Click here to switch to the map view.

The map label for this gene is yukB [H]

Identifier: 158315134

GI number: 158315134

Start: 3945434

End: 3947902

Strand: Direct

Name: yukB [H]

Synonym: Franean1_3333

Alternate gene names: 158315134

Gene position: 3945434-3947902 (Clockwise)

Preceding gene: 158315133

Following gene: 158315135

Centisome position: 43.93

GC content: 68.69

Gene sequence:

>2469_bases
ATGCTCCGAGGTTTTCCCGCCGAGCATTCTGCCTTCGTCGGGACGGCGCTTGCCGGAGAGCGCGACGAAGTGGGCAAGAA
GCGCAGCCAGGCAGTGGCGAAGTGGGCCGACTGGCGCGCGCGAGAGGTCGAGAGCCGGGTGACCGAGGTGCGTGACATCC
TCGTTTCCCGACCGCGATTATGGGAGACCGAGGAAGGCCGCCAGCACGGCCCCGTTCCCGAGCACAGCGCCACGGAGGTC
GTCGACGCGCTGGCGCTGGCCGTTCGTCGCCTGCGCTCGCCGCTGCGAAGCAAACGGCACTGGACCAGGGTCGCGGTAGC
TGCCGTTCGACGCGCTGACGAACTGATCGTACGGGCGACCGAGGACCTCGACGCGCAGGTGCGGACGGCCGCCCAGAACG
CCCGGGCCAGCCACGGCAACGCCGTCGCGGCCGCGAAGCGCCCCTGGCGGCAAAGCCTGGCGCTGTTCCAGGCGGAGGTC
GCCGCGGTCCGCGCCGACCTCGACGGGATCAGTCTGCCGGCGGACGCTGACTGGAGTACGTGGTCCCCGGTCTCCACACC
CGTCGACGGACTGCGAATCGGGTGGTACATCCGGGCCGGGCATGACGGCGGGCAGCTCGTCGTGCCCGCCCTCCTGCCGT
TTCCCCGCACGACCAACCTCGTTGTCAAGGCCGGTCGCGCGAACACCGAACATTCCGACGTCGCGCTCGGCCTGATCGGC
CGGATGCTGGCCTCGATCCCACCCGGCCAGCTGCGGCTGTCGGTTGTCGACTCGATCTCGCTGGGCCGGTCCGTGCGGTC
GCTCTCCGGGCTCAACTCGACTGACGTGCGGCTCATGGAGACCCCGCTCATCGACTATCACGAGATCGAGGGCAGGCTCG
CCGAGCTGGTCGGGCGCATCGGGCGGATCGAACGGGACCTGCTGGGCCCGCACCGGCTGGACTCGCTTGTCGATTACAAC
CAGCTGGTTGACGCGCGTCCTGAGCCATACCACGTCGTGGTGGTTTTCGACTACCCTCGCGGATTCACCACGCCGGACAG
CCTTACCCGGCTCGACCAGGTCATGGCGAACGGCCCTCGGTGCGGTGTCTACACCGTCCTGACGATCACGGACGATGACC
CCGAGCATCCCCACCACCTGGAGCTGGTCGGGGGAGGGCGGGCCAGGCCCGGGCCGGCTGCGGCGGGGTCGCCGGCGGCC
GACCGGTGGGAGCTCGTGCTGGAGCATCCGCGCGAGCCGACCTGGGAGACGTCCCGGATGCTGGGAACGATCGTCGACCG
TGTCGCGGATCGGGCGCGTGACGCCGGCAAGGTGGTTGTCTCCCTGGACCGCGTGTTGTCGCTGGTGCCGGCGGCGACCA
GACCCGAGCTCGGGGGCATCGCCGGTATGGAGCGACCGGTCGACGCGGGCGATCCGGCCACCTGGTGGCAGGGCGATGCC
TCCGACGGGCTCGTGATCCCGATCGGGACGTACAGCCTGGACGACGTCATGGCCATGCGGCTGGGCGAGGGCACCCGCAA
TCACGTCATGGTCGCCGGTACCACCGGCTCGGGAAAGACGACCCTGCTGCACACGATCGTGCTGGCCGCGGCGACTGTCT
ACTCCCCGGCGGAACTGGAACTCTACCTGGTAGACCTGAAGCAGGGCATCGAGTTCCAGGATTATGCCGTCCGGCAGCTG
CCCCATGCCCGCCAGGTGGCCATTCACAGCGAACGCGAGTTCGGCCTGGAAACGATGCGCACACTACTGACGGAGATCGA
CTTCCGTGCGGAGCTCTTCAAAAAATACGGGGTCGAGAATCTCGCCAACTACCGGAGCGCCCGGGCCAGGGCCGCGAACG
GGGCAAGCGACCCACGGCTCGCCCGGATCCTGCTCGTCGTCGACGAGTTCCACGTCCTGTTCGACGTCGACGACGCGGTC
GGCCGGGACGCGGCGGCCAGCCTGGAGACCCTCGTCCGCATGGGTCGGGCGTACGGGATCCACGTACTGCTCTCGTCGCA
GACGCCGAGCAGCCCGGTCGTCATGGGCGGTAGCACCGTCCGGCAGATGGAGGTACGGGTCGCGCTGCGCTGCGACGACC
AGGTCAGCCGCCGGGTACTCGCCGAGAACAATCCCAGCGCCAGTCAGCTGGGCCTTCGGGGTGAAGCGATTTATAATCCC
AGCTCGGGCCAGCTCGGTCGTGACACGAAGTTCCAGATCGCCTTCATCGAGGCCGGCACCCGCACGGCGATGCTCGGGGC
CATGCGCAAGCTCGCCCACGTACGGCACCACGTCCGTGTTCCCGCGGTGTACGACGGTGACCGGCCCGGTGACATCACCC
GTGACGGGATTCTTCGAAAAGCTGGTCCGTGCTCAGTCGACCCCGCCGAAGACGATTCGGATCTGGCTCGGCGAGCCGAT
GGGGCTGTCGGTACCGGTGCGCGTCGACCTCACCCCGAGTGCCGATCGCACGATGTTGGTCATCGGTGA

Upstream 100 bases:

>100_bases
CGCCAGCGCGCCCAGGCGTTCGCCTTCGGCTACCTGCGCGACAGCGACACCTGCTACCGCCTCGGCGAGTCACCCACCGG
CAGCGTGCTCTTCTGAGCTG

Downstream 100 bases:

>100_bases
CGACGCCGCGAACGTCGGTGTACTGACATCGACCGCCGCGGCGCTCGCCACGCTGGGCGTGGGCCGGAGCACCGCGTCTC
CGGATCATTCTGATCAGGGG

Product: cell division protein FtsK/SpoIIIE

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 822; Mature: 822

Protein sequence:

>822_residues
MLRGFPAEHSAFVGTALAGERDEVGKKRSQAVAKWADWRAREVESRVTEVRDILVSRPRLWETEEGRQHGPVPEHSATEV
VDALALAVRRLRSPLRSKRHWTRVAVAAVRRADELIVRATEDLDAQVRTAAQNARASHGNAVAAAKRPWRQSLALFQAEV
AAVRADLDGISLPADADWSTWSPVSTPVDGLRIGWYIRAGHDGGQLVVPALLPFPRTTNLVVKAGRANTEHSDVALGLIG
RMLASIPPGQLRLSVVDSISLGRSVRSLSGLNSTDVRLMETPLIDYHEIEGRLAELVGRIGRIERDLLGPHRLDSLVDYN
QLVDARPEPYHVVVVFDYPRGFTTPDSLTRLDQVMANGPRCGVYTVLTITDDDPEHPHHLELVGGGRARPGPAAAGSPAA
DRWELVLEHPREPTWETSRMLGTIVDRVADRARDAGKVVVSLDRVLSLVPAATRPELGGIAGMERPVDAGDPATWWQGDA
SDGLVIPIGTYSLDDVMAMRLGEGTRNHVMVAGTTGSGKTTLLHTIVLAAATVYSPAELELYLVDLKQGIEFQDYAVRQL
PHARQVAIHSEREFGLETMRTLLTEIDFRAELFKKYGVENLANYRSARARAANGASDPRLARILLVVDEFHVLFDVDDAV
GRDAAASLETLVRMGRAYGIHVLLSSQTPSSPVVMGGSTVRQMEVRVALRCDDQVSRRVLAENNPSASQLGLRGEAIYNP
SSGQLGRDTKFQIAFIEAGTRTAMLGAMRKLAHVRHHVRVPAVYDGDRPGDITRDGILRKAGPCSVDPAEDDSDLARRAD
GAVGTGARRPHPECRSHDVGHR

Sequences:

>Translated_822_residues
MLRGFPAEHSAFVGTALAGERDEVGKKRSQAVAKWADWRAREVESRVTEVRDILVSRPRLWETEEGRQHGPVPEHSATEV
VDALALAVRRLRSPLRSKRHWTRVAVAAVRRADELIVRATEDLDAQVRTAAQNARASHGNAVAAAKRPWRQSLALFQAEV
AAVRADLDGISLPADADWSTWSPVSTPVDGLRIGWYIRAGHDGGQLVVPALLPFPRTTNLVVKAGRANTEHSDVALGLIG
RMLASIPPGQLRLSVVDSISLGRSVRSLSGLNSTDVRLMETPLIDYHEIEGRLAELVGRIGRIERDLLGPHRLDSLVDYN
QLVDARPEPYHVVVVFDYPRGFTTPDSLTRLDQVMANGPRCGVYTVLTITDDDPEHPHHLELVGGGRARPGPAAAGSPAA
DRWELVLEHPREPTWETSRMLGTIVDRVADRARDAGKVVVSLDRVLSLVPAATRPELGGIAGMERPVDAGDPATWWQGDA
SDGLVIPIGTYSLDDVMAMRLGEGTRNHVMVAGTTGSGKTTLLHTIVLAAATVYSPAELELYLVDLKQGIEFQDYAVRQL
PHARQVAIHSEREFGLETMRTLLTEIDFRAELFKKYGVENLANYRSARARAANGASDPRLARILLVVDEFHVLFDVDDAV
GRDAAASLETLVRMGRAYGIHVLLSSQTPSSPVVMGGSTVRQMEVRVALRCDDQVSRRVLAENNPSASQLGLRGEAIYNP
SSGQLGRDTKFQIAFIEAGTRTAMLGAMRKLAHVRHHVRVPAVYDGDRPGDITRDGILRKAGPCSVDPAEDDSDLARRAD
GAVGTGARRPHPECRSHDVGHR
>Mature_822_residues
MLRGFPAEHSAFVGTALAGERDEVGKKRSQAVAKWADWRAREVESRVTEVRDILVSRPRLWETEEGRQHGPVPEHSATEV
VDALALAVRRLRSPLRSKRHWTRVAVAAVRRADELIVRATEDLDAQVRTAAQNARASHGNAVAAAKRPWRQSLALFQAEV
AAVRADLDGISLPADADWSTWSPVSTPVDGLRIGWYIRAGHDGGQLVVPALLPFPRTTNLVVKAGRANTEHSDVALGLIG
RMLASIPPGQLRLSVVDSISLGRSVRSLSGLNSTDVRLMETPLIDYHEIEGRLAELVGRIGRIERDLLGPHRLDSLVDYN
QLVDARPEPYHVVVVFDYPRGFTTPDSLTRLDQVMANGPRCGVYTVLTITDDDPEHPHHLELVGGGRARPGPAAAGSPAA
DRWELVLEHPREPTWETSRMLGTIVDRVADRARDAGKVVVSLDRVLSLVPAATRPELGGIAGMERPVDAGDPATWWQGDA
SDGLVIPIGTYSLDDVMAMRLGEGTRNHVMVAGTTGSGKTTLLHTIVLAAATVYSPAELELYLVDLKQGIEFQDYAVRQL
PHARQVAIHSEREFGLETMRTLLTEIDFRAELFKKYGVENLANYRSARARAANGASDPRLARILLVVDEFHVLFDVDDAV
GRDAAASLETLVRMGRAYGIHVLLSSQTPSSPVVMGGSTVRQMEVRVALRCDDQVSRRVLAENNPSASQLGLRGEAIYNP
SSGQLGRDTKFQIAFIEAGTRTAMLGAMRKLAHVRHHVRVPAVYDGDRPGDITRDGILRKAGPCSVDPAEDDSDLARRAD
GAVGTGARRPHPECRSHDVGHR

Specific function: DNA Motor Protein, Which Is Both Required To Move DNA Out Of The Region Of The Septum During Cell Division And For The Septum Formation. Tracks DNA In An ATP-Dependent Manner By Generating Positive Supercoils In Front Of It And Negative Supercoils Behind

COG id: COG1674

COG function: function code D; DNA segregation ATPase FtsK/SpoIIIE and related proteins

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 FtsK domains [H]

Homologues:

Organism=Escherichia coli, GI1787117, Length=231, Percent_Identity=26.4069264069264, Blast_Score=73, Evalue=7e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002543
- InterPro:   IPR022206 [H]

Pfam domain/function: PF01580 FtsK_SpoIIIE; PF12538 FtsK_SpoIIIE_N [H]

EC number: NA

Molecular weight: Translated: 89688; Mature: 89688

Theoretical pI: Translated: 7.11; Mature: 7.11

Prosite motif: PS50901 FTSK

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLRGFPAEHSAFVGTALAGERDEVGKKRSQAVAKWADWRAREVESRVTEVRDILVSRPRL
CCCCCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
WETEEGRQHGPVPEHSATEVVDALALAVRRLRSPLRSKRHWTRVAVAAVRRADELIVRAT
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECC
EDLDAQVRTAAQNARASHGNAVAAAKRPWRQSLALFQAEVAAVRADLDGISLPADADWST
CHHHHHHHHHHHHCCCCCCCEEHHHHCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
WSPVSTPVDGLRIGWYIRAGHDGGQLVVPALLPFPRTTNLVVKAGRANTEHSDVALGLIG
CCCCCCCCCCEEEEEEEEECCCCCCEEEEECCCCCCCCCEEEECCCCCCCCHHHHHHHHH
RMLASIPPGQLRLSVVDSISLGRSVRSLSGLNSTDVRLMETPLIDYHEIEGRLAELVGRI
HHHHHCCCCCEEEEEHHHHHHHHHHHHHCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHH
GRIERDLLGPHRLDSLVDYNQLVDARPEPYHVVVVFDYPRGFTTPDSLTRLDQVMANGPR
HHHHHHHCCHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCCHHHHHHHHHHHHCCCC
CGVYTVLTITDDDPEHPHHLELVGGGRARPGPAAAGSPAADRWELVLEHPREPTWETSRM
CCEEEEEEEECCCCCCCCEEEEEECCCCCCCCCCCCCCCCHHHHHHHHCCCCCCHHHHHH
LGTIVDRVADRARDAGKVVVSLDRVLSLVPAATRPELGGIAGMERPVDAGDPATWWQGDA
HHHHHHHHHHHHHCCCHHEEEHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
SDGLVIPIGTYSLDDVMAMRLGEGTRNHVMVAGTTGSGKTTLLHTIVLAAATVYSPAELE
CCCEEEEECCCCHHHHHHHHHCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHCCCCCEE
LYLVDLKQGIEFQDYAVRQLPHARQVAIHSEREFGLETMRTLLTEIDFRAELFKKYGVEN
EEEEEHHCCCCHHHHHHHHCCCHHHHEECCHHHHHHHHHHHHHHHHHHHHHHHHHHCHHH
LANYRSARARAANGASDPRLARILLVVDEFHVLFDVDDAVGRDAAASLETLVRMGRAYGI
HHHHHHHHHHCCCCCCCHHHEEEEEEEECEEEEEECCHHHCCHHHHHHHHHHHHCCCCEE
HVLLSSQTPSSPVVMGGSTVRQMEVRVALRCDDQVSRRVLAENNPSASQLGLRGEAIYNP
EEEEECCCCCCCEEECCCCEEEEEEEEEEECCHHHHHHHHHCCCCCHHHCCCCCCEEECC
SSGQLGRDTKFQIAFIEAGTRTAMLGAMRKLAHVRHHVRVPAVYDGDRPGDITRDGILRK
CCCCCCCCCEEEEEEEECCCHHHHHHHHHHHHHHHHHEECCEEECCCCCCCCCHHCCHHC
AGPCSVDPAEDDSDLARRADGAVGTGARRPHPECRSHDVGHR
CCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MLRGFPAEHSAFVGTALAGERDEVGKKRSQAVAKWADWRAREVESRVTEVRDILVSRPRL
CCCCCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
WETEEGRQHGPVPEHSATEVVDALALAVRRLRSPLRSKRHWTRVAVAAVRRADELIVRAT
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECC
EDLDAQVRTAAQNARASHGNAVAAAKRPWRQSLALFQAEVAAVRADLDGISLPADADWST
CHHHHHHHHHHHHCCCCCCCEEHHHHCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
WSPVSTPVDGLRIGWYIRAGHDGGQLVVPALLPFPRTTNLVVKAGRANTEHSDVALGLIG
CCCCCCCCCCEEEEEEEEECCCCCCEEEEECCCCCCCCCEEEECCCCCCCCHHHHHHHHH
RMLASIPPGQLRLSVVDSISLGRSVRSLSGLNSTDVRLMETPLIDYHEIEGRLAELVGRI
HHHHHCCCCCEEEEEHHHHHHHHHHHHHCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHH
GRIERDLLGPHRLDSLVDYNQLVDARPEPYHVVVVFDYPRGFTTPDSLTRLDQVMANGPR
HHHHHHHCCHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCCHHHHHHHHHHHHCCCC
CGVYTVLTITDDDPEHPHHLELVGGGRARPGPAAAGSPAADRWELVLEHPREPTWETSRM
CCEEEEEEEECCCCCCCCEEEEEECCCCCCCCCCCCCCCCHHHHHHHHCCCCCCHHHHHH
LGTIVDRVADRARDAGKVVVSLDRVLSLVPAATRPELGGIAGMERPVDAGDPATWWQGDA
HHHHHHHHHHHHHCCCHHEEEHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
SDGLVIPIGTYSLDDVMAMRLGEGTRNHVMVAGTTGSGKTTLLHTIVLAAATVYSPAELE
CCCEEEEECCCCHHHHHHHHHCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHCCCCCEE
LYLVDLKQGIEFQDYAVRQLPHARQVAIHSEREFGLETMRTLLTEIDFRAELFKKYGVEN
EEEEEHHCCCCHHHHHHHHCCCHHHHEECCHHHHHHHHHHHHHHHHHHHHHHHHHHCHHH
LANYRSARARAANGASDPRLARILLVVDEFHVLFDVDDAVGRDAAASLETLVRMGRAYGI
HHHHHHHHHHCCCCCCCHHHEEEEEEEECEEEEEECCHHHCCHHHHHHHHHHHHCCCCEE
HVLLSSQTPSSPVVMGGSTVRQMEVRVALRCDDQVSRRVLAENNPSASQLGLRGEAIYNP
EEEEECCCCCCCEEECCCCEEEEEEEEEEECCHHHHHHHHHCCCCCHHHCCCCCCEEECC
SSGQLGRDTKFQIAFIEAGTRTAMLGAMRKLAHVRHHVRVPAVYDGDRPGDITRDGILRK
CCCCCCCCCEEEEEEEECCCHHHHHHHHHHHHHHHHHEECCEEECCCCCCCCCHHCCHHC
AGPCSVDPAEDDSDLARRADGAVGTGARRPHPECRSHDVGHR
CCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9384377; 9168598 [H]