Definition Frankia sp. EAN1pec chromosome, complete genome.
Accession NC_009921
Length 8,982,042

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The map label for this gene is 158314855

Identifier: 158314855

GI number: 158314855

Start: 3578882

End: 3579868

Strand: Direct

Name: 158314855

Synonym: Franean1_3045

Alternate gene names: NA

Gene position: 3578882-3579868 (Clockwise)

Preceding gene: 158314854

Following gene: 158314856

Centisome position: 39.84

GC content: 63.83

Gene sequence:

>987_bases
ATGACATTTACCAGACCACGGCGCCGCAGTGCGGCCCTGGTCGCCGCGTTGCTGGGCACCGTGATCCTCCTTGCGGGGTG
CGGCAGCGACGACAGCGACGATCAAGGTGGCGCGGTCGGAGCGACCCGCACTGTGGAGGCCGACAACGGCGCGGTCGAGA
TTCCGGCGCACCCGCAGCGGATTGCAACGCTCGGGAGACTAACCGTGTCGTTCCTCGACCTCGGCGGCGAGCCAGTGGGC
GTCACGGAGGTGGACGCTTCCGTGCTCGACGTACTGCCCGAGGAGCAGCAGGCCGCGTACAAGGCGGCCAAGCTCCTCGG
CTCCGGCGCCAGCGAAGCCGACCTCGAGCTGCTGGCCACCCTCAAGCCCGACCTCATCTTGTTCTCCGCACCTGACTCCG
ACTTCGAGCAGATGAAGTCGCAACTGGAATCGATCGCACCGACGATCTTCTTCGGATTCAGCTCGGACTGGAAGACCCGC
CTGTCCGTGACCGCGGATGCCACTGAGTTGACAGATGCTCTCAACGAGCAGAAGACCGAGTATGAGGAGAAGCTCGCCGA
GTTCCAGAACAAGTACCCGGAGATCATAAAGACCACCAAGTTCGGCGAAGTCAACAGAGGTTCTTGGCAGGACGCAGGAA
TGTTCACCCTCAACGGCTCGCAGTGCTCGGAGATAGCGCGAGCGGACATTCCCCTCGACATACCCGATCTGGGCGAAGGG
GGCGAGGAGCGATCGTTCGAGCAGATCGGCGGCCTGTCCGAGTACGACGTGCTCCTGTACCCCGTGGACGCTGAGGGTAA
GGTCACGGAAGGCTTCGCCCCCGTGGCGGAATCGGGCGCATGGAAGGCCCTTCCCGCCGTGACCTCGGGCAAGGCCCTGG
GTGTCTACTGCTTCGGCGATGTCAGCTTCACCAGATCCTATCGGACCTACTCTCAATACCTGGATTCGCTCGGCCAGGCG
CTGGCGAAGCTCGCGACGGCGGGATGA

Upstream 100 bases:

>100_bases
GGTCCACGCCGACGATGGAAAAGGGATCAATAGTAGCTGTCCGGATCTAACGGGGAACATCACCCCCACTCGAACGAAGA
ACAGAAGGAAAAACGCATCC

Downstream 100 bases:

>100_bases
CGGCACAGACCCGTGACGTCGAGGTCCGGGTGCCCGCGGCGGCATCCGGACCTCGACTGCGCGCCGTCGGTCTGCTCACA
GCACTGGTGACACTGCTCGT

Product: periplasmic binding protein

Products: NA

Alternate protein names: Fe3+-Hydroxamate ABC Transporter Periplasmic Protein

Number of amino acids: Translated: 328; Mature: 327

Protein sequence:

>328_residues
MTFTRPRRRSAALVAALLGTVILLAGCGSDDSDDQGGAVGATRTVEADNGAVEIPAHPQRIATLGRLTVSFLDLGGEPVG
VTEVDASVLDVLPEEQQAAYKAAKLLGSGASEADLELLATLKPDLILFSAPDSDFEQMKSQLESIAPTIFFGFSSDWKTR
LSVTADATELTDALNEQKTEYEEKLAEFQNKYPEIIKTTKFGEVNRGSWQDAGMFTLNGSQCSEIARADIPLDIPDLGEG
GEERSFEQIGGLSEYDVLLYPVDAEGKVTEGFAPVAESGAWKALPAVTSGKALGVYCFGDVSFTRSYRTYSQYLDSLGQA
LAKLATAG

Sequences:

>Translated_328_residues
MTFTRPRRRSAALVAALLGTVILLAGCGSDDSDDQGGAVGATRTVEADNGAVEIPAHPQRIATLGRLTVSFLDLGGEPVG
VTEVDASVLDVLPEEQQAAYKAAKLLGSGASEADLELLATLKPDLILFSAPDSDFEQMKSQLESIAPTIFFGFSSDWKTR
LSVTADATELTDALNEQKTEYEEKLAEFQNKYPEIIKTTKFGEVNRGSWQDAGMFTLNGSQCSEIARADIPLDIPDLGEG
GEERSFEQIGGLSEYDVLLYPVDAEGKVTEGFAPVAESGAWKALPAVTSGKALGVYCFGDVSFTRSYRTYSQYLDSLGQA
LAKLATAG
>Mature_327_residues
TFTRPRRRSAALVAALLGTVILLAGCGSDDSDDQGGAVGATRTVEADNGAVEIPAHPQRIATLGRLTVSFLDLGGEPVGV
TEVDASVLDVLPEEQQAAYKAAKLLGSGASEADLELLATLKPDLILFSAPDSDFEQMKSQLESIAPTIFFGFSSDWKTRL
SVTADATELTDALNEQKTEYEEKLAEFQNKYPEIIKTTKFGEVNRGSWQDAGMFTLNGSQCSEIARADIPLDIPDLGEGG
EERSFEQIGGLSEYDVLLYPVDAEGKVTEGFAPVAESGAWKALPAVTSGKALGVYCFGDVSFTRSYRTYSQYLDSLGQAL
AKLATAG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 34957; Mature: 34826

Theoretical pI: Translated: 4.12; Mature: 4.12

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS50983 FE_B12_PBP

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTFTRPRRRSAALVAALLGTVILLAGCGSDDSDDQGGAVGATRTVEADNGAVEIPAHPQR
CCCCCCCHHHHHHHHHHHHHHHHEECCCCCCCCCCCCCCCCEEEEECCCCEEECCCCHHH
IATLGRLTVSFLDLGGEPVGVTEVDASVLDVLPEEQQAAYKAAKLLGSGASEADLELLAT
HHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCHHHHHHHHH
LKPDLILFSAPDSDFEQMKSQLESIAPTIFFGFSSDWKTRLSVTADATELTDALNEQKTE
CCCCEEEEECCCHHHHHHHHHHHHHCCEEEEECCCCCCEEEEEEECHHHHHHHHHHHHHH
YEEKLAEFQNKYPEIIKTTKFGEVNRGSWQDAGMFTLNGSQCSEIARADIPLDIPDLGEG
HHHHHHHHHHHCHHHHHHCCCCCCCCCCCCCCCEEEECCHHHHHHHHCCCCCCCCCCCCC
GEERSFEQIGGLSEYDVLLYPVDAEGKVTEGFAPVAESGAWKALPAVTSGKALGVYCFGD
CCCCCHHHHCCCCCCCEEEEEECCCCCCCCCCCCHHCCCCCEECCCCCCCCEEEEEEECC
VSFTRSYRTYSQYLDSLGQALAKLATAG
CHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
TFTRPRRRSAALVAALLGTVILLAGCGSDDSDDQGGAVGATRTVEADNGAVEIPAHPQR
CCCCCCHHHHHHHHHHHHHHHHEECCCCCCCCCCCCCCCCEEEEECCCCEEECCCCHHH
IATLGRLTVSFLDLGGEPVGVTEVDASVLDVLPEEQQAAYKAAKLLGSGASEADLELLAT
HHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCHHHHHHHHH
LKPDLILFSAPDSDFEQMKSQLESIAPTIFFGFSSDWKTRLSVTADATELTDALNEQKTE
CCCCEEEEECCCHHHHHHHHHHHHHCCEEEEECCCCCCEEEEEEECHHHHHHHHHHHHHH
YEEKLAEFQNKYPEIIKTTKFGEVNRGSWQDAGMFTLNGSQCSEIARADIPLDIPDLGEG
HHHHHHHHHHHCHHHHHHCCCCCCCCCCCCCCCEEEECCHHHHHHHHCCCCCCCCCCCCC
GEERSFEQIGGLSEYDVLLYPVDAEGKVTEGFAPVAESGAWKALPAVTSGKALGVYCFGD
CCCCCHHHHCCCCCCCEEEEEECCCCCCCCCCCCHHCCCCCEECCCCCCCCEEEEEEECC
VSFTRSYRTYSQYLDSLGQALAKLATAG
CHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA