| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158314794
Identifier: 158314794
GI number: 158314794
Start: 3503280
End: 3504569
Strand: Direct
Name: 158314794
Synonym: Franean1_2978
Alternate gene names: NA
Gene position: 3503280-3504569 (Clockwise)
Preceding gene: 158314793
Following gene: 158314795
Centisome position: 39.0
GC content: 71.01
Gene sequence:
>1290_bases GTGACGGCGCCGATCGTCCTGCGCGCCGCACGCTGGCTGGACATCGACGCCGGAGAGGTCCGCGCGCCCGCGGAGATCGT CGTAGAGGGCGACCGCATCACCGCGGTGAACCCCGCCACGCCGCCTGCGGGCAGCGTGGAACTCGACCTGGGCGACGTCA CGTTGCTCCCCGGGTTGATGGACATGGAGCTCAACTTCCTCATCGGCGGGCCCGAGACCCCGACGGGACTGCCGCTGCCC ATGCACGGCGTGCAGGACGACCCGGCGTACCGCACCATCCGAGGAACCATCAACGCCCGTACGACGCTGCACGCTGGCTT CACCACGGTGCGCAACCTCGGTCTGATGGTCAAGACCGGGGGGTACCTGCTCGACGTAGCACTCCAGCGCGCCATCGACC AGGGATGGGCCGAGGGCCCGCGGATCATCGCGGCCGGGCACGCGGTGACCCCGTACGGCGGGCACCTCGACCCGACCGTG TTCCAGCGGCTGGCGCCCGGCGTCATGCCCCTGTCGATCGGCGAGGGGATCGCCAACGGTGTGGGCCAGGTGCGGGAATG CGTCCGCTACCAGATCCGCCACGGTGCCAGGGTCATCAAGGTGTCGGCCTCCGGCGGGGTGATGTCGCACAGCACCGGGC CGGGCGCCCAGCAGTACTCCGACGAGGAGCTGGCCGCGATCGCGGACGAGGCGCACCGGGCCGACATCCGGGTCGCCGCG CACGCGGTGGGCGACCGGGCGATCCGGGCCTGCGTGCGTGCCGGGATCGACTGCATCGAGCACGGCTTCCTCGCCAGCGA CGACACCCTCAAGCTGATGGCCGACCACGGCACGTTCCTGGTGTCGACGACCTACCTGACCGACGCGATGGACATCGCCC GGGCCGCACCCGAGCTGCGCAAGAAGGCGGCAGTGGTGTTCCCCCAGGCCAGGGCGATGCTCCCGAAGGCGATCGCGGCC GGGGTGCGGATCGCCTGCGGCACCGACGCGCCCGCCGTGCCACACGGTCACAACGCCAAGGAACTGATCGCACTGGTGTC GCGGGGCATGACTCCCGTCCAGGCCCTGCGGGCCGCGACCGTCACCAGCGCGGAGCTCGTCGAACTGGACCACGAGCTCG GACGGTTGAAGGCCGGCTACCTCGCCGACATCATCGCCGTCCCCGGCGACCCCTCCCAGGACATCACCCGCACCGAGGAC GTCCGCTTCGTCATGAAGGACGGCCTCGTCCACCGCGACGACCGATCGTCACCGACCCGAACGGAGCACACATGGCAAGC GGCGTCCTGA
Upstream 100 bases:
>100_bases ACTCGCTGATCCAGGCCTCGTTCCCGGTCGAGGTATGGCACCAGCCGAAGGTCCCGGACACCGGTTCCTCGACCTTCGAC TGCTTCACCGAGCCGGTGCC
Downstream 100 bases:
>100_bases TCGTCGAGTCACGCCCCGCCTCGCCGGAGGAGGCCACCGCCTACCACGACTGGTACGACAACAAGCATCTCCCGGAGATC CTGCAGATCGACGGCTTCGT
Product: amidohydrolase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 429; Mature: 428
Protein sequence:
>429_residues MTAPIVLRAARWLDIDAGEVRAPAEIVVEGDRITAVNPATPPAGSVELDLGDVTLLPGLMDMELNFLIGGPETPTGLPLP MHGVQDDPAYRTIRGTINARTTLHAGFTTVRNLGLMVKTGGYLLDVALQRAIDQGWAEGPRIIAAGHAVTPYGGHLDPTV FQRLAPGVMPLSIGEGIANGVGQVRECVRYQIRHGARVIKVSASGGVMSHSTGPGAQQYSDEELAAIADEAHRADIRVAA HAVGDRAIRACVRAGIDCIEHGFLASDDTLKLMADHGTFLVSTTYLTDAMDIARAAPELRKKAAVVFPQARAMLPKAIAA GVRIACGTDAPAVPHGHNAKELIALVSRGMTPVQALRAATVTSAELVELDHELGRLKAGYLADIIAVPGDPSQDITRTED VRFVMKDGLVHRDDRSSPTRTEHTWQAAS
Sequences:
>Translated_429_residues MTAPIVLRAARWLDIDAGEVRAPAEIVVEGDRITAVNPATPPAGSVELDLGDVTLLPGLMDMELNFLIGGPETPTGLPLP MHGVQDDPAYRTIRGTINARTTLHAGFTTVRNLGLMVKTGGYLLDVALQRAIDQGWAEGPRIIAAGHAVTPYGGHLDPTV FQRLAPGVMPLSIGEGIANGVGQVRECVRYQIRHGARVIKVSASGGVMSHSTGPGAQQYSDEELAAIADEAHRADIRVAA HAVGDRAIRACVRAGIDCIEHGFLASDDTLKLMADHGTFLVSTTYLTDAMDIARAAPELRKKAAVVFPQARAMLPKAIAA GVRIACGTDAPAVPHGHNAKELIALVSRGMTPVQALRAATVTSAELVELDHELGRLKAGYLADIIAVPGDPSQDITRTED VRFVMKDGLVHRDDRSSPTRTEHTWQAAS >Mature_428_residues TAPIVLRAARWLDIDAGEVRAPAEIVVEGDRITAVNPATPPAGSVELDLGDVTLLPGLMDMELNFLIGGPETPTGLPLPM HGVQDDPAYRTIRGTINARTTLHAGFTTVRNLGLMVKTGGYLLDVALQRAIDQGWAEGPRIIAAGHAVTPYGGHLDPTVF QRLAPGVMPLSIGEGIANGVGQVRECVRYQIRHGARVIKVSASGGVMSHSTGPGAQQYSDEELAAIADEAHRADIRVAAH AVGDRAIRACVRAGIDCIEHGFLASDDTLKLMADHGTFLVSTTYLTDAMDIARAAPELRKKAAVVFPQARAMLPKAIAAG VRIACGTDAPAVPHGHNAKELIALVSRGMTPVQALRAATVTSAELVELDHELGRLKAGYLADIIAVPGDPSQDITRTEDV RFVMKDGLVHRDDRSSPTRTEHTWQAAS
Specific function: Unknown
COG id: COG1228
COG function: function code Q; Imidazolonepropionase and related amidohydrolases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: To S.coelicolor SCO1861 [H]
Homologues:
Organism=Saccharomyces cerevisiae, GI6322248, Length=337, Percent_Identity=32.6409495548961, Blast_Score=145, Evalue=1e-35,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006680 [H]
Pfam domain/function: PF01979 Amidohydro_1 [H]
EC number: NA
Molecular weight: Translated: 45440; Mature: 45308
Theoretical pI: Translated: 6.35; Mature: 6.35
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTAPIVLRAARWLDIDAGEVRAPAEIVVEGDRITAVNPATPPAGSVELDLGDVTLLPGLM CCCCEEEEHHHEEECCCCCCCCCEEEEEECCEEEEECCCCCCCCCEEEECCCEEECCCCC DMELNFLIGGPETPTGLPLPMHGVQDDPAYRTIRGTINARTTLHAGFTTVRNLGLMVKTG CEEEEEEECCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCEEEHHHHHHHHHCCEEEECC GYLLDVALQRAIDQGWAEGPRIIAAGHAVTPYGGHLDPTVFQRLAPGVMPLSIGEGIANG CHHHHHHHHHHHHHCCCCCCEEEEECCEECCCCCCCCHHHHHHHCCCCEEEHHCCHHHHH VGQVRECVRYQIRHGARVIKVSASGGVMSHSTGPGAQQYSDEELAAIADEAHRADIRVAA HHHHHHHHHHHHHCCCEEEEEECCCCEEECCCCCCCHHCCCHHHHHHHHHHHHHHHHHHH HAVGDRAIRACVRAGIDCIEHGFLASDDTLKLMADHGTFLVSTTYLTDAMDIARAAPELR HHHHHHHHHHHHHHCHHHHHCCCCCCCCCEEEEECCCEEEEEEHHHHHHHHHHHHCHHHH KKAAVVFPQARAMLPKAIAAGVRIACGTDAPAVPHGHNAKELIALVSRGMTPVQALRAAT HHHEEECCHHHHHHHHHHHCCCEEEECCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHH VTSAELVELDHELGRLKAGYLADIIAVPGDPSQDITRTEDVRFVMKDGLVHRDDRSSPTR CCHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHCCCEECCCCCCCCC TEHTWQAAS CCCCCCCCC >Mature Secondary Structure TAPIVLRAARWLDIDAGEVRAPAEIVVEGDRITAVNPATPPAGSVELDLGDVTLLPGLM CCCEEEEHHHEEECCCCCCCCCEEEEEECCEEEEECCCCCCCCCEEEECCCEEECCCCC DMELNFLIGGPETPTGLPLPMHGVQDDPAYRTIRGTINARTTLHAGFTTVRNLGLMVKTG CEEEEEEECCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCEEEHHHHHHHHHCCEEEECC GYLLDVALQRAIDQGWAEGPRIIAAGHAVTPYGGHLDPTVFQRLAPGVMPLSIGEGIANG CHHHHHHHHHHHHHCCCCCCEEEEECCEECCCCCCCCHHHHHHHCCCCEEEHHCCHHHHH VGQVRECVRYQIRHGARVIKVSASGGVMSHSTGPGAQQYSDEELAAIADEAHRADIRVAA HHHHHHHHHHHHHCCCEEEEEECCCCEEECCCCCCCHHCCCHHHHHHHHHHHHHHHHHHH HAVGDRAIRACVRAGIDCIEHGFLASDDTLKLMADHGTFLVSTTYLTDAMDIARAAPELR HHHHHHHHHHHHHHCHHHHHCCCCCCCCCEEEEECCCEEEEEEHHHHHHHHHHHHCHHHH KKAAVVFPQARAMLPKAIAAGVRIACGTDAPAVPHGHNAKELIALVSRGMTPVQALRAAT HHHEEECCHHHHHHHHHHHCCCEEEECCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHH VTSAELVELDHELGRLKAGYLADIIAVPGDPSQDITRTEDVRFVMKDGLVHRDDRSSPTR CCHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHCCCEECCCCCCCCC TEHTWQAAS CCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]