Click here to switch to the map view.

The map label for this gene is 158314849

Identifier: 158314849

GI number: 158314849

Start: 3572412

End: 3573518

Strand: Direct

Name: 158314849

Synonym: Franean1_3039

Alternate gene names: NA

Gene position: 3572412-3573518 (Clockwise)

Preceding gene: 158314843

Following gene: 158314850

Centisome position: 39.77

GC content: 68.65

Gene sequence:

>1107_bases
TTGCCTGCCGGACAGGGCCCGCGTCGGGCAGGCTGGATGGTCATGGTGTGGTCCCTGTTCTACGCCCTGACACGCAACGC
TCTCGGAGTGATGCTGCTCCGAGTCCGCGGGGACACCGCGAAGGACGTGGAGCTCCTCGTCCTGCGACATCAGGTGGCGG
TGTTACGACGGCAGGTGAACCGCCCGGCGCTGGAACCGGCGGATCGGGTGATCCTCGCAGCCCTGTCCCGGCTGTTGCCC
CGGGCCCGCTGGGGTTCGTTCGTCGTCACCCCGGCCACCGTATTGCGCTGGCACCGTGACCTCCTCGCACGACAATGGAC
CTACCCTCGGACGTCGCCCGGACGGCCATCGGTCCGCCGGGAGATCCGCGAGCTGGTCCTGCGCCTCGCACGGGAGAACC
CGACCTGGGGCCACCGCCGGATCCAAGGAGAACTCGTCGGGTTGGGCTACCCGGTCGGGGTCGCCACCGTCTGGCGGATC
CTGCACCGCGCCGGTGTCGATCCAGCGCCCCGTCGGGCCGACGCCTCCTGGCGCACGTTCCTGCGCGCCCAGGCCTCCGG
CATCCTCGCCTGCGATTTCTTCACCGTGGACACCGTATTCCTACAACGGATCTACGTGTTCTTCGTCGTCGAGCACGCCA
CCCGCCGTGTCCACGTCCTCGGGGTCACGAAGCATCCAACCGCGGCCTGGGTCACCCAGCAGGCACGGAACCTGCTGATG
GACCTCGAGGAACGTGGCCACCGGTTCCGGTTCCTCCTCCGTGACCGCGACACGAAATTTACGGTTTCCTTCGACGCTGT
CTTTGCCGGAGCCGGTATCGACGTGGTGCGCACACCGCCACAGTCGCCGCAGGCGAACGCGACCGCGGAACGCTGGGTCG
GCACCGCCCGCCGGGAATGCACCGACAGGCTGTTGATCGTCTCCGAACGGCACCTGACCACCGCCCTCACCACATACGCC
GAGCATTTCAACACCCACCGGCCTCACCGCTCCCTCGGCCAGCACCCGCCCGACCCGCCACCCGTGGTCACCCCGACCCC
GGGTTCCACCGTCCGTCGCACACGCATCCTCGGCGGGCTGATCAACGAGTACCGCAACGCCGCCTGA

Upstream 100 bases:

>100_bases
TGCCTGTATTCCCTGGACGCCGTTGTCTGAGCGGTGTCCGATCGGACCTGGCAGCGGGCTGTGGGGCTCCAGAACCCCGA
TTTGGGGATGACCTGCGCGT

Downstream 100 bases:

>100_bases
CGACCTCCGCAGGCGATCACCCGGGCTGTAAAAGAGCAGCTCACAGGCCGCACCCGGATTTTGGAGCCCAACAGGCTCAA
CCTCGCCCTGAACACCGTCA

Product: integrase catalytic subunit

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 368; Mature: 367

Protein sequence:

>368_residues
MPAGQGPRRAGWMVMVWSLFYALTRNALGVMLLRVRGDTAKDVELLVLRHQVAVLRRQVNRPALEPADRVILAALSRLLP
RARWGSFVVTPATVLRWHRDLLARQWTYPRTSPGRPSVRREIRELVLRLARENPTWGHRRIQGELVGLGYPVGVATVWRI
LHRAGVDPAPRRADASWRTFLRAQASGILACDFFTVDTVFLQRIYVFFVVEHATRRVHVLGVTKHPTAAWVTQQARNLLM
DLEERGHRFRFLLRDRDTKFTVSFDAVFAGAGIDVVRTPPQSPQANATAERWVGTARRECTDRLLIVSERHLTTALTTYA
EHFNTHRPHRSLGQHPPDPPPVVTPTPGSTVRRTRILGGLINEYRNAA

Sequences:

>Translated_368_residues
MPAGQGPRRAGWMVMVWSLFYALTRNALGVMLLRVRGDTAKDVELLVLRHQVAVLRRQVNRPALEPADRVILAALSRLLP
RARWGSFVVTPATVLRWHRDLLARQWTYPRTSPGRPSVRREIRELVLRLARENPTWGHRRIQGELVGLGYPVGVATVWRI
LHRAGVDPAPRRADASWRTFLRAQASGILACDFFTVDTVFLQRIYVFFVVEHATRRVHVLGVTKHPTAAWVTQQARNLLM
DLEERGHRFRFLLRDRDTKFTVSFDAVFAGAGIDVVRTPPQSPQANATAERWVGTARRECTDRLLIVSERHLTTALTTYA
EHFNTHRPHRSLGQHPPDPPPVVTPTPGSTVRRTRILGGLINEYRNAA
>Mature_367_residues
PAGQGPRRAGWMVMVWSLFYALTRNALGVMLLRVRGDTAKDVELLVLRHQVAVLRRQVNRPALEPADRVILAALSRLLPR
ARWGSFVVTPATVLRWHRDLLARQWTYPRTSPGRPSVRREIRELVLRLARENPTWGHRRIQGELVGLGYPVGVATVWRIL
HRAGVDPAPRRADASWRTFLRAQASGILACDFFTVDTVFLQRIYVFFVVEHATRRVHVLGVTKHPTAAWVTQQARNLLMD
LEERGHRFRFLLRDRDTKFTVSFDAVFAGAGIDVVRTPPQSPQANATAERWVGTARRECTDRLLIVSERHLTTALTTYAE
HFNTHRPHRSLGQHPPDPPPVVTPTPGSTVRRTRILGGLINEYRNAA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 41816; Mature: 41685

Theoretical pI: Translated: 12.08; Mature: 12.08

Prosite motif: PS50994 INTEGRASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPAGQGPRRAGWMVMVWSLFYALTRNALGVMLLRVRGDTAKDVELLVLRHQVAVLRRQVN
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCCHHHHHHHHHHHHHHHHHC
RPALEPADRVILAALSRLLPRARWGSFVVTPATVLRWHRDLLARQWTYPRTSPGRPSVRR
CCCCCHHHHHHHHHHHHHHCHHHCCCEEECHHHHHHHHHHHHHHHCCCCCCCCCCHHHHH
EIRELVLRLARENPTWGHRRIQGELVGLGYPVGVATVWRILHRAGVDPAPRRADASWRTF
HHHHHHHHHHHCCCCCCCCEECEEEEECCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHH
LRAQASGILACDFFTVDTVFLQRIYVFFVVEHATRRVHVLGVTKHPTAAWVTQQARNLLM
HHHHCCCEEEEHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCHHHHHHHHHHHHHH
DLEERGHRFRFLLRDRDTKFTVSFDAVFAGAGIDVVRTPPQSPQANATAERWVGTARREC
HHHHCCCEEEEEEECCCCEEEEEEHHEEECCCCCEEECCCCCCCCCCHHHHHHHHHHHHH
TDRLLIVSERHLTTALTTYAEHFNTHRPHRSLGQHPPDPPPVVTPTPGSTVRRTRILGGL
HHHEEEEECHHHHHHHHHHHHHHCCCCCHHHHCCCCCCCCCEECCCCCCHHHHHHHHHHH
INEYRNAA
HHHHCCCC
>Mature Secondary Structure 
PAGQGPRRAGWMVMVWSLFYALTRNALGVMLLRVRGDTAKDVELLVLRHQVAVLRRQVN
CCCCCCCCCHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCCHHHHHHHHHHHHHHHHHC
RPALEPADRVILAALSRLLPRARWGSFVVTPATVLRWHRDLLARQWTYPRTSPGRPSVRR
CCCCCHHHHHHHHHHHHHHCHHHCCCEEECHHHHHHHHHHHHHHHCCCCCCCCCCHHHHH
EIRELVLRLARENPTWGHRRIQGELVGLGYPVGVATVWRILHRAGVDPAPRRADASWRTF
HHHHHHHHHHHCCCCCCCCEECEEEEECCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHH
LRAQASGILACDFFTVDTVFLQRIYVFFVVEHATRRVHVLGVTKHPTAAWVTQQARNLLM
HHHHCCCEEEEHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCHHHHHHHHHHHHHH
DLEERGHRFRFLLRDRDTKFTVSFDAVFAGAGIDVVRTPPQSPQANATAERWVGTARREC
HHHHCCCEEEEEEECCCCEEEEEEHHEEECCCCCEEECCCCCCCCCCHHHHHHHHHHHHH
TDRLLIVSERHLTTALTTYAEHFNTHRPHRSLGQHPPDPPPVVTPTPGSTVRRTRILGGL
HHHEEEEECHHHHHHHHHHHHHHCCCCCHHHHCCCCCCCCCEECCCCCCHHHHHHHHHHH
INEYRNAA
HHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA