| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158315189
Identifier: 158315189
GI number: 158315189
Start: 4014956
End: 4016098
Strand: Direct
Name: 158315189
Synonym: Franean1_3389
Alternate gene names: NA
Gene position: 4014956-4016098 (Clockwise)
Preceding gene: 158315188
Following gene: 158315193
Centisome position: 44.7
GC content: 69.2
Gene sequence:
>1143_bases ATGAACGACGTCGCCATCATCGGCGTGGGCCTGCATCCCTTCGGTCGCTTCGAGAAGTCGGCCATGGAGCTCGGCGCGGA CGCGATCCAGCTGGCGCTGAAGGATGCCGGGATCGAGTGGAAGGACATCCAGTTCGGTGTCGGTGGCAGCCTGGAGGTCG CCAACCCGGACGCGGTGACGAGGCTCGTCGGGCTGACCGGCATCCCGTTCACCGACGTGTTCAACGCCTGCGCGACCGCG GCCAGCGCCATCCAGCTGTGCGCCGACACGATCCGGCTCGGCAAGTACGACATCGGCATCGCCGTGGGCATGGACAAGCA CCCGCGCGGTGCTTTCACCGCCGACCCGTCGATGCTCGGCCTGCCGTCGTGGTATGCCGAGAACGGCCAGTTCGTCACCA CGCAGTTCTTCGGGATCAAGGCCAACCGCTACCTCCACGAGCACGGCATCTCGCAGCGGACGCTGGCGAAGGTCGCCGCC AAGAACTACCGCAACGGCGTGCTCAACCCGAACGCCTTCCGGCGTAAGCCGTTGAGCGAGGAGGAGATCCTCGGCTCGCC CATGCTCAACTATCCGTTGACGCACTACATGTTCTGCTCGCCGGACGAGGGCGCCGCCGCCGCCATCATGTGCCGCGCCG ACATCGCGCACCGGTTCACCTCGCAGCCGATCTACCTGCGCGCCGCGGAGATCCGCACCCGCCGCTTCGGCGCCTACGAG GTGCACAGCACCTTCGCACCGGTCGACGAGGACGTCGCGCCGACCGTCTACGCCGCCCGCGCCGCCTTCGAGGCGGCCGG CGTCGGCCCGGGCGACGTCGACGTGATCCAGCTTCAGGACACGGATGCCGGCGCGGAGATCATTCACATGGCCGAGTGCG GCTTCTGCGCCGACGGTGAGCAGGAGAAGCTGCTCGCCGAGGGCGCGACCGAGATCAACGGCCCGTTGCCGGTCAACACC GACGGCGGCCTCATCGCCAACGGCGAGCCGATCGGCGCATCCGGGCTCCGCCAGGTGCACGAGCTGGTCCGCCAGCTGCG TGGTCAGGCGGGTGACCGTCAGGTCGCCGGCAACCCGCGCGTCGGATTCGCCCAGGTCTACGGCGCCCCCGGCACGGCCG CGGCCACCGTCCTCACCGTCTGA
Upstream 100 bases:
>100_bases ATGGTGCCGTTCTACACCGACGCCGACGGCGACGAAGTGATCACCTTCGCCTTCGCCCCAGCCTGAGCCCCGCCGAACGA GCCAGAGAGGAACCACCGAG
Downstream 100 bases:
>100_bases GCTCACCGCCTGAGCGGGCGTTCCTGAAACGCCCGCTCAGTCCGGTCGAGCGGTTTGCAGCAGGCCGGACTGGTACGCGA TGACGACCAGCTGCGCCCGG
Product: Propanoyl-CoA C-acyltransferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 380; Mature: 380
Protein sequence:
>380_residues MNDVAIIGVGLHPFGRFEKSAMELGADAIQLALKDAGIEWKDIQFGVGGSLEVANPDAVTRLVGLTGIPFTDVFNACATA ASAIQLCADTIRLGKYDIGIAVGMDKHPRGAFTADPSMLGLPSWYAENGQFVTTQFFGIKANRYLHEHGISQRTLAKVAA KNYRNGVLNPNAFRRKPLSEEEILGSPMLNYPLTHYMFCSPDEGAAAAIMCRADIAHRFTSQPIYLRAAEIRTRRFGAYE VHSTFAPVDEDVAPTVYAARAAFEAAGVGPGDVDVIQLQDTDAGAEIIHMAECGFCADGEQEKLLAEGATEINGPLPVNT DGGLIANGEPIGASGLRQVHELVRQLRGQAGDRQVAGNPRVGFAQVYGAPGTAAATVLTV
Sequences:
>Translated_380_residues MNDVAIIGVGLHPFGRFEKSAMELGADAIQLALKDAGIEWKDIQFGVGGSLEVANPDAVTRLVGLTGIPFTDVFNACATA ASAIQLCADTIRLGKYDIGIAVGMDKHPRGAFTADPSMLGLPSWYAENGQFVTTQFFGIKANRYLHEHGISQRTLAKVAA KNYRNGVLNPNAFRRKPLSEEEILGSPMLNYPLTHYMFCSPDEGAAAAIMCRADIAHRFTSQPIYLRAAEIRTRRFGAYE VHSTFAPVDEDVAPTVYAARAAFEAAGVGPGDVDVIQLQDTDAGAEIIHMAECGFCADGEQEKLLAEGATEINGPLPVNT DGGLIANGEPIGASGLRQVHELVRQLRGQAGDRQVAGNPRVGFAQVYGAPGTAAATVLTV >Mature_380_residues MNDVAIIGVGLHPFGRFEKSAMELGADAIQLALKDAGIEWKDIQFGVGGSLEVANPDAVTRLVGLTGIPFTDVFNACATA ASAIQLCADTIRLGKYDIGIAVGMDKHPRGAFTADPSMLGLPSWYAENGQFVTTQFFGIKANRYLHEHGISQRTLAKVAA KNYRNGVLNPNAFRRKPLSEEEILGSPMLNYPLTHYMFCSPDEGAAAAIMCRADIAHRFTSQPIYLRAAEIRTRRFGAYE VHSTFAPVDEDVAPTVYAARAAFEAAGVGPGDVDVIQLQDTDAGAEIIHMAECGFCADGEQEKLLAEGATEINGPLPVNT DGGLIANGEPIGASGLRQVHELVRQLRGQAGDRQVAGNPRVGFAQVYGAPGTAAATVLTV
Specific function: Unknown
COG id: COG0183
COG function: function code I; Acetyl-CoA acetyltransferase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI19923233, Length=395, Percent_Identity=28.6075949367089, Blast_Score=147, Evalue=1e-35, Organism=Homo sapiens, GI302344760, Length=331, Percent_Identity=30.2114803625378, Blast_Score=143, Evalue=2e-34, Organism=Homo sapiens, GI302344767, Length=324, Percent_Identity=30.2469135802469, Blast_Score=140, Evalue=2e-33, Organism=Homo sapiens, GI302344762, Length=324, Percent_Identity=28.3950617283951, Blast_Score=122, Evalue=5e-28, Organism=Homo sapiens, GI55956775, Length=279, Percent_Identity=26.5232974910394, Blast_Score=96, Evalue=4e-20, Organism=Caenorhabditis elegans, GI17537653, Length=374, Percent_Identity=28.0748663101604, Blast_Score=134, Evalue=6e-32, Organism=Drosophila melanogaster, GI24585051, Length=375, Percent_Identity=29.3333333333333, Blast_Score=149, Evalue=4e-36, Organism=Drosophila melanogaster, GI19921506, Length=371, Percent_Identity=29.9191374663073, Blast_Score=147, Evalue=1e-35,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002155 - InterPro: IPR016039 - InterPro: IPR016038 - InterPro: IPR020617 - InterPro: IPR020616 [H]
Pfam domain/function: PF02803 Thiolase_C; PF00108 Thiolase_N [H]
EC number: NA
Molecular weight: Translated: 40372; Mature: 40372
Theoretical pI: Translated: 5.09; Mature: 5.09
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNDVAIIGVGLHPFGRFEKSAMELGADAIQLALKDAGIEWKDIQFGVGGSLEVANPDAVT CCCEEEEEECCCCCCHHHHHHHHHCHHHHHHHHHHCCCCEEEEEECCCCEEEECCCHHHH RLVGLTGIPFTDVFNACATAASAIQLCADTIRLGKYDIGIAVGMDKHPRGAFTADPSMLG HHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCCCCCC LPSWYAENGQFVTTQFFGIKANRYLHEHGISQRTLAKVAAKNYRNGVLNPNAFRRKPLSE CCCHHCCCCCEEEEEEEEEEHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCHHHHCCCCCH EEILGSPMLNYPLTHYMFCSPDEGAAAAIMCRADIAHRFTSQPIYLRAAEIRTRRFGAYE HHHCCCCCCCCCCCEEEEECCCCCCEEEEEEHHHHHHHHCCCCEEEEEHHHHHHHCCCEE VHSTFAPVDEDVAPTVYAARAAFEAAGVGPGDVDVIQLQDTDAGAEIIHMAECGFCADGE ECCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCEEEEEECCCCCCCCC QEKLLAEGATEINGPLPVNTDGGLIANGEPIGASGLRQVHELVRQLRGQAGDRQVAGNPR HHHHHHCCCHHCCCCCCCCCCCCEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCC VGFAQVYGAPGTAAATVLTV CCEEEEECCCCCCCEEEEEC >Mature Secondary Structure MNDVAIIGVGLHPFGRFEKSAMELGADAIQLALKDAGIEWKDIQFGVGGSLEVANPDAVT CCCEEEEEECCCCCCHHHHHHHHHCHHHHHHHHHHCCCCEEEEEECCCCEEEECCCHHHH RLVGLTGIPFTDVFNACATAASAIQLCADTIRLGKYDIGIAVGMDKHPRGAFTADPSMLG HHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCCCCCC LPSWYAENGQFVTTQFFGIKANRYLHEHGISQRTLAKVAAKNYRNGVLNPNAFRRKPLSE CCCHHCCCCCEEEEEEEEEEHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCHHHHCCCCCH EEILGSPMLNYPLTHYMFCSPDEGAAAAIMCRADIAHRFTSQPIYLRAAEIRTRRFGAYE HHHCCCCCCCCCCCEEEEECCCCCCEEEEEEHHHHHHHHCCCCEEEEEHHHHHHHCCCEE VHSTFAPVDEDVAPTVYAARAAFEAAGVGPGDVDVIQLQDTDAGAEIIHMAECGFCADGE ECCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCEEEEEECCCCCCCCC QEKLLAEGATEINGPLPVNTDGGLIANGEPIGASGLRQVHELVRQLRGQAGDRQVAGNPR HHHHHHCCCHHCCCCCCCCCCCCEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCC VGFAQVYGAPGTAAATVLTV CCEEEEECCCCCCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9371463 [H]