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The map label for this gene is mmgC [H]

Identifier: 158314954

GI number: 158314954

Start: 3702942

End: 3704090

Strand: Direct

Name: mmgC [H]

Synonym: Franean1_3147

Alternate gene names: 158314954

Gene position: 3702942-3704090 (Clockwise)

Preceding gene: 158314953

Following gene: 158314955

Centisome position: 41.23

GC content: 64.32

Gene sequence:

>1149_bases
ATGAAACGCACGCTTTACACCGAAGACCACGAGATCTACCGGCAGACCGTCCAGGAGTTCCTCGAGCGCGAGATTGTCCC
CCATAAGGACCGCTGGGACGACGAGGGCATGATCGACCGCGGCGTCTACGGATCCGCCGCGCAGACAGGGCTCCACGCGC
TCGCCGTCCCCGAGGAGTACGGCGGCGCGGGCGAGCGGGACTTCCGCTACCGACTGGTCGTCTGCGAGGAGATCGGACGG
ATCAACGCCCTGTCGTTCGGGCTCACTCTGAGCGTTCAGGACGACCTCGTGCTGGCCTACCTGGCCGATCTGACCAACAA
TGAGCAGCGTAAGCGCTGGCTTCCCGGGTTCGCCTCCGGCCAGCTCCTCGGCGCTCTTGCCATGACCGAACCGGGGGCGG
GTAGTGACCTGCGCGGAATATGCACCTCGGCTAGGCGCGACGGTAACAGCTGGGTGATCAACGGGCAGAAGACTTTCATC
TCCAACGGTATCAGCGCAGATCTGATTGTCCTCGCGGCCTGCACCGACCCCGACGCCGGGTCACGCGGATTCAGTCTGTT
CGTCGTCGAGCGCGACACCCCCGGCTTCGATCGCGGGTGCAGGCTCGACAAAATCGGTCTCTCGGGTCAGGACACCGCCG
AACTGTTCTTCGGCGATGCGCGGGTGCCCGCCGAGAACCTGCTGGGTGAAGAGGGTCGCGGCCTGCAGTACCTGATGAGC
CACCTGCCCCGCGAACGCCTGGGGATCACCGCCATGGCGATCGGATCGGCTCGCGCGATCTTTGATGCGACGCTCGAGTA
CTGCAAGCAACGCTCGGCCTTCGGTCGACCCATCTCGGACTTCCAGAACACCCGGTTCGAGCTTGCGACGATGGCCACCG
AGCTCGACCTCGCCGAGACATACGTCGACGCGTCGGTGCGTGCCTACAACGAGGGCACGCTCTCTCCCGTGGATGCGGCC
AAGGGTAAATGGTGGATCACCGAACTGCAGAGACGCGTGATCGACCGGTGCCTTCAACTCCACGGTGGTTACGGTTTCAT
GCGCGAGTACCCGGTCGGCAGGGCCTTCGTCGACTCTCGCGTCCAGACGATCTATGGCGGGACGACCGAGATCATGAAGG
ACCTGATCGGCCGCGACCTCACAAGGTGA

Upstream 100 bases:

>100_bases
AAGGAGTTTCCGTAGACCGCCTCGGGCAAGATCCAGAAATTTGTCCTGCGAGACCAGTACATGGCCGAGGCTGAGGACTC
TGGACCGGAAGGACTCTAGT

Downstream 100 bases:

>100_bases
CGTAAAGCTGTGAGTGTCTTGGACGATCTACTGGCGGACGTCGCAATCGAGAGCGACCGGCTCCGCACGACGGTGGCCAG
CCTCGACACGTCGGGCTGGC

Product: acyl-CoA dehydrogenase domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 382; Mature: 382

Protein sequence:

>382_residues
MKRTLYTEDHEIYRQTVQEFLEREIVPHKDRWDDEGMIDRGVYGSAAQTGLHALAVPEEYGGAGERDFRYRLVVCEEIGR
INALSFGLTLSVQDDLVLAYLADLTNNEQRKRWLPGFASGQLLGALAMTEPGAGSDLRGICTSARRDGNSWVINGQKTFI
SNGISADLIVLAACTDPDAGSRGFSLFVVERDTPGFDRGCRLDKIGLSGQDTAELFFGDARVPAENLLGEEGRGLQYLMS
HLPRERLGITAMAIGSARAIFDATLEYCKQRSAFGRPISDFQNTRFELATMATELDLAETYVDASVRAYNEGTLSPVDAA
KGKWWITELQRRVIDRCLQLHGGYGFMREYPVGRAFVDSRVQTIYGGTTEIMKDLIGRDLTR

Sequences:

>Translated_382_residues
MKRTLYTEDHEIYRQTVQEFLEREIVPHKDRWDDEGMIDRGVYGSAAQTGLHALAVPEEYGGAGERDFRYRLVVCEEIGR
INALSFGLTLSVQDDLVLAYLADLTNNEQRKRWLPGFASGQLLGALAMTEPGAGSDLRGICTSARRDGNSWVINGQKTFI
SNGISADLIVLAACTDPDAGSRGFSLFVVERDTPGFDRGCRLDKIGLSGQDTAELFFGDARVPAENLLGEEGRGLQYLMS
HLPRERLGITAMAIGSARAIFDATLEYCKQRSAFGRPISDFQNTRFELATMATELDLAETYVDASVRAYNEGTLSPVDAA
KGKWWITELQRRVIDRCLQLHGGYGFMREYPVGRAFVDSRVQTIYGGTTEIMKDLIGRDLTR
>Mature_382_residues
MKRTLYTEDHEIYRQTVQEFLEREIVPHKDRWDDEGMIDRGVYGSAAQTGLHALAVPEEYGGAGERDFRYRLVVCEEIGR
INALSFGLTLSVQDDLVLAYLADLTNNEQRKRWLPGFASGQLLGALAMTEPGAGSDLRGICTSARRDGNSWVINGQKTFI
SNGISADLIVLAACTDPDAGSRGFSLFVVERDTPGFDRGCRLDKIGLSGQDTAELFFGDARVPAENLLGEEGRGLQYLMS
HLPRERLGITAMAIGSARAIFDATLEYCKQRSAFGRPISDFQNTRFELATMATELDLAETYVDASVRAYNEGTLSPVDAA
KGKWWITELQRRVIDRCLQLHGGYGFMREYPVGRAFVDSRVQTIYGGTTEIMKDLIGRDLTR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the acyl-CoA dehydrogenase family [H]

Homologues:

Organism=Homo sapiens, GI4501857, Length=381, Percent_Identity=41.994750656168, Blast_Score=337, Evalue=2e-92,
Organism=Homo sapiens, GI4557233, Length=377, Percent_Identity=35.8090185676393, Blast_Score=232, Evalue=4e-61,
Organism=Homo sapiens, GI226958412, Length=376, Percent_Identity=34.8404255319149, Blast_Score=228, Evalue=5e-60,
Organism=Homo sapiens, GI4501859, Length=375, Percent_Identity=30.9333333333333, Blast_Score=219, Evalue=4e-57,
Organism=Homo sapiens, GI226958414, Length=331, Percent_Identity=36.5558912386707, Blast_Score=218, Evalue=1e-56,
Organism=Homo sapiens, GI7656849, Length=381, Percent_Identity=30.7086614173228, Blast_Score=189, Evalue=4e-48,
Organism=Homo sapiens, GI4557231, Length=382, Percent_Identity=30.8900523560209, Blast_Score=183, Evalue=3e-46,
Organism=Homo sapiens, GI187960098, Length=382, Percent_Identity=30.8900523560209, Blast_Score=182, Evalue=4e-46,
Organism=Homo sapiens, GI76496475, Length=371, Percent_Identity=32.8840970350404, Blast_Score=174, Evalue=1e-43,
Organism=Homo sapiens, GI4557235, Length=371, Percent_Identity=32.8840970350404, Blast_Score=174, Evalue=1e-43,
Organism=Homo sapiens, GI21361497, Length=371, Percent_Identity=30.9973045822102, Blast_Score=168, Evalue=9e-42,
Organism=Homo sapiens, GI4503943, Length=385, Percent_Identity=27.2727272727273, Blast_Score=107, Evalue=2e-23,
Organism=Homo sapiens, GI48976061, Length=391, Percent_Identity=26.8542199488491, Blast_Score=100, Evalue=3e-21,
Organism=Homo sapiens, GI211971008, Length=391, Percent_Identity=26.8542199488491, Blast_Score=100, Evalue=3e-21,
Organism=Homo sapiens, GI7669494, Length=294, Percent_Identity=28.2312925170068, Blast_Score=99, Evalue=8e-21,
Organism=Homo sapiens, GI38505218, Length=381, Percent_Identity=24.9343832020997, Blast_Score=86, Evalue=5e-17,
Organism=Escherichia coli, GI87081958, Length=379, Percent_Identity=30.6068601583113, Blast_Score=150, Evalue=1e-37,
Organism=Escherichia coli, GI1786223, Length=336, Percent_Identity=27.0833333333333, Blast_Score=124, Evalue=8e-30,
Organism=Escherichia coli, GI87082384, Length=271, Percent_Identity=26.9372693726937, Blast_Score=66, Evalue=3e-12,
Organism=Caenorhabditis elegans, GI17538396, Length=378, Percent_Identity=34.1269841269841, Blast_Score=236, Evalue=1e-62,
Organism=Caenorhabditis elegans, GI17551932, Length=384, Percent_Identity=33.0729166666667, Blast_Score=213, Evalue=1e-55,
Organism=Caenorhabditis elegans, GI17508101, Length=363, Percent_Identity=31.404958677686, Blast_Score=208, Evalue=4e-54,
Organism=Caenorhabditis elegans, GI17505929, Length=380, Percent_Identity=33.4210526315789, Blast_Score=206, Evalue=1e-53,
Organism=Caenorhabditis elegans, GI17569725, Length=381, Percent_Identity=31.496062992126, Blast_Score=196, Evalue=1e-50,
Organism=Caenorhabditis elegans, GI17506239, Length=374, Percent_Identity=30.4812834224599, Blast_Score=194, Evalue=7e-50,
Organism=Caenorhabditis elegans, GI17534899, Length=387, Percent_Identity=30.749354005168, Blast_Score=190, Evalue=1e-48,
Organism=Caenorhabditis elegans, GI17570075, Length=377, Percent_Identity=31.2997347480106, Blast_Score=189, Evalue=2e-48,
Organism=Caenorhabditis elegans, GI17533517, Length=375, Percent_Identity=32.5333333333333, Blast_Score=187, Evalue=1e-47,
Organism=Caenorhabditis elegans, GI71990804, Length=278, Percent_Identity=35.2517985611511, Blast_Score=177, Evalue=1e-44,
Organism=Caenorhabditis elegans, GI71985184, Length=371, Percent_Identity=30.9973045822102, Blast_Score=165, Evalue=3e-41,
Organism=Caenorhabditis elegans, GI71982178, Length=275, Percent_Identity=30.1818181818182, Blast_Score=143, Evalue=2e-34,
Organism=Caenorhabditis elegans, GI32563615, Length=233, Percent_Identity=34.7639484978541, Blast_Score=143, Evalue=2e-34,
Organism=Caenorhabditis elegans, GI71985192, Length=328, Percent_Identity=30.4878048780488, Blast_Score=139, Evalue=3e-33,
Organism=Caenorhabditis elegans, GI17534353, Length=378, Percent_Identity=27.7777777777778, Blast_Score=128, Evalue=4e-30,
Organism=Caenorhabditis elegans, GI17531909, Length=237, Percent_Identity=26.1603375527426, Blast_Score=100, Evalue=2e-21,
Organism=Caenorhabditis elegans, GI17562446, Length=335, Percent_Identity=27.1641791044776, Blast_Score=90, Evalue=2e-18,
Organism=Caenorhabditis elegans, GI86563381, Length=271, Percent_Identity=27.3062730627306, Blast_Score=70, Evalue=2e-12,
Organism=Caenorhabditis elegans, GI86563383, Length=271, Percent_Identity=27.3062730627306, Blast_Score=70, Evalue=2e-12,
Organism=Drosophila melanogaster, GI24666513, Length=379, Percent_Identity=33.245382585752, Blast_Score=234, Evalue=6e-62,
Organism=Drosophila melanogaster, GI21356377, Length=376, Percent_Identity=30.5851063829787, Blast_Score=208, Evalue=6e-54,
Organism=Drosophila melanogaster, GI21355753, Length=381, Percent_Identity=33.3333333333333, Blast_Score=203, Evalue=2e-52,
Organism=Drosophila melanogaster, GI24660351, Length=383, Percent_Identity=32.6370757180157, Blast_Score=189, Evalue=3e-48,
Organism=Drosophila melanogaster, GI24646207, Length=376, Percent_Identity=28.9893617021277, Blast_Score=175, Evalue=4e-44,
Organism=Drosophila melanogaster, GI281363737, Length=364, Percent_Identity=31.043956043956, Blast_Score=162, Evalue=3e-40,
Organism=Drosophila melanogaster, GI19920834, Length=389, Percent_Identity=28.2776349614396, Blast_Score=121, Evalue=8e-28,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006089
- InterPro:   IPR006092
- InterPro:   IPR006090
- InterPro:   IPR006091
- InterPro:   IPR009075
- InterPro:   IPR013786
- InterPro:   IPR009100 [H]

Pfam domain/function: PF00441 Acyl-CoA_dh_1; PF02770 Acyl-CoA_dh_M; PF02771 Acyl-CoA_dh_N [H]

EC number: NA

Molecular weight: Translated: 42436; Mature: 42436

Theoretical pI: Translated: 4.91; Mature: 4.91

Prosite motif: PS00072 ACYL_COA_DH_1 ; PS00073 ACYL_COA_DH_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRTLYTEDHEIYRQTVQEFLEREIVPHKDRWDDEGMIDRGVYGSAAQTGLHALAVPEEY
CCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHCCEEEECCHHH
GGAGERDFRYRLVVCEEIGRINALSFGLTLSVQDDLVLAYLADLTNNEQRKRWLPGFASG
CCCCCCCCEEEEEEEHHCCCCEEEEEEEEEEECCHHHHHHHHHHCCCHHHHHHCCCCCCC
QLLGALAMTEPGAGSDLRGICTSARRDGNSWVINGQKTFISNGISADLIVLAACTDPDAG
HHHEEEEECCCCCCCCHHHHHHHHCCCCCCEEECCCHHHHCCCCCEEEEEEEEECCCCCC
SRGFSLFVVERDTPGFDRGCRLDKIGLSGQDTAELFFGDARVPAENLLGEEGRGLQYLMS
CCCEEEEEEECCCCCCCCCCEEEECCCCCCCCHHEEECCCCCCHHHHCCCCCCCHHHHHH
HLPRERLGITAMAIGSARAIFDATLEYCKQRSAFGRPISDFQNTRFELATMATELDLAET
HCCHHHHCEEEEECCCHHHHHHHHHHHHHHHHHCCCCHHHHHCCHHHHHHHHHHHHHHHH
YVDASVRAYNEGTLSPVDAAKGKWWITELQRRVIDRCLQLHGGYGFMREYPVGRAFVDSR
HHHHHHEECCCCCCCCCHHCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHCCCCHHHHHHH
VQTIYGGTTEIMKDLIGRDLTR
HHHHCCCHHHHHHHHHCCCCCC
>Mature Secondary Structure
MKRTLYTEDHEIYRQTVQEFLEREIVPHKDRWDDEGMIDRGVYGSAAQTGLHALAVPEEY
CCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHCCEEEECCHHH
GGAGERDFRYRLVVCEEIGRINALSFGLTLSVQDDLVLAYLADLTNNEQRKRWLPGFASG
CCCCCCCCEEEEEEEHHCCCCEEEEEEEEEEECCHHHHHHHHHHCCCHHHHHHCCCCCCC
QLLGALAMTEPGAGSDLRGICTSARRDGNSWVINGQKTFISNGISADLIVLAACTDPDAG
HHHEEEEECCCCCCCCHHHHHHHHCCCCCCEEECCCHHHHCCCCCEEEEEEEEECCCCCC
SRGFSLFVVERDTPGFDRGCRLDKIGLSGQDTAELFFGDARVPAENLLGEEGRGLQYLMS
CCCEEEEEEECCCCCCCCCCEEEECCCCCCCCHHEEECCCCCCHHHHCCCCCCCHHHHHH
HLPRERLGITAMAIGSARAIFDATLEYCKQRSAFGRPISDFQNTRFELATMATELDLAET
HCCHHHHCEEEEECCCHHHHHHHHHHHHHHHHHCCCCHHHHHCCHHHHHHHHHHHHHHHH
YVDASVRAYNEGTLSPVDAAKGKWWITELQRRVIDRCLQLHGGYGFMREYPVGRAFVDSR
HHHHHHEECCCCCCCCCHHCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHCCCCHHHHHHH
VQTIYGGTTEIMKDLIGRDLTR
HHHHCCCHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8759838; 8969508; 9384377 [H]