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The map label for this gene is aidB [H]

Identifier: 158314832

GI number: 158314832

Start: 3552596

End: 3554455

Strand: Direct

Name: aidB [H]

Synonym: Franean1_3018

Alternate gene names: 158314832

Gene position: 3552596-3554455 (Clockwise)

Preceding gene: 158314827

Following gene: 158314835

Centisome position: 39.55

GC content: 69.62

Gene sequence:

>1860_bases
ATGCCAAGGCTGCCAGGGGAGGAGTCGTTCATGGGGCACTACCGGAGCAATCTCCGCGACATCGAGTTCAACCTGTTCGA
GGTGTTCGGCGTGGACCGGACGCTCGGGACCGGGCCCTTCGCGGAGATGGACCGCGACACAGCGCATGAGGTGCTCGCCG
AGCTGGAGCGGGTCGCCGTCGGGCCGATCGCCGAGTCCTTCGAGGACGCCGACCGGCACCCGCCGACACTCGACCCCGCC
ACCGGCACCGTCACACTGCCCGAGTCGTTCCGCAAGTCCTTCGCGGCGGCGCAGGAGGGCGAGTGGTGGCGGCTCTACCT
CCCGCCGCACCTGGGCGGCATGGGTGCCCCGCCGACCATCGCCTGGGCGGCGTCCGAGCTGCTCCTCGGGGCGAACCCGG
CGGTGTTCATGTACATGGCCGGGCCGACGTTCGCCGCGATCCTCGAGGGCATCGGCACGCCATGGCAGAAGAAGATCGCG
AACTGGGCCATCGAGCGGCACTGGGGCGCGACCATGGTGCTGACCGAGCCGGACGCCGGCTCCGACGTCGGCGCAGGCCG
GGCGCGGGCCGTCGAGCAGCCGGACGGCACCTGGCACATCGAAGGTGTGAAGCGCTTCATCACCAGCGGTGACTGGGACA
TCCCGGAGAACATCTTCCACCTGGTGCTCGCCCGCCCCGAGGGGCACGGCCCCGGCACCAAGGGCCTGTCGATGTTCGTC
GTGCCCAAGTACCTGCCCGACCCGGAGACCGGCGCCCCGGGCGCCCGCAACGGTGCCTACGTCACGAACCTTGAGAAGAA
AATGGGCCTGAAGGTCTCGACCACCTGCGAGCTGCGCTTCGGCGAGCGTGAGCCGGCCGTCGGATGGCTCGTCGGCGACG
TCCACGACGGCATCGCGCAGATGTTCCGGGTCATCGAGTACGCCCGGATGATGGTCGGCACGAAGGCGATCGCCACGTTG
TCCACCGGGTACCTCAACGCGCTGGCCTTCGCCCGCGAGCGGATCCAGGGCGCCGACCTGACCCGGGCGTCGGACAAGAC
CGCGCCGCGGGTGGCCATCATCAACCATCCCGACGTGCGCCGGATGCTCATGCAGCAGAAGGCCTACGCGGAGGGGATGC
GTGCCCTCGTGCTGTACACCGCTACCTTCCAGGACGCCGTCACGCTGGCGGCGGCCCGCGGCGAGGTGGACGACAACGCG
GTGCGGATGAACGACCTGCTGCTCCCGATCGTGAAGGGAGTCGGCTCGGAGCGCTCCTACGAACTGCTGGCGAGCTCGCT
GCAGGTCCTCGGCGGCTCCGGATACCTGCAGGACTACCCGATCGAGCAGTACATCCGCGACGCGAAGATCGACACCCTGT
ACGAGGGCACGACGTCCATCCAGGGCCAGGACCTCTTCTTCCGGAAGATCGTCCGGGACAAGGGTCGGGCGCTGACCACT
CTGTTCACGCAGGTCCAGGAGTTTGTGAAGGGCGAGGCGGGCAACGGCGCGCTCCGCGCGGAGCGGGAGTCGCTGGGCGC
GGCGCTCGACGAGTGCCAGGCCATGGTCGGTTCGATGGTCGGGTTCCTCACCGCCACCGCCCAGGACAAGTCCCAGGTCT
ACCGGGTCGGGCTGAACACCACGCGGCTGCTGATGAGCATCGGCGACCTCGTCGTCGGCTGGCTGCTGCTGCGCGGTGCC
GACGCGGCGCTACGCGGGCTGGACGGCTCCCCGTCCGAGCGCGACCGGGCGTTCTACGAGGGCAAGATCGCGGCCGCGCG
CTGGTTCGCGGCCAACATCCTGCCGGAGCTGCGCACACGCCGGACGGTGCTGGAGGGCACCGGTCTCGGGCTGATGGAGA
TGTCCGAAGCGGCGTTCTGA

Upstream 100 bases:

>100_bases
AAACCATGTTACTTGTGGGTAGTATACGCATAACCTACCAGCGAGTAACTTAAGTCGGGGCCACCTGCGCCGCCGACCAC
TGTGCGGTGGGCCGTCAGGG

Downstream 100 bases:

>100_bases
CTCTCACGGATGCTCCAGACGCCCTCATATTCGTCAAACCGTCGGAGCTGGCAGCTCATAGCTGGGTGGCGTGGGAAAGC
GCAGTAGATCTCGCCTGCGA

Product: acyl-CoA dehydrogenase domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 619; Mature: 618

Protein sequence:

>619_residues
MPRLPGEESFMGHYRSNLRDIEFNLFEVFGVDRTLGTGPFAEMDRDTAHEVLAELERVAVGPIAESFEDADRHPPTLDPA
TGTVTLPESFRKSFAAAQEGEWWRLYLPPHLGGMGAPPTIAWAASELLLGANPAVFMYMAGPTFAAILEGIGTPWQKKIA
NWAIERHWGATMVLTEPDAGSDVGAGRARAVEQPDGTWHIEGVKRFITSGDWDIPENIFHLVLARPEGHGPGTKGLSMFV
VPKYLPDPETGAPGARNGAYVTNLEKKMGLKVSTTCELRFGEREPAVGWLVGDVHDGIAQMFRVIEYARMMVGTKAIATL
STGYLNALAFARERIQGADLTRASDKTAPRVAIINHPDVRRMLMQQKAYAEGMRALVLYTATFQDAVTLAAARGEVDDNA
VRMNDLLLPIVKGVGSERSYELLASSLQVLGGSGYLQDYPIEQYIRDAKIDTLYEGTTSIQGQDLFFRKIVRDKGRALTT
LFTQVQEFVKGEAGNGALRAERESLGAALDECQAMVGSMVGFLTATAQDKSQVYRVGLNTTRLLMSIGDLVVGWLLLRGA
DAALRGLDGSPSERDRAFYEGKIAAARWFAANILPELRTRRTVLEGTGLGLMEMSEAAF

Sequences:

>Translated_619_residues
MPRLPGEESFMGHYRSNLRDIEFNLFEVFGVDRTLGTGPFAEMDRDTAHEVLAELERVAVGPIAESFEDADRHPPTLDPA
TGTVTLPESFRKSFAAAQEGEWWRLYLPPHLGGMGAPPTIAWAASELLLGANPAVFMYMAGPTFAAILEGIGTPWQKKIA
NWAIERHWGATMVLTEPDAGSDVGAGRARAVEQPDGTWHIEGVKRFITSGDWDIPENIFHLVLARPEGHGPGTKGLSMFV
VPKYLPDPETGAPGARNGAYVTNLEKKMGLKVSTTCELRFGEREPAVGWLVGDVHDGIAQMFRVIEYARMMVGTKAIATL
STGYLNALAFARERIQGADLTRASDKTAPRVAIINHPDVRRMLMQQKAYAEGMRALVLYTATFQDAVTLAAARGEVDDNA
VRMNDLLLPIVKGVGSERSYELLASSLQVLGGSGYLQDYPIEQYIRDAKIDTLYEGTTSIQGQDLFFRKIVRDKGRALTT
LFTQVQEFVKGEAGNGALRAERESLGAALDECQAMVGSMVGFLTATAQDKSQVYRVGLNTTRLLMSIGDLVVGWLLLRGA
DAALRGLDGSPSERDRAFYEGKIAAARWFAANILPELRTRRTVLEGTGLGLMEMSEAAF
>Mature_618_residues
PRLPGEESFMGHYRSNLRDIEFNLFEVFGVDRTLGTGPFAEMDRDTAHEVLAELERVAVGPIAESFEDADRHPPTLDPAT
GTVTLPESFRKSFAAAQEGEWWRLYLPPHLGGMGAPPTIAWAASELLLGANPAVFMYMAGPTFAAILEGIGTPWQKKIAN
WAIERHWGATMVLTEPDAGSDVGAGRARAVEQPDGTWHIEGVKRFITSGDWDIPENIFHLVLARPEGHGPGTKGLSMFVV
PKYLPDPETGAPGARNGAYVTNLEKKMGLKVSTTCELRFGEREPAVGWLVGDVHDGIAQMFRVIEYARMMVGTKAIATLS
TGYLNALAFARERIQGADLTRASDKTAPRVAIINHPDVRRMLMQQKAYAEGMRALVLYTATFQDAVTLAAARGEVDDNAV
RMNDLLLPIVKGVGSERSYELLASSLQVLGGSGYLQDYPIEQYIRDAKIDTLYEGTTSIQGQDLFFRKIVRDKGRALTTL
FTQVQEFVKGEAGNGALRAERESLGAALDECQAMVGSMVGFLTATAQDKSQVYRVGLNTTRLLMSIGDLVVGWLLLRGAD
AALRGLDGSPSERDRAFYEGKIAAARWFAANILPELRTRRTVLEGTGLGLMEMSEAAF

Specific function: May help to prevent alkylation damage by protecting DNA and destroying alkylating agents [H]

COG id: COG1960

COG function: function code I; Acyl-CoA dehydrogenases

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the acyl-CoA dehydrogenase family [H]

Homologues:

Organism=Homo sapiens, GI21361497, Length=482, Percent_Identity=26.3485477178423, Blast_Score=100, Evalue=5e-21,
Organism=Homo sapiens, GI4501859, Length=361, Percent_Identity=25.4847645429363, Blast_Score=86, Evalue=1e-16,
Organism=Homo sapiens, GI187960098, Length=362, Percent_Identity=26.7955801104972, Blast_Score=84, Evalue=6e-16,
Organism=Homo sapiens, GI4557231, Length=362, Percent_Identity=26.7955801104972, Blast_Score=83, Evalue=6e-16,
Organism=Homo sapiens, GI4557233, Length=361, Percent_Identity=25.4847645429363, Blast_Score=75, Evalue=2e-13,
Organism=Escherichia coli, GI87082384, Length=380, Percent_Identity=26.3157894736842, Blast_Score=108, Evalue=1e-24,
Organism=Caenorhabditis elegans, GI17508101, Length=363, Percent_Identity=23.4159779614325, Blast_Score=81, Evalue=2e-15,
Organism=Caenorhabditis elegans, GI86563381, Length=379, Percent_Identity=23.7467018469657, Blast_Score=76, Evalue=6e-14,
Organism=Caenorhabditis elegans, GI86563383, Length=379, Percent_Identity=23.7467018469657, Blast_Score=76, Evalue=6e-14,
Organism=Caenorhabditis elegans, GI17569725, Length=297, Percent_Identity=29.2929292929293, Blast_Score=74, Evalue=3e-13,
Organism=Caenorhabditis elegans, GI17534899, Length=303, Percent_Identity=27.7227722772277, Blast_Score=72, Evalue=7e-13,
Organism=Caenorhabditis elegans, GI17570075, Length=310, Percent_Identity=26.7741935483871, Blast_Score=71, Evalue=2e-12,
Organism=Caenorhabditis elegans, GI17506239, Length=367, Percent_Identity=22.3433242506812, Blast_Score=70, Evalue=2e-12,
Organism=Drosophila melanogaster, GI281363737, Length=367, Percent_Identity=26.7029972752044, Blast_Score=89, Evalue=1e-17,
Organism=Drosophila melanogaster, GI24646207, Length=309, Percent_Identity=27.1844660194175, Blast_Score=82, Evalue=1e-15,
Organism=Drosophila melanogaster, GI24660351, Length=312, Percent_Identity=29.1666666666667, Blast_Score=80, Evalue=5e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006089
- InterPro:   IPR006090
- InterPro:   IPR006091
- InterPro:   IPR009075
- InterPro:   IPR009100 [H]

Pfam domain/function: PF00441 Acyl-CoA_dh_1; PF02770 Acyl-CoA_dh_M [H]

EC number: NA

Molecular weight: Translated: 67604; Mature: 67473

Theoretical pI: Translated: 5.24; Mature: 5.24

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPRLPGEESFMGHYRSNLRDIEFNLFEVFGVDRTLGTGPFAEMDRDTAHEVLAELERVAV
CCCCCCCHHHHHHHHCCCCCCCEEEEEEECCCCCCCCCCCHHCCHHHHHHHHHHHHHHHC
GPIAESFEDADRHPPTLDPATGTVTLPESFRKSFAAAQEGEWWRLYLPPHLGGMGAPPTI
CHHHHHHHHHCCCCCCCCCCCCEEECCHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCHH
AWAASELLLGANPAVFMYMAGPTFAAILEGIGTPWQKKIANWAIERHWGATMVLTEPDAG
HHHHHHHHCCCCCEEEEEECCCHHHHHHHHCCCCHHHHHHHHHHHHCCCEEEEEECCCCC
SDVGAGRARAVEQPDGTWHIEGVKRFITSGDWDIPENIFHLVLARPEGHGPGTKGLSMFV
CCCCCCCCCCCCCCCCCEEHHHHHHHHCCCCCCCHHHHHEEEEECCCCCCCCCCCCEEEE
VPKYLPDPETGAPGARNGAYVTNLEKKMGLKVSTTCELRFGEREPAVGWLVGDVHDGIAQ
EECCCCCCCCCCCCCCCCCEEEEHHHHHCCEEEEEEEEEECCCCCCCEEEEHHHHHHHHH
MFRVIEYARMMVGTKAIATLSTGYLNALAFARERIQGADLTRASDKTAPRVAIINHPDVR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCHHH
RMLMQQKAYAEGMRALVLYTATFQDAVTLAAARGEVDDNAVRMNDLLLPIVKGVGSERSY
HHHHHHHHHHHHCEEEEEEEEHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCHH
ELLASSLQVLGGSGYLQDYPIEQYIRDAKIDTLYEGTTSIQGQDLFFRKIVRDKGRALTT
HHHHHHHHHHCCCCCCCCCCHHHHHHHCCCHHHCCCCCCCCCCHHHHHHHHHHCCHHHHH
LFTQVQEFVKGEAGNGALRAERESLGAALDECQAMVGSMVGFLTATAQDKSQVYRVGLNT
HHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHEEEECCCH
TRLLMSIGDLVVGWLLLRGADAALRGLDGSPSERDRAFYEGKIAAARWFAANILPELRTR
HHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHH
RTVLEGTGLGLMEMSEAAF
HHHHCCCCCCHHHHHHHCC
>Mature Secondary Structure 
PRLPGEESFMGHYRSNLRDIEFNLFEVFGVDRTLGTGPFAEMDRDTAHEVLAELERVAV
CCCCCCHHHHHHHHCCCCCCCEEEEEEECCCCCCCCCCCHHCCHHHHHHHHHHHHHHHC
GPIAESFEDADRHPPTLDPATGTVTLPESFRKSFAAAQEGEWWRLYLPPHLGGMGAPPTI
CHHHHHHHHHCCCCCCCCCCCCEEECCHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCHH
AWAASELLLGANPAVFMYMAGPTFAAILEGIGTPWQKKIANWAIERHWGATMVLTEPDAG
HHHHHHHHCCCCCEEEEEECCCHHHHHHHHCCCCHHHHHHHHHHHHCCCEEEEEECCCCC
SDVGAGRARAVEQPDGTWHIEGVKRFITSGDWDIPENIFHLVLARPEGHGPGTKGLSMFV
CCCCCCCCCCCCCCCCCEEHHHHHHHHCCCCCCCHHHHHEEEEECCCCCCCCCCCCEEEE
VPKYLPDPETGAPGARNGAYVTNLEKKMGLKVSTTCELRFGEREPAVGWLVGDVHDGIAQ
EECCCCCCCCCCCCCCCCCEEEEHHHHHCCEEEEEEEEEECCCCCCCEEEEHHHHHHHHH
MFRVIEYARMMVGTKAIATLSTGYLNALAFARERIQGADLTRASDKTAPRVAIINHPDVR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCHHH
RMLMQQKAYAEGMRALVLYTATFQDAVTLAAARGEVDDNAVRMNDLLLPIVKGVGSERSY
HHHHHHHHHHHHCEEEEEEEEHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCHH
ELLASSLQVLGGSGYLQDYPIEQYIRDAKIDTLYEGTTSIQGQDLFFRKIVRDKGRALTT
HHHHHHHHHHCCCCCCCCCCHHHHHHHCCCHHHCCCCCCCCCCHHHHHHHHHHCCHHHHH
LFTQVQEFVKGEAGNGALRAERESLGAALDECQAMVGSMVGFLTATAQDKSQVYRVGLNT
HHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHEEEECCCH
TRLLMSIGDLVVGWLLLRGADAALRGLDGSPSERDRAFYEGKIAAARWFAANILPELRTR
HHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHH
RTVLEGTGLGLMEMSEAAF
HHHHCCCCCCHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7961409; 7610040; 9278503 [H]