| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158315143
Identifier: 158315143
GI number: 158315143
Start: 3955475
End: 3956332
Strand: Direct
Name: 158315143
Synonym: Franean1_3342
Alternate gene names: NA
Gene position: 3955475-3956332 (Clockwise)
Preceding gene: 158315142
Following gene: 158315145
Centisome position: 44.04
GC content: 72.61
Gene sequence:
>858_bases ATGAGGACCATCGTGATCACCGGAGGGACCGACGGGATCGGCCAGTCCCTCGCCCGCACCCTCCTGGGCCGTGGCGACCA GGTCGTGGTCGTCGGCCGCAACGCCGCCAAGGGAACGGCCTTCCTCGACGCGGCCAACCGGGCCGGCGCTGGCGGCAGGG CGTTCTTCCTCCAGGCGGAGCTGAGCCTCGTCAGCGAGAACGAGAGGGTCGTCGCGTCTGTCACGGAACGGTTCGCCGCG ATAGACGGGCTCGTGCTGGGAGCGCGCCACTACCGTTCCGCCCGTCGCGAGACCTCGGAGGGGTTCGAGGAGAACTTCGC GCTGTTCTACCTCAGCCGGTACGTCCTCGGTCACGGCCTCACCAGCCTGCTGGAGAAGGGCGCCAACCCGGTGATCGTGA ACATTGCGGGCCCCGGGGCGGACATCTCCGTCGTCCGCTGGGACGACCTGCAACTACGGCGCTTCTACCACGGCGGCGCT GCGCTCGGACAGGGCGGCAAGCTCAACGACCTTCTCGGGGTCGCCTTCGTGGCCGCCCACGAACACGGCGCCGTCCGACA GCGGCTCGGCGGCGTCCCGCCTGGAAGCCATCACCCGGCGGCTGCTGGCCCGCGAACCCACCGGCGGACGTCGGTGCGCT GTCGCCGAGTAGGCGGGCACCCTGGCGGCGTGCTCGCCGGTGGCCACGTCGCCGGGGTGGTCGTGCGGCTCAGGACTCGT GGGGGACCGCCTCCACCCGGGGCTCAGGATGCTCGCGGGGGGTGGGCAGCTTCGCGGATTCGGCTGTCGCCGCCGCTGCC GCCCGCGTCGCCGCGAACGCCGCCCGGGCCGGAGCGCGCAGGACGACGAGCGTCGTGA
Upstream 100 bases:
>100_bases CCGCGACCGCGACCGCGACCACGTCGACGTCGACGTCGACGTCGACGTCCGGGACGGTCCCGCCAGCCCTGTCCGCCGCG ACCGCCCAGGAGGGCACCCG
Downstream 100 bases:
>100_bases CGAGCCCGAGCAGGGCGCAGCCGGTACCGATCAGGAAGGCCAGGTGATAGCCGCTGACCAGGGCGGCGACGGCGGAGTGC CCGTGGGCGGTGAGGGTTTT
Product: short-chain dehydrogenase/reductase SDR
Products: NA
Alternate protein names: Oxidoreductase; PPOX Class; Dehydrogenase Family Protein
Number of amino acids: Translated: 285; Mature: 285
Protein sequence:
>285_residues MRTIVITGGTDGIGQSLARTLLGRGDQVVVVGRNAAKGTAFLDAANRAGAGGRAFFLQAELSLVSENERVVASVTERFAA IDGLVLGARHYRSARRETSEGFEENFALFYLSRYVLGHGLTSLLEKGANPVIVNIAGPGADISVVRWDDLQLRRFYHGGA ALGQGGKLNDLLGVAFVAAHEHGAVRQRLGGVPPGSHHPAAAGPRTHRRTSVRCRRVGGHPGGVLAGGHVAGVVVRLRTR GGPPPPGAQDARGGWAASRIRLSPPLPPASPRTPPGPERAGRRAS
Sequences:
>Translated_285_residues MRTIVITGGTDGIGQSLARTLLGRGDQVVVVGRNAAKGTAFLDAANRAGAGGRAFFLQAELSLVSENERVVASVTERFAA IDGLVLGARHYRSARRETSEGFEENFALFYLSRYVLGHGLTSLLEKGANPVIVNIAGPGADISVVRWDDLQLRRFYHGGA ALGQGGKLNDLLGVAFVAAHEHGAVRQRLGGVPPGSHHPAAAGPRTHRRTSVRCRRVGGHPGGVLAGGHVAGVVVRLRTR GGPPPPGAQDARGGWAASRIRLSPPLPPASPRTPPGPERAGRRAS >Mature_285_residues MRTIVITGGTDGIGQSLARTLLGRGDQVVVVGRNAAKGTAFLDAANRAGAGGRAFFLQAELSLVSENERVVASVTERFAA IDGLVLGARHYRSARRETSEGFEENFALFYLSRYVLGHGLTSLLEKGANPVIVNIAGPGADISVVRWDDLQLRRFYHGGA ALGQGGKLNDLLGVAFVAAHEHGAVRQRLGGVPPGSHHPAAAGPRTHRRTSVRCRRVGGHPGGVLAGGHVAGVVVRLRTR GGPPPPGAQDARGGWAASRIRLSPPLPPASPRTPPGPERAGRRAS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29750; Mature: 29750
Theoretical pI: Translated: 12.00; Mature: 12.00
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 0.4 %Met (Translated Protein) 0.7 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 0.4 %Met (Mature Protein) 0.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRTIVITGGTDGIGQSLARTLLGRGDQVVVVGRNAAKGTAFLDAANRAGAGGRAFFLQAE CEEEEEECCCCHHHHHHHHHHHCCCCEEEEECCCCCCCCEEEECCCCCCCCCEEEEEEEE LSLVSENERVVASVTERFAAIDGLVLGARHYRSARRETSEGFEENFALFYLSRYVLGHGL EEECCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH TSLLEKGANPVIVNIAGPGADISVVRWDDLQLRRFYHGGAALGQGGKLNDLLGVAFVAAH HHHHHCCCCEEEEEEECCCCCEEEEEECCHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHC EHGAVRQRLGGVPPGSHHPAAAGPRTHRRTSVRCRRVGGHPGGVLAGGHVAGVVVRLRTR CCHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHEECCCCCCCEEECCHHEEEEEEEECC GGPPPPGAQDARGGWAASRIRLSPPLPPASPRTPPGPERAGRRAS CCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCHHHCCCCCC >Mature Secondary Structure MRTIVITGGTDGIGQSLARTLLGRGDQVVVVGRNAAKGTAFLDAANRAGAGGRAFFLQAE CEEEEEECCCCHHHHHHHHHHHCCCCEEEEECCCCCCCCEEEECCCCCCCCCEEEEEEEE LSLVSENERVVASVTERFAAIDGLVLGARHYRSARRETSEGFEENFALFYLSRYVLGHGL EEECCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH TSLLEKGANPVIVNIAGPGADISVVRWDDLQLRRFYHGGAALGQGGKLNDLLGVAFVAAH HHHHHCCCCEEEEEEECCCCCEEEEEECCHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHC EHGAVRQRLGGVPPGSHHPAAAGPRTHRRTSVRCRRVGGHPGGVLAGGHVAGVVVRLRTR CCHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHEECCCCCCCEEECCHHEEEEEEEECC GGPPPPGAQDARGGWAASRIRLSPPLPPASPRTPPGPERAGRRAS CCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA