| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158314918
Identifier: 158314918
GI number: 158314918
Start: 3665898
End: 3666311
Strand: Direct
Name: 158314918
Synonym: Franean1_3108
Alternate gene names: NA
Gene position: 3665898-3666311 (Clockwise)
Preceding gene: 158314917
Following gene: 158314919
Centisome position: 40.81
GC content: 70.29
Gene sequence:
>414_bases GTGCTCACCCGCTCCGTGACCCGCGCCGGCACCCAGCTCGCCACCGCCGACCCCGGGATCAGCTACACCGCCGGCGCCGC CGTCTGGCTGCGTATGCGCGTCGTCGGCCACCAGATCCTCGGCCGCCTCTGGCCTGCCACCCAGAGCGAACCGGGCTTCT GGCAGATCAGCACAACCGTCACCACCGACCCGATCGACACCGGCCGGGCCGGGCTAGTCGGCAGCTACTTCTCCGGCAAC ACCAACGTCAACCCGACGCTGTCGTTCGACGACTTCCGAACGATCACCGTGCAGCGGCTGACCGTCACCCGGGCCATCAA CACGGTCAGCCGCAGCTGGCCGGCCGGCACCGATGTCCGCCTCGAGGCAGACATGGCAGCGCACCTCCGGACACACGGCG GGAGCAGCTCGTGA
Upstream 100 bases:
>100_bases CTACTGAAGGAGATGCCATGAAAAAGATCGCTCTCATTCTCGCTGTCATCGCCGCCTGCCTGGCCGTAGGCACCGTGGCG GCGCGAGCCAGACCACCGGC
Downstream 100 bases:
>100_bases CCACCACCCTGTGGGTGCCGGAAACTGGGGACTGTGTCGCCAAGCGGACAACGATCCGATCGTGCTCGCGCACGCTCGCG CTCTACTCACCGGCAGTGGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 137; Mature: 137
Protein sequence:
>137_residues MLTRSVTRAGTQLATADPGISYTAGAAVWLRMRVVGHQILGRLWPATQSEPGFWQISTTVTTDPIDTGRAGLVGSYFSGN TNVNPTLSFDDFRTITVQRLTVTRAINTVSRSWPAGTDVRLEADMAAHLRTHGGSSS
Sequences:
>Translated_137_residues MLTRSVTRAGTQLATADPGISYTAGAAVWLRMRVVGHQILGRLWPATQSEPGFWQISTTVTTDPIDTGRAGLVGSYFSGN TNVNPTLSFDDFRTITVQRLTVTRAINTVSRSWPAGTDVRLEADMAAHLRTHGGSSS >Mature_137_residues MLTRSVTRAGTQLATADPGISYTAGAAVWLRMRVVGHQILGRLWPATQSEPGFWQISTTVTTDPIDTGRAGLVGSYFSGN TNVNPTLSFDDFRTITVQRLTVTRAINTVSRSWPAGTDVRLEADMAAHLRTHGGSSS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14735; Mature: 14735
Theoretical pI: Translated: 10.89; Mature: 10.89
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLTRSVTRAGTQLATADPGISYTAGAAVWLRMRVVGHQILGRLWPATQSEPGFWQISTTV CCCCCCHHCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEE TTDPIDTGRAGLVGSYFSGNTNVNPTLSFDDFRTITVQRLTVTRAINTVSRSWPAGTDVR EECCCCCCCCCEEEEECCCCCCCCCEECCCCCEEEEEEEHHHHHHHHHHHHCCCCCCCEE LEADMAAHLRTHGGSSS EECHHHHHHHCCCCCCC >Mature Secondary Structure MLTRSVTRAGTQLATADPGISYTAGAAVWLRMRVVGHQILGRLWPATQSEPGFWQISTTV CCCCCCHHCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEE TTDPIDTGRAGLVGSYFSGNTNVNPTLSFDDFRTITVQRLTVTRAINTVSRSWPAGTDVR EECCCCCCCCCEEEEECCCCCCCCCEECCCCCEEEEEEEHHHHHHHHHHHHCCCCCCCEE LEADMAAHLRTHGGSSS EECHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA