| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158314841
Identifier: 158314841
GI number: 158314841
Start: 3563155
End: 3564657
Strand: Direct
Name: 158314841
Synonym: Franean1_3030
Alternate gene names: NA
Gene position: 3563155-3564657 (Clockwise)
Preceding gene: 158314840
Following gene: 158314843
Centisome position: 39.67
GC content: 72.79
Gene sequence:
>1503_bases GTGCCGCCGCCGGCGGGCCCGTTCGCCGAGGCCAGGGCGCGGTACCTCGCGCTGGAGGCGCTGCTCGCCGGGGCGGACGC CCGCGCTGGCCGGCACGACGAGGTCGAGGACCTGATCGAGCGGGATGGCCGTGAGGTGCTGCGGGCGCTGCTGCAGGGCC ATCTTGACCTGCGTGCCCGTGAGGAGACGCGGGCCGACCCGCCACCGGTCGGTGCTGACGGGGTGGCCCGTACCCGGCTG GAACGCGGCCATGGCCGGCGGCTGGTGTCCCAGTTCGGGCAGGTCGTGGTCAGCCGGCACGCCTACCGGGCGGCGGGGGC GGGCAACCTGCATCCCGCGGACGCGGTGCTGAACCTTCCGGCGGGGCTGTACTCGCACACGCTCGCGCGCAGGCTCGCCC TGGAGGTGACCCGGGGCTCGTTCGACGACGCGGTCGACGCGGTCGCCCGCGCGACCGGCCAGGTGATGGGCAAACGGCTC GCCGTCGAGCTCGTCCGGAGCCTGGCCGCCGACATCACCGCCTTCTACGCCCAGCCACGGCCCGAGATCACCCCCGCCGG CCGGCTGCTGGTCCTCCAGTTCGACGGCAAGGGCATCGTCATGCGCCCCGAGGCGCTGCGCCCGGCGACCGCGAAGGCCG CCGAGGCGAGGAAGAACCGGCTGGCCACCCGGCTGTCACCCGGCGAGAAAGCCAACCGCAAACGGATGGCCGAGATCGCC ATCGTGCACGACACCACCCCCGCGCCGCGCACCGTCGACGACGTCATCCCCCGCCGCGGCAACGCCCAGGCCAGCGGCCA GCCCCGGGCGGACGGGCCGACGGCCACCGGGACCTGGCTGGCCGCCTCCGTCGTCGACGACATCGCCACCGTCATCGCCG CCGGCTTCGACGAGGCCGAACGCCGCGACCCCCACCAGCAGCGGACCTGGGTCGTGCTCGTCGACGGCAACAACACCCAG CTCGACGCGATCCACGCCGAGGCCACCCGCCGCGACGTCACCATCACCGTCATCGTCGACTTCATCCACGTCCTCGAGTA CCTCTGGACCGCCGCCTGGTCGTTCTTCGACAAGGGCGACCCCGACGCCGAGGACTGGGTCCACGCACAGGCCCGCGGCG TGCTCGCCGGCAAGGCCCACGCGATCGCCTCCGGGTTCCGCCGCCGCGCGACCCGCAACCACTACAACGCCACCGAACGC AAGGGCGCCGACACCGCCGCCGACTACCTCGACGCCAAGGCCCCCTACCTGGGCTACGACCTCGCGCTCGCCAACGGCTG GCCGATCGCGACCGGCGTCGTCGAGGGCTCCTGCCGCCACCTCATCAAGGACCGATTCGACATCACCGGAGCCAGATGGG GCCTCGACGGCGCCGAAGCAGTCCTCCTCCTCCGCGCAGTCGTCACCAACGGCGACTTCGACGCCTACTGGGCTTACCAC CTCGACCAGGAACAGCACCGCAACCACCACACCAAGTTCGCCGAACACTACACACCGACTTGA
Upstream 100 bases:
>100_bases ATCAAGAAGGTGGCTCCTTCTCGCTACGTTCCGTGGTGACGAAACCATTGGGACGTGACTGCGAAAAGGAGCCTGCGTGT CAGGGTACGAGGAGCCGGCC
Downstream 100 bases:
>100_bases TCACGTCACTTGGCGGGAACTACGCCCATTTTAGTTAGCCAGCCGCGCACGAGAGAAGTAAAGCGGCGACGATGCAAAAC CTTATAAGGCCACCGCGATC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 500; Mature: 499
Protein sequence:
>500_residues MPPPAGPFAEARARYLALEALLAGADARAGRHDEVEDLIERDGREVLRALLQGHLDLRAREETRADPPPVGADGVARTRL ERGHGRRLVSQFGQVVVSRHAYRAAGAGNLHPADAVLNLPAGLYSHTLARRLALEVTRGSFDDAVDAVARATGQVMGKRL AVELVRSLAADITAFYAQPRPEITPAGRLLVLQFDGKGIVMRPEALRPATAKAAEARKNRLATRLSPGEKANRKRMAEIA IVHDTTPAPRTVDDVIPRRGNAQASGQPRADGPTATGTWLAASVVDDIATVIAAGFDEAERRDPHQQRTWVVLVDGNNTQ LDAIHAEATRRDVTITVIVDFIHVLEYLWTAAWSFFDKGDPDAEDWVHAQARGVLAGKAHAIASGFRRRATRNHYNATER KGADTAADYLDAKAPYLGYDLALANGWPIATGVVEGSCRHLIKDRFDITGARWGLDGAEAVLLLRAVVTNGDFDAYWAYH LDQEQHRNHHTKFAEHYTPT
Sequences:
>Translated_500_residues MPPPAGPFAEARARYLALEALLAGADARAGRHDEVEDLIERDGREVLRALLQGHLDLRAREETRADPPPVGADGVARTRL ERGHGRRLVSQFGQVVVSRHAYRAAGAGNLHPADAVLNLPAGLYSHTLARRLALEVTRGSFDDAVDAVARATGQVMGKRL AVELVRSLAADITAFYAQPRPEITPAGRLLVLQFDGKGIVMRPEALRPATAKAAEARKNRLATRLSPGEKANRKRMAEIA IVHDTTPAPRTVDDVIPRRGNAQASGQPRADGPTATGTWLAASVVDDIATVIAAGFDEAERRDPHQQRTWVVLVDGNNTQ LDAIHAEATRRDVTITVIVDFIHVLEYLWTAAWSFFDKGDPDAEDWVHAQARGVLAGKAHAIASGFRRRATRNHYNATER KGADTAADYLDAKAPYLGYDLALANGWPIATGVVEGSCRHLIKDRFDITGARWGLDGAEAVLLLRAVVTNGDFDAYWAYH LDQEQHRNHHTKFAEHYTPT >Mature_499_residues PPPAGPFAEARARYLALEALLAGADARAGRHDEVEDLIERDGREVLRALLQGHLDLRAREETRADPPPVGADGVARTRLE RGHGRRLVSQFGQVVVSRHAYRAAGAGNLHPADAVLNLPAGLYSHTLARRLALEVTRGSFDDAVDAVARATGQVMGKRLA VELVRSLAADITAFYAQPRPEITPAGRLLVLQFDGKGIVMRPEALRPATAKAAEARKNRLATRLSPGEKANRKRMAEIAI VHDTTPAPRTVDDVIPRRGNAQASGQPRADGPTATGTWLAASVVDDIATVIAAGFDEAERRDPHQQRTWVVLVDGNNTQL DAIHAEATRRDVTITVIVDFIHVLEYLWTAAWSFFDKGDPDAEDWVHAQARGVLAGKAHAIASGFRRRATRNHYNATERK GADTAADYLDAKAPYLGYDLALANGWPIATGVVEGSCRHLIKDRFDITGARWGLDGAEAVLLLRAVVTNGDFDAYWAYHL DQEQHRNHHTKFAEHYTPT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 54568; Mature: 54437
Theoretical pI: Translated: 7.65; Mature: 7.65
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 1.0 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 0.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPPPAGPFAEARARYLALEALLAGADARAGRHDEVEDLIERDGREVLRALLQGHLDLRAR CCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCHHHHHHHHHHCCCCCEEC EETRADPPPVGADGVARTRLERGHGRRLVSQFGQVVVSRHAYRAAGAGNLHPADAVLNLP HHCCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHCC AGLYSHTLARRLALEVTRGSFDDAVDAVARATGQVMGKRLAVELVRSLAADITAFYAQPR CHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC PEITPAGRLLVLQFDGKGIVMRPEALRPATAKAAEARKNRLATRLSPGEKANRKRMAEIA CCCCCCCCEEEEEECCCEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHEEE IVHDTTPAPRTVDDVIPRRGNAQASGQPRADGPTATGTWLAASVVDDIATVIAAGFDEAE EEECCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHH RRDPHQQRTWVVLVDGNNTQLDAIHAEATRRDVTITVIVDFIHVLEYLWTAAWSFFDKGD HCCCCCCCEEEEEECCCCCEEEEEEHHHCCCCEEEHHHHHHHHHHHHHHHHHHHHHCCCC PDAEDWVHAQARGVLAGKAHAIASGFRRRATRNHYNATERKGADTAADYLDAKAPYLGYD CCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCHHHCCCHHHHHHHHCCCCCCEEE LALANGWPIATGVVEGSCRHLIKDRFDITGARWGLDGAEAVLLLRAVVTNGDFDAYWAYH EEECCCCCEEHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEEE LDQEQHRNHHTKFAEHYTPT CCHHHHHHHHHHHHHCCCCC >Mature Secondary Structure PPPAGPFAEARARYLALEALLAGADARAGRHDEVEDLIERDGREVLRALLQGHLDLRAR CCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCHHHHHHHHHHCCCCCEEC EETRADPPPVGADGVARTRLERGHGRRLVSQFGQVVVSRHAYRAAGAGNLHPADAVLNLP HHCCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHCC AGLYSHTLARRLALEVTRGSFDDAVDAVARATGQVMGKRLAVELVRSLAADITAFYAQPR CHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC PEITPAGRLLVLQFDGKGIVMRPEALRPATAKAAEARKNRLATRLSPGEKANRKRMAEIA CCCCCCCCEEEEEECCCEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHEEE IVHDTTPAPRTVDDVIPRRGNAQASGQPRADGPTATGTWLAASVVDDIATVIAAGFDEAE EEECCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHH RRDPHQQRTWVVLVDGNNTQLDAIHAEATRRDVTITVIVDFIHVLEYLWTAAWSFFDKGD HCCCCCCCEEEEEECCCCCEEEEEEHHHCCCCEEEHHHHHHHHHHHHHHHHHHHHHCCCC PDAEDWVHAQARGVLAGKAHAIASGFRRRATRNHYNATERKGADTAADYLDAKAPYLGYD CCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCHHHCCCHHHHHHHHCCCCCCEEE LALANGWPIATGVVEGSCRHLIKDRFDITGARWGLDGAEAVLLLRAVVTNGDFDAYWAYH EEECCCCCEEHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEEE LDQEQHRNHHTKFAEHYTPT CCHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA