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The map label for this gene is dnrI [H]

Identifier: 158315137

GI number: 158315137

Start: 3949584

End: 3950390

Strand: Direct

Name: dnrI [H]

Synonym: Franean1_3336

Alternate gene names: 158315137

Gene position: 3949584-3950390 (Clockwise)

Preceding gene: 158315136

Following gene: 158315139

Centisome position: 43.97

GC content: 69.89

Gene sequence:

>807_bases
TTGAGACGGTTCTGGTGTGCCCACCCCGCCCCGGGCAGCCGGGGCCGGGGCGGGGGCGGGGCTGTCCGGCCGCCGGATGC
GGCCGAGGCGCGAACGTCCGGTGCAGTCGGGCCAGGCCGTCCGCGTTGTCACGTCTGCTCAGTCTGTGGGGCGTGCTCGT
GCGGTACGAAATCCTTGGAGATCTGGAAGGACGATCCCCCGCGGCGCGCGACGGCGACGTTGCAGGTCTACGTCTCCCAA
CTCCGCAAGCTGCTCACCTGCCCGCTGAGCCGGGAGTGCCCGATCATCACCCGTTCGCCGGGCTATCTGCTGCTCGTCGA
GCCCGAGGCCGTCGATCTGCACCTGTTCGAGCGGAGGATGGCGGACGGGCGCCAGCATGCCCGCGCCGGTCACCACCGGC
AGGCGGCCGATCTGTTCGCGTCCGCCCTCACGGTCTGGCGCGGCAACGCGCTCGGCGACCTGCGTGAGGGCCCGATCGTG
GACGCGTTCGTCACCCGGCTGGAGGAGTCACGGCTGGAGTGCATCGAGATGATGATGGAGGCGGGCCTGCGTAGCGGCTG
CCATCGGGAGCTCGTGGGCCAGCTGTTCGAGCTGACCCTGGAACATCCGATGCGGGAGTCCTTCTACCGGCAGCTCATGA
TCGCTCTCTACTGGTCGGAACGGCAGGCCGACGCGCTGCGTGTCTACCAGCGAGCCCGCCAGATCCTCGCGGACGAGCTC
GGTATCGAGCCCGGCCGGCCGCTGCGGGAGATCCAACGCGGGATCCTGGCCGACGACGACCGCTTCGAACTGTTCTCCAC
CGGCTGA

Upstream 100 bases:

>100_bases
GGTGCGGGCCTTCGGCTAGTTCTGGCACGGATGCACTATCGCCTCGGTGCGGCGGCCGGGAATAGGATCTCATCCGGACC
GGACCGGAGCCGGCCGGGAG

Downstream 100 bases:

>100_bases
CCGGCTGACCGGCGTGCGGGCGGTGCGTACGTGCCGCCCGCACGCCGGGCAACGGGTCCGGTCAGCGTGGACCAGCCCCG
TTCACCAGCATCATCAGCGC

Product: SARP family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 268; Mature: 268

Protein sequence:

>268_residues
MRRFWCAHPAPGSRGRGGGGAVRPPDAAEARTSGAVGPGRPRCHVCSVCGACSCGTKSLEIWKDDPPRRATATLQVYVSQ
LRKLLTCPLSRECPIITRSPGYLLLVEPEAVDLHLFERRMADGRQHARAGHHRQAADLFASALTVWRGNALGDLREGPIV
DAFVTRLEESRLECIEMMMEAGLRSGCHRELVGQLFELTLEHPMRESFYRQLMIALYWSERQADALRVYQRARQILADEL
GIEPGRPLREIQRGILADDDRFELFSTG

Sequences:

>Translated_268_residues
MRRFWCAHPAPGSRGRGGGGAVRPPDAAEARTSGAVGPGRPRCHVCSVCGACSCGTKSLEIWKDDPPRRATATLQVYVSQ
LRKLLTCPLSRECPIITRSPGYLLLVEPEAVDLHLFERRMADGRQHARAGHHRQAADLFASALTVWRGNALGDLREGPIV
DAFVTRLEESRLECIEMMMEAGLRSGCHRELVGQLFELTLEHPMRESFYRQLMIALYWSERQADALRVYQRARQILADEL
GIEPGRPLREIQRGILADDDRFELFSTG
>Mature_268_residues
MRRFWCAHPAPGSRGRGGGGAVRPPDAAEARTSGAVGPGRPRCHVCSVCGACSCGTKSLEIWKDDPPRRATATLQVYVSQ
LRKLLTCPLSRECPIITRSPGYLLLVEPEAVDLHLFERRMADGRQHARAGHHRQAADLFASALTVWRGNALGDLREGPIV
DAFVTRLEESRLECIEMMMEAGLRSGCHRELVGQLFELTLEHPMRESFYRQLMIALYWSERQADALRVYQRARQILADEL
GIEPGRPLREIQRGILADDDRFELFSTG

Specific function: May form, with dnrJ a two-component regulatory system for daunorubicin biosynthesis genes [H]

COG id: COG3629

COG function: function code T; DNA-binding transcriptional activator of the SARP family

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the AfsR/DnrI/RedD regulatory family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005158
- InterPro:   IPR001867
- InterPro:   IPR016032
- InterPro:   IPR011990
- InterPro:   IPR011991 [H]

Pfam domain/function: PF03704 BTAD; PF00486 Trans_reg_C [H]

EC number: NA

Molecular weight: Translated: 29989; Mature: 29989

Theoretical pI: Translated: 8.11; Mature: 8.11

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.7 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
6.3 %Cys+Met (Translated Protein)
3.7 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
6.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRRFWCAHPAPGSRGRGGGGAVRPPDAAEARTSGAVGPGRPRCHVCSVCGACSCGTKSLE
CCCEECCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCHHHHHHHCCCCCCCCCEE
IWKDDPPRRATATLQVYVSQLRKLLTCPLSRECPIITRSPGYLLLVEPEAVDLHLFERRM
ECCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCEEECCCCEEEEECCCCHHHHHHHHHH
ADGRQHARAGHHRQAADLFASALTVWRGNALGDLREGPIVDAFVTRLEESRLECIEMMME
HCCHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
AGLRSGCHRELVGQLFELTLEHPMRESFYRQLMIALYWSERQADALRVYQRARQILADEL
HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GIEPGRPLREIQRGILADDDRFELFSTG
CCCCCCCHHHHHHCCCCCCCCCEEEECC
>Mature Secondary Structure
MRRFWCAHPAPGSRGRGGGGAVRPPDAAEARTSGAVGPGRPRCHVCSVCGACSCGTKSLE
CCCEECCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCHHHHHHHCCCCCCCCCEE
IWKDDPPRRATATLQVYVSQLRKLLTCPLSRECPIITRSPGYLLLVEPEAVDLHLFERRM
ECCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCEEECCCCEEEEECCCCHHHHHHHHHH
ADGRQHARAGHHRQAADLFASALTVWRGNALGDLREGPIVDAFVTRLEESRLECIEMMME
HCCHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
AGLRSGCHRELVGQLFELTLEHPMRESFYRQLMIALYWSERQADALRVYQRARQILADEL
HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GIEPGRPLREIQRGILADDDRFELFSTG
CCCCCCCHHHHHHCCCCCCCCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1729206 [H]