Definition Frankia sp. EAN1pec chromosome, complete genome.
Accession NC_009921
Length 8,982,042

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The map label for this gene is 158314794

Identifier: 158314794

GI number: 158314794

Start: 3503280

End: 3504569

Strand: Direct

Name: 158314794

Synonym: Franean1_2978

Alternate gene names: NA

Gene position: 3503280-3504569 (Clockwise)

Preceding gene: 158314793

Following gene: 158314795

Centisome position: 39.0

GC content: 71.01

Gene sequence:

>1290_bases
GTGACGGCGCCGATCGTCCTGCGCGCCGCACGCTGGCTGGACATCGACGCCGGAGAGGTCCGCGCGCCCGCGGAGATCGT
CGTAGAGGGCGACCGCATCACCGCGGTGAACCCCGCCACGCCGCCTGCGGGCAGCGTGGAACTCGACCTGGGCGACGTCA
CGTTGCTCCCCGGGTTGATGGACATGGAGCTCAACTTCCTCATCGGCGGGCCCGAGACCCCGACGGGACTGCCGCTGCCC
ATGCACGGCGTGCAGGACGACCCGGCGTACCGCACCATCCGAGGAACCATCAACGCCCGTACGACGCTGCACGCTGGCTT
CACCACGGTGCGCAACCTCGGTCTGATGGTCAAGACCGGGGGGTACCTGCTCGACGTAGCACTCCAGCGCGCCATCGACC
AGGGATGGGCCGAGGGCCCGCGGATCATCGCGGCCGGGCACGCGGTGACCCCGTACGGCGGGCACCTCGACCCGACCGTG
TTCCAGCGGCTGGCGCCCGGCGTCATGCCCCTGTCGATCGGCGAGGGGATCGCCAACGGTGTGGGCCAGGTGCGGGAATG
CGTCCGCTACCAGATCCGCCACGGTGCCAGGGTCATCAAGGTGTCGGCCTCCGGCGGGGTGATGTCGCACAGCACCGGGC
CGGGCGCCCAGCAGTACTCCGACGAGGAGCTGGCCGCGATCGCGGACGAGGCGCACCGGGCCGACATCCGGGTCGCCGCG
CACGCGGTGGGCGACCGGGCGATCCGGGCCTGCGTGCGTGCCGGGATCGACTGCATCGAGCACGGCTTCCTCGCCAGCGA
CGACACCCTCAAGCTGATGGCCGACCACGGCACGTTCCTGGTGTCGACGACCTACCTGACCGACGCGATGGACATCGCCC
GGGCCGCACCCGAGCTGCGCAAGAAGGCGGCAGTGGTGTTCCCCCAGGCCAGGGCGATGCTCCCGAAGGCGATCGCGGCC
GGGGTGCGGATCGCCTGCGGCACCGACGCGCCCGCCGTGCCACACGGTCACAACGCCAAGGAACTGATCGCACTGGTGTC
GCGGGGCATGACTCCCGTCCAGGCCCTGCGGGCCGCGACCGTCACCAGCGCGGAGCTCGTCGAACTGGACCACGAGCTCG
GACGGTTGAAGGCCGGCTACCTCGCCGACATCATCGCCGTCCCCGGCGACCCCTCCCAGGACATCACCCGCACCGAGGAC
GTCCGCTTCGTCATGAAGGACGGCCTCGTCCACCGCGACGACCGATCGTCACCGACCCGAACGGAGCACACATGGCAAGC
GGCGTCCTGA

Upstream 100 bases:

>100_bases
ACTCGCTGATCCAGGCCTCGTTCCCGGTCGAGGTATGGCACCAGCCGAAGGTCCCGGACACCGGTTCCTCGACCTTCGAC
TGCTTCACCGAGCCGGTGCC

Downstream 100 bases:

>100_bases
TCGTCGAGTCACGCCCCGCCTCGCCGGAGGAGGCCACCGCCTACCACGACTGGTACGACAACAAGCATCTCCCGGAGATC
CTGCAGATCGACGGCTTCGT

Product: amidohydrolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 429; Mature: 428

Protein sequence:

>429_residues
MTAPIVLRAARWLDIDAGEVRAPAEIVVEGDRITAVNPATPPAGSVELDLGDVTLLPGLMDMELNFLIGGPETPTGLPLP
MHGVQDDPAYRTIRGTINARTTLHAGFTTVRNLGLMVKTGGYLLDVALQRAIDQGWAEGPRIIAAGHAVTPYGGHLDPTV
FQRLAPGVMPLSIGEGIANGVGQVRECVRYQIRHGARVIKVSASGGVMSHSTGPGAQQYSDEELAAIADEAHRADIRVAA
HAVGDRAIRACVRAGIDCIEHGFLASDDTLKLMADHGTFLVSTTYLTDAMDIARAAPELRKKAAVVFPQARAMLPKAIAA
GVRIACGTDAPAVPHGHNAKELIALVSRGMTPVQALRAATVTSAELVELDHELGRLKAGYLADIIAVPGDPSQDITRTED
VRFVMKDGLVHRDDRSSPTRTEHTWQAAS

Sequences:

>Translated_429_residues
MTAPIVLRAARWLDIDAGEVRAPAEIVVEGDRITAVNPATPPAGSVELDLGDVTLLPGLMDMELNFLIGGPETPTGLPLP
MHGVQDDPAYRTIRGTINARTTLHAGFTTVRNLGLMVKTGGYLLDVALQRAIDQGWAEGPRIIAAGHAVTPYGGHLDPTV
FQRLAPGVMPLSIGEGIANGVGQVRECVRYQIRHGARVIKVSASGGVMSHSTGPGAQQYSDEELAAIADEAHRADIRVAA
HAVGDRAIRACVRAGIDCIEHGFLASDDTLKLMADHGTFLVSTTYLTDAMDIARAAPELRKKAAVVFPQARAMLPKAIAA
GVRIACGTDAPAVPHGHNAKELIALVSRGMTPVQALRAATVTSAELVELDHELGRLKAGYLADIIAVPGDPSQDITRTED
VRFVMKDGLVHRDDRSSPTRTEHTWQAAS
>Mature_428_residues
TAPIVLRAARWLDIDAGEVRAPAEIVVEGDRITAVNPATPPAGSVELDLGDVTLLPGLMDMELNFLIGGPETPTGLPLPM
HGVQDDPAYRTIRGTINARTTLHAGFTTVRNLGLMVKTGGYLLDVALQRAIDQGWAEGPRIIAAGHAVTPYGGHLDPTVF
QRLAPGVMPLSIGEGIANGVGQVRECVRYQIRHGARVIKVSASGGVMSHSTGPGAQQYSDEELAAIADEAHRADIRVAAH
AVGDRAIRACVRAGIDCIEHGFLASDDTLKLMADHGTFLVSTTYLTDAMDIARAAPELRKKAAVVFPQARAMLPKAIAAG
VRIACGTDAPAVPHGHNAKELIALVSRGMTPVQALRAATVTSAELVELDHELGRLKAGYLADIIAVPGDPSQDITRTEDV
RFVMKDGLVHRDDRSSPTRTEHTWQAAS

Specific function: Unknown

COG id: COG1228

COG function: function code Q; Imidazolonepropionase and related amidohydrolases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To S.coelicolor SCO1861 [H]

Homologues:

Organism=Saccharomyces cerevisiae, GI6322248, Length=337, Percent_Identity=32.6409495548961, Blast_Score=145, Evalue=1e-35,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006680 [H]

Pfam domain/function: PF01979 Amidohydro_1 [H]

EC number: NA

Molecular weight: Translated: 45440; Mature: 45308

Theoretical pI: Translated: 6.35; Mature: 6.35

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTAPIVLRAARWLDIDAGEVRAPAEIVVEGDRITAVNPATPPAGSVELDLGDVTLLPGLM
CCCCEEEEHHHEEECCCCCCCCCEEEEEECCEEEEECCCCCCCCCEEEECCCEEECCCCC
DMELNFLIGGPETPTGLPLPMHGVQDDPAYRTIRGTINARTTLHAGFTTVRNLGLMVKTG
CEEEEEEECCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCEEEHHHHHHHHHCCEEEECC
GYLLDVALQRAIDQGWAEGPRIIAAGHAVTPYGGHLDPTVFQRLAPGVMPLSIGEGIANG
CHHHHHHHHHHHHHCCCCCCEEEEECCEECCCCCCCCHHHHHHHCCCCEEEHHCCHHHHH
VGQVRECVRYQIRHGARVIKVSASGGVMSHSTGPGAQQYSDEELAAIADEAHRADIRVAA
HHHHHHHHHHHHHCCCEEEEEECCCCEEECCCCCCCHHCCCHHHHHHHHHHHHHHHHHHH
HAVGDRAIRACVRAGIDCIEHGFLASDDTLKLMADHGTFLVSTTYLTDAMDIARAAPELR
HHHHHHHHHHHHHHCHHHHHCCCCCCCCCEEEEECCCEEEEEEHHHHHHHHHHHHCHHHH
KKAAVVFPQARAMLPKAIAAGVRIACGTDAPAVPHGHNAKELIALVSRGMTPVQALRAAT
HHHEEECCHHHHHHHHHHHCCCEEEECCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHH
VTSAELVELDHELGRLKAGYLADIIAVPGDPSQDITRTEDVRFVMKDGLVHRDDRSSPTR
CCHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHCCCEECCCCCCCCC
TEHTWQAAS
CCCCCCCCC
>Mature Secondary Structure 
TAPIVLRAARWLDIDAGEVRAPAEIVVEGDRITAVNPATPPAGSVELDLGDVTLLPGLM
CCCEEEEHHHEEECCCCCCCCCEEEEEECCEEEEECCCCCCCCCEEEECCCEEECCCCC
DMELNFLIGGPETPTGLPLPMHGVQDDPAYRTIRGTINARTTLHAGFTTVRNLGLMVKTG
CEEEEEEECCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCEEEHHHHHHHHHCCEEEECC
GYLLDVALQRAIDQGWAEGPRIIAAGHAVTPYGGHLDPTVFQRLAPGVMPLSIGEGIANG
CHHHHHHHHHHHHHCCCCCCEEEEECCEECCCCCCCCHHHHHHHCCCCEEEHHCCHHHHH
VGQVRECVRYQIRHGARVIKVSASGGVMSHSTGPGAQQYSDEELAAIADEAHRADIRVAA
HHHHHHHHHHHHHCCCEEEEEECCCCEEECCCCCCCHHCCCHHHHHHHHHHHHHHHHHHH
HAVGDRAIRACVRAGIDCIEHGFLASDDTLKLMADHGTFLVSTTYLTDAMDIARAAPELR
HHHHHHHHHHHHHHCHHHHHCCCCCCCCCEEEEECCCEEEEEEHHHHHHHHHHHHCHHHH
KKAAVVFPQARAMLPKAIAAGVRIACGTDAPAVPHGHNAKELIALVSRGMTPVQALRAAT
HHHEEECCHHHHHHHHHHHCCCEEEECCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHH
VTSAELVELDHELGRLKAGYLADIIAVPGDPSQDITRTEDVRFVMKDGLVHRDDRSSPTR
CCHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHCCCEECCCCCCCCC
TEHTWQAAS
CCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]