| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158314877
Identifier: 158314877
GI number: 158314877
Start: 3622760
End: 3623425
Strand: Direct
Name: 158314877
Synonym: Franean1_3067
Alternate gene names: NA
Gene position: 3622760-3623425 (Clockwise)
Preceding gene: 158314875
Following gene: 158314880
Centisome position: 40.33
GC content: 67.42
Gene sequence:
>666_bases ATGAACTGGCGAGGCAGGCCACTGACCAGCCACGAAGTCGTCGTGAACACCATCGCGGCGACCCGAACCCGCAGCGGACT ACGTGTCGAAGCGCACCTGGACACCAGGGACTATCCGATCGGCGTCGCCGTCAGCAAAGCCCGCATCGATGCCCTACCGA TCGAACACCACACGATGCACAGAACATGGAACTACACAATCCACCCCACACACACCGACGGCACGGCCCCACCCGCCGTT AACGCCGCGACCGGTTCAGACCGGGCAGCGACCCTGACGCTGCTGGCCCACCCGCGCCTGACCGGCATGAGCATCACCGA GTTGGACGCACTCGCAGAACAGCTGGCGCCGGAACAGGCGGCCCGCCGGGAGCAGCGCCGCTACCAGGGACGCGGCGGAC CACGTCGCCACGCCCCCGGCGCCCACGGCAGAACCCTGCTCTCGCCCCGCGACCGGGTCCTGATCACCGTCGTTCACCTG CGCCAGGTCTGCTCTCAACGGCTCCTGGCGGACATGCTGGAAGTCGCAGCGCGGACGATCGGTCAGGCGGTCACCGACGT CCGGCATCTCCTGCACGAGCAGAACATCACGATCACGCCGACAACCCTGCGGTTCACCTGCGCCGAGCAGGTCACTGCCT ACGCGCGCACCGGACAGTACGACTGA
Upstream 100 bases:
>100_bases TCGCTAGCCCTTCGACGCAGAGCTCTTCCATCTCCTCCTCCATGCCGGTTTATCCCGGCGCTTTCACAAAATCGAACATC GATTGTTCTCCCAGATCACC
Downstream 100 bases:
>100_bases TGTGCCCCGTTAATTCCGGACAGTCGTTATAGGTCTGGGCTATGCGGCGGTCTGCCTTTTCAGGTACTCGTCGTGGACCT GCTGCGGGGTTCGGTAGTCG
Product: hypothetical protein
Products: NA
Alternate protein names: Rhodopirellula Transposase; IS3 Family ISVisp1-Like Transposase; Transposase Family Protein; Rhodopirellula Transposase Family Protein
Number of amino acids: Translated: 221; Mature: 221
Protein sequence:
>221_residues MNWRGRPLTSHEVVVNTIAATRTRSGLRVEAHLDTRDYPIGVAVSKARIDALPIEHHTMHRTWNYTIHPTHTDGTAPPAV NAATGSDRAATLTLLAHPRLTGMSITELDALAEQLAPEQAARREQRRYQGRGGPRRHAPGAHGRTLLSPRDRVLITVVHL RQVCSQRLLADMLEVAARTIGQAVTDVRHLLHEQNITITPTTLRFTCAEQVTAYARTGQYD
Sequences:
>Translated_221_residues MNWRGRPLTSHEVVVNTIAATRTRSGLRVEAHLDTRDYPIGVAVSKARIDALPIEHHTMHRTWNYTIHPTHTDGTAPPAV NAATGSDRAATLTLLAHPRLTGMSITELDALAEQLAPEQAARREQRRYQGRGGPRRHAPGAHGRTLLSPRDRVLITVVHL RQVCSQRLLADMLEVAARTIGQAVTDVRHLLHEQNITITPTTLRFTCAEQVTAYARTGQYD >Mature_221_residues MNWRGRPLTSHEVVVNTIAATRTRSGLRVEAHLDTRDYPIGVAVSKARIDALPIEHHTMHRTWNYTIHPTHTDGTAPPAV NAATGSDRAATLTLLAHPRLTGMSITELDALAEQLAPEQAARREQRRYQGRGGPRRHAPGAHGRTLLSPRDRVLITVVHL RQVCSQRLLADMLEVAARTIGQAVTDVRHLLHEQNITITPTTLRFTCAEQVTAYARTGQYD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24511; Mature: 24511
Theoretical pI: Translated: 10.46; Mature: 10.46
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNWRGRPLTSHEVVVNTIAATRTRSGLRVEAHLDTRDYPIGVAVSKARIDALPIEHHTMH CCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEEECCCCCCEEEEEECHHHEECCCCCHHEE RTWNYTIHPTHTDGTAPPAVNAATGSDRAATLTLLAHPRLTGMSITELDALAEQLAPEQA EEEEEEEEECCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHCHHHH ARREQRRYQGRGGPRRHAPGAHGRTLLSPRDRVLITVVHLRQVCSQRLLADMLEVAARTI HHHHHHHHCCCCCCCCCCCCCCCCEECCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHH GQAVTDVRHLLHEQNITITPTTLRFTCAEQVTAYARTGQYD HHHHHHHHHHHHHCCCEECCCEEEEHHHHHHHHHHHCCCCC >Mature Secondary Structure MNWRGRPLTSHEVVVNTIAATRTRSGLRVEAHLDTRDYPIGVAVSKARIDALPIEHHTMH CCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEEECCCCCCEEEEEECHHHEECCCCCHHEE RTWNYTIHPTHTDGTAPPAVNAATGSDRAATLTLLAHPRLTGMSITELDALAEQLAPEQA EEEEEEEEECCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHCHHHH ARREQRRYQGRGGPRRHAPGAHGRTLLSPRDRVLITVVHLRQVCSQRLLADMLEVAARTI HHHHHHHHCCCCCCCCCCCCCCCCEECCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHH GQAVTDVRHLLHEQNITITPTTLRFTCAEQVTAYARTGQYD HHHHHHHHHHHHHCCCEECCCEEEEHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA