| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is insN1 [C]
Identifier: 158314898
GI number: 158314898
Start: 3646895
End: 3647185
Strand: Direct
Name: insN1 [C]
Synonym: Franean1_3088
Alternate gene names: 158314898
Gene position: 3646895-3647185 (Clockwise)
Preceding gene: 158314897
Following gene: 158314899
Centisome position: 40.6
GC content: 61.86
Gene sequence:
>291_bases ATGAGTCAGTCACGCAGGCGATACACACCCGAGTACAAAGACGAGGCGGTGAAGCTCGTCATCGATTCGGGCCGCCCCAC ATCGGCGGTCGCGAAAGATCTCGGTATCAACGAGGGAACGTTGGGGAGCTGGGTCGCGACCTGGCGGCGGGCACACCAAA ACGAAGAAGAACCGCTGTCGATGTCCGAACGGGCCCGGCTCCGCGAGCTGGAGAAGGAGAACCGGGAACTCCGGATGGAG CGCGAGTTCCTCTCAAAAGCGACCGCCTTCTTCGCGCAACGCCATCAGTGA
Upstream 100 bases:
>100_bases GTCTGGCCGGGCTAGCGGTATCTCGATCTCGTGAGGTGGGCCCCGTTCTTCGGACAGTGATCCCTACGAGGGATAATTGA TCCGTGAACGGAGGAGATCA
Downstream 100 bases:
>100_bases CCGACAAGTACGAACTGATCGCCGCGGAGAAGGACAACTACCCGGTCACCAAGATGTGCCAGTGGCTCGTCGTGTCGACA TCCGGTTTCTACGACTGGCA
Product: transposase IS3/IS911 family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 96; Mature: 95
Protein sequence:
>96_residues MSQSRRRYTPEYKDEAVKLVIDSGRPTSAVAKDLGINEGTLGSWVATWRRAHQNEEEPLSMSERARLRELEKENRELRME REFLSKATAFFAQRHQ
Sequences:
>Translated_96_residues MSQSRRRYTPEYKDEAVKLVIDSGRPTSAVAKDLGINEGTLGSWVATWRRAHQNEEEPLSMSERARLRELEKENRELRME REFLSKATAFFAQRHQ >Mature_95_residues SQSRRRYTPEYKDEAVKLVIDSGRPTSAVAKDLGINEGTLGSWVATWRRAHQNEEEPLSMSERARLRELEKENRELRMER EFLSKATAFFAQRHQ
Specific function: Involved in the transposition of the insertion sequence is911 [C]
COG id: COG2963
COG function: function code L; Transposase and inactivated derivatives
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11266; Mature: 11135
Theoretical pI: Translated: 9.76; Mature: 9.76
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSQSRRRYTPEYKDEAVKLVIDSGRPTSAVAKDLGINEGTLGSWVATWRRAHQNEEEPLS CCCCCCCCCCCCHHHHHEEEECCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCC MSERARLRELEKENRELRMEREFLSKATAFFAQRHQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure SQSRRRYTPEYKDEAVKLVIDSGRPTSAVAKDLGINEGTLGSWVATWRRAHQNEEEPLS CCCCCCCCCCCHHHHHEEEECCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCC MSERARLRELEKENRELRMEREFLSKATAFFAQRHQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA