| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158315135
Identifier: 158315135
GI number: 158315135
Start: 3947886
End: 3948605
Strand: Direct
Name: 158315135
Synonym: Franean1_3334
Alternate gene names: NA
Gene position: 3947886-3948605 (Clockwise)
Preceding gene: 158315134
Following gene: 158315136
Centisome position: 43.95
GC content: 65.97
Gene sequence:
>720_bases ATGTTGGTCATCGGTGACGACGCCGCGAACGTCGGTGTACTGACATCGACCGCCGCGGCGCTCGCCACGCTGGGCGTGGG CCGGAGCACCGCGTCTCCGGATCATTCTGATCAGGGGGCTCAGGCAGGCCACGCGGATCACGTGGACGCCATCACCCTGA TCGATTTCACCCCGGTGGACCACCGCTACACCGCTGTCCATGCCGAGCTGGGAGCTGTCCTCCCCGGCCTGCGCCGATGG AGCGCCACGCACTGCCTGGAGCGGATCGAGTCCCTCGCGGACCTTGTGCGAAAGAGGCATGCGGACGACGCGTACACCAT GACCTCGATCGCCGACTGCAGGGTGCTCATACTCAACGGCCTGCACCGCTGCCGTGAGCTCGACTCCTCCCCGAAAGGCT ATGGCGCGGCCGGAGTGGGTGTGCCGCTCAGCCATCTGCTGGAGCAGGGCTCCGAAGTAGGCGTCTTCGTCATCGCGACG ATCGACCGTAATGGGCTGCGGCGCGTTCACCGGGATATTCTGAACCAGTTCGGCATCGTACTCACCCGCCGCTACAGTGA CTCTTTCGACGATCGTGTGAGTGCGCTGATCGGACGGCCGACGGCCAGGCTGCGTGACGGCCAGGCGGTGCTGGTCGACG ACGGCAGCCAGACCCGGCTACGCCCGTACGGCATTCCGCCGCCCGGTTGGTTGAAAGCCTTCGGTGGAACACTTCCCTGA
Upstream 100 bases:
>100_bases TCAGTCGACCCCGCCGAAGACGATTCGGATCTGGCTCGGCGAGCCGATGGGGCTGTCGGTACCGGTGCGCGTCGACCTCA CCCCGAGTGCCGATCGCACG
Downstream 100 bases:
>100_bases AGGCTGTTCCGTAACCCGGTTGAATAAGGTTCGGGGTGGCTGGGCCCGGCCCGCCGGCGTCCGGGCGGCTGCGCGCCAGC CGACCTGTCGGTTACCGCAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 239; Mature: 239
Protein sequence:
>239_residues MLVIGDDAANVGVLTSTAAALATLGVGRSTASPDHSDQGAQAGHADHVDAITLIDFTPVDHRYTAVHAELGAVLPGLRRW SATHCLERIESLADLVRKRHADDAYTMTSIADCRVLILNGLHRCRELDSSPKGYGAAGVGVPLSHLLEQGSEVGVFVIAT IDRNGLRRVHRDILNQFGIVLTRRYSDSFDDRVSALIGRPTARLRDGQAVLVDDGSQTRLRPYGIPPPGWLKAFGGTLP
Sequences:
>Translated_239_residues MLVIGDDAANVGVLTSTAAALATLGVGRSTASPDHSDQGAQAGHADHVDAITLIDFTPVDHRYTAVHAELGAVLPGLRRW SATHCLERIESLADLVRKRHADDAYTMTSIADCRVLILNGLHRCRELDSSPKGYGAAGVGVPLSHLLEQGSEVGVFVIAT IDRNGLRRVHRDILNQFGIVLTRRYSDSFDDRVSALIGRPTARLRDGQAVLVDDGSQTRLRPYGIPPPGWLKAFGGTLP >Mature_239_residues MLVIGDDAANVGVLTSTAAALATLGVGRSTASPDHSDQGAQAGHADHVDAITLIDFTPVDHRYTAVHAELGAVLPGLRRW SATHCLERIESLADLVRKRHADDAYTMTSIADCRVLILNGLHRCRELDSSPKGYGAAGVGVPLSHLLEQGSEVGVFVIAT IDRNGLRRVHRDILNQFGIVLTRRYSDSFDDRVSALIGRPTARLRDGQAVLVDDGSQTRLRPYGIPPPGWLKAFGGTLP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25627; Mature: 25627
Theoretical pI: Translated: 7.07; Mature: 7.07
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLVIGDDAANVGVLTSTAAALATLGVGRSTASPDHSDQGAQAGHADHVDAITLIDFTPVD CEEECCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCC HRYTAVHAELGAVLPGLRRWSATHCLERIESLADLVRKRHADDAYTMTSIADCRVLILNG CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH LHRCRELDSSPKGYGAAGVGVPLSHLLEQGSEVGVFVIATIDRNGLRRVHRDILNQFGIV HHHHHHCCCCCCCCCCCCCCCCHHHHHHCCCCCCEEEEEEECCHHHHHHHHHHHHHHHHE LTRRYSDSFDDRVSALIGRPTARLRDGQAVLVDDGSQTRLRPYGIPPPGWLKAFGGTLP EEECCCCCHHHHHHHHHCCCHHHCCCCCEEEEECCCCCCCCCCCCCCCHHHHHCCCCCC >Mature Secondary Structure MLVIGDDAANVGVLTSTAAALATLGVGRSTASPDHSDQGAQAGHADHVDAITLIDFTPVD CEEECCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCC HRYTAVHAELGAVLPGLRRWSATHCLERIESLADLVRKRHADDAYTMTSIADCRVLILNG CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH LHRCRELDSSPKGYGAAGVGVPLSHLLEQGSEVGVFVIATIDRNGLRRVHRDILNQFGIV HHHHHHCCCCCCCCCCCCCCCCHHHHHHCCCCCCEEEEEEECCHHHHHHHHHHHHHHHHE LTRRYSDSFDDRVSALIGRPTARLRDGQAVLVDDGSQTRLRPYGIPPPGWLKAFGGTLP EEECCCCCHHHHHHHHHCCCHHHCCCCCEEEEECCCCCCCCCCCCCCCHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA