Definition Frankia sp. EAN1pec chromosome, complete genome.
Accession NC_009921
Length 8,982,042

Click here to switch to the map view.

The map label for this gene is 158314827

Identifier: 158314827

GI number: 158314827

Start: 3545336

End: 3545563

Strand: Direct

Name: 158314827

Synonym: Franean1_3013

Alternate gene names: NA

Gene position: 3545336-3545563 (Clockwise)

Preceding gene: 158314826

Following gene: 158314832

Centisome position: 39.47

GC content: 72.37

Gene sequence:

>228_bases
GTGCCGCTGGCCGGCAACCTCCTCGCCGCCTACCACTGGCTGGGCCTCGCCCCCGGCGGGCTACGCAACGCCTCACTGAA
GCTGCTGCGGTTCCGGGTCTTCGACCTGCCCGCCCGGCTCACCCGCGGCCAACGGAAACGCTGGCTACACCTGCGCGCGG
ACTGGCCCTGGATCGACACCGTCCTCGACGGCTGGACCCGGATCCGGGTCCTACCCGCCGTGACCTGA

Upstream 100 bases:

>100_bases
CCACGTCCACGTCCAGAACGACGTCAAACAGGGCAAGGCACTCGGACTGGACCGCTGGCCGTCGCGGCACTGGAACATCA
ACAAGGCATGGACCCAGATC

Downstream 100 bases:

>100_bases
CCACCCTCCCCAAGCCCCTACCAGCGGGGAAGAACCCCCGGACCGTGGACCCGGCGCCGCGACACGACCGTCGCACCCCA
CCCCTGCCCACAGACAGGAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 75; Mature: 74

Protein sequence:

>75_residues
MPLAGNLLAAYHWLGLAPGGLRNASLKLLRFRVFDLPARLTRGQRKRWLHLRADWPWIDTVLDGWTRIRVLPAVT

Sequences:

>Translated_75_residues
MPLAGNLLAAYHWLGLAPGGLRNASLKLLRFRVFDLPARLTRGQRKRWLHLRADWPWIDTVLDGWTRIRVLPAVT
>Mature_74_residues
PLAGNLLAAYHWLGLAPGGLRNASLKLLRFRVFDLPARLTRGQRKRWLHLRADWPWIDTVLDGWTRIRVLPAVT

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 8655; Mature: 8524

Theoretical pI: Translated: 12.34; Mature: 12.34

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPLAGNLLAAYHWLGLAPGGLRNASLKLLRFRVFDLPARLTRGQRKRWLHLRADWPWIDT
CCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCHHHCCCCCCEEEEEECCCCHHHH
VLDGWTRIRVLPAVT
HHCCCEEEEEEECCC
>Mature Secondary Structure 
PLAGNLLAAYHWLGLAPGGLRNASLKLLRFRVFDLPARLTRGQRKRWLHLRADWPWIDT
CCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCHHHCCCCCCEEEEEECCCCHHHH
VLDGWTRIRVLPAVT
HHCCCEEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA