGAVARIVFVAPPGQTLTTPENRTTVERVVAEAAAS
PQVANAVNPFQSGAVSTDAATAYATVSYTAISDDLTDATKNSLQGAVTDGQTAGLTVELGGDALTTRPGAGGVTEAVGIA
IAALVLLITFGSLAAAGLPLLTAIVSVGVGIASIMALASTLGLSSTTSTLAMMLGLAVGIDYAVFIVSRYREEHARGLEP
QDATAVATGTAGSSVVFAGLTVVIALAGLFIVGVPTLTKMGLAAAGTVGIAVGVALTLVPALLGFFPRAVLPRSTRKSTT
RSTTSRFARRATRKTEHRGPNAGTRWANLILRRPLPVLILSVLALGAIALPVLDLRLGTAGDEAKPTSTTERRAYDDLAA
GFGPGFNGPLTIVVDATGSDNAQTAVTTITQKISATPGVVSASAARFNTAGDTAVFTAVPATGPSEAATKDLVHTIRAQR
ATVTAATGATFQVTGTTAVNIDIAQKVQDALIPYLAIVVGLAFLLLLVLFRSVLVPLKAALGFLLSVLAALGAVVAVFQW
GWLAGLIGLHQTGPIMSMMPIFMVGIVFGLAMDYEVFLVARIREAHVHGENARDAITSGFGYSARVVVAAALIMMAVFAG
FIGTSEPIIKMIGFGLATAVLLDAFVVRMTIVPAVLALLGEKAWWIPRHLDRVLPHIDVEGETLNRPTAVAPAVAAPATG
REEPVALESASAR

Specific function: Unknown

COG id: COG2409

COG function: function code R; Predicted drug exporters of the RND superfamily

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the mmpL family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004869
- InterPro:   IPR000731 [H]

Pfam domain/function: PF03176 MMPL [H]

EC number: NA

Molecular weight: Translated: 75080; Mature: 74949

Theoretical pI: Translated: 6.98; Mature: 6.98

Prosite motif: PS50156 SSD

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGVLVTVGFGAARAPAAPDDAFSMPGTESQRAFDLLDERFPGTGADGAVARIVFVAPPGQ
CCEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCEEEEEEEECCCC
TLTTPENRTTVERVVAEAAASPQVANAVNPFQSGAVSTDAATAYATVSYTAISDDLTDAT
CCCCCCCHHHHHHHHHHHHCCCHHHHHCCCHHCCCCCCCCHHHEEEEEEEECCCHHHHHH
KNSLQGAVTDGQTAGLTVELGGDALTTRPGAGGVTEAVGIAIAALVLLITFGSLAAAGLP
HHHCCCCCCCCCCCCEEEEECCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
LLTAIVSVGVGIASIMALASTLGLSSTTSTLAMMLGLAVGIDYAVFIVSRYREEHARGLE
HHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PQDATAVATGTAGSSVVFAGLTVVIALAGLFIVGVPTLTKMGLAAAGTVGIAVGVALTLV
CCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH
PALLGFFPRAVLPRSTRKSTTRSTTSRFARRATRKTEHRGPNAGTRWANLILRRPLPVLI
HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCHHHHH
LSVLALGAIALPVLDLRLGTAGDEAKPTSTTERRAYDDLAAGFGPGFNGPLTIVVDATGS
HHHHHHHHHHHHHHHHEECCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCEEEEEECCCC
DNAQTAVTTITQKISATPGVVSASAARFNTAGDTAVFTAVPATGPSEAATKDLVHTIRAQ
CCCHHHHHHHHHHHCCCCCCCCCCHHHCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHH
RATVTAATGATFQVTGTTAVNIDIAQKVQDALIPYLAIVVGLAFLLLLVLFRSVLVPLKA
HHEEEEECCCEEEEECCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ALGFLLSVLAALGAVVAVFQWGWLAGLIGLHQTGPIMSMMPIFMVGIVFGLAMDYEVFLV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCHHHHHH
ARIREAHVHGENARDAITSGFGYSARVVVAAALIMMAVFAGFIGTSEPIIKMIGFGLATA
HHHHHHHCCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
VLLDAFVVRMTIVPAVLALLGEKAWWIPRHLDRVLPHIDVEGETLNRPTAVAPAVAAPAT
HHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCC
GREEPVALESASAR
CCCCCCCCCCCCCC
>Mature Secondary Structure 
GVLVTVGFGAARAPAAPDDAFSMPGTESQRAFDLLDERFPGTGADGAVARIVFVAPPGQ
CEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCEEEEEEEECCCC
TLTTPENRTTVERVVAEAAASPQVANAVNPFQSGAVSTDAATAYATVSYTAISDDLTDAT
CCCCCCCHHHHHHHHHHHHCCCHHHHHCCCHHCCCCCCCCHHHEEEEEEEECCCHHHHHH
KNSLQGAVTDGQTAGLTVELGGDALTTRPGAGGVTEAVGIAIAALVLLITFGSLAAAGLP
HHHCCCCCCCCCCCCEEEEECCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
LLTAIVSVGVGIASIMALASTLGLSSTTSTLAMMLGLAVGIDYAVFIVSRYREEHARGLE
HHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PQDATAVATGTAGSSVVFAGLTVVIALAGLFIVGVPTLTKMGLAAAGTVGIAVGVALTLV
CCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH
PALLGFFPRAVLPRSTRKSTTRSTTSRFARRATRKTEHRGPNAGTRWANLILRRPLPVLI
HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCHHHHH
LSVLALGAIALPVLDLRLGTAGDEAKPTSTTERRAYDDLAAGFGPGFNGPLTIVVDATGS
HHHHHHHHHHHHHHHHEECCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCEEEEEECCCC
DNAQTAVTTITQKISATPGVVSASAARFNTAGDTAVFTAVPATGPSEAATKDLVHTIRAQ
CCCHHHHHHHHHHHCCCCCCCCCCHHHCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHH
RATVTAATGATFQVTGTTAVNIDIAQKVQDALIPYLAIVVGLAFLLLLVLFRSVLVPLKA
HHEEEEECCCEEEEECCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ALGFLLSVLAALGAVVAVFQWGWLAGLIGLHQTGPIMSMMPIFMVGIVFGLAMDYEVFLV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCHHHHHH
ARIREAHVHGENARDAITSGFGYSARVVVAAALIMMAVFAGFIGTSEPIIKMIGFGLATA
HHHHHHHCCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
VLLDAFVVRMTIVPAVLALLGEKAWWIPRHLDRVLPHIDVEGETLNRPTAVAPAVAAPAT
HHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCC
GREEPVALESASAR
CCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]