| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158314781
Identifier: 158314781
GI number: 158314781
Start: 3490375
End: 3492438
Strand: Direct
Name: 158314781
Synonym: Franean1_2964
Alternate gene names: NA
Gene position: 3490375-3492438 (Clockwise)
Preceding gene: 158314775
Following gene: 158314785
Centisome position: 38.86
GC content: 68.17
Gene sequence:
>2064_bases TTGCTCTTTGGTCGGAACAACTTCCTATCGGAGCCCCGCGTCTCCGTCGTCGCAGCCCCGGGGACACTCACACCGCGCAA TGGTCACCGAACGTCACGGGCCGTTGCTGGGAATGGCTCACTGACCAACCCCGCCTGGGTCAAATTCCTCCTGTATGACA ACAACGGGCAGATACGGGAGTCGCTGCGTCCGTTCTTCCCGAACCCGCGGAACACCCAGATGGTGGTTCGGCTAGCCGGT AACACCTCGGCCAAGGACGAGGGCGCCGGCGTGGCGACCGTCGAGAAGGCCATGGCCAGGCACACCTTCGACCACGCCAC CGTCGTCACCACCGGCGGCCCGGCGTTGCTGCGCGACATCAACGACTACCTGCACGGCGGCTTTCTCACCCTCGGCGGCA TCGCGCTGGCGCTGATGGCCGGCCTGCTGCTCGTAGCGTTCGCCGTCCGCTGGCGCCTGCTCCCGCTCGGCGTGGTCACG GTCGGCCTGGTCTGGGCCTTCGGTCTGGCCGGATACCTGGGTATCCCACTGTCCGTCATCACCATCGCCGGACTGCCGGT GCTGCTCGGAGTCGGCATCGACTTCGCCGTTCAGCTGCACTCCAGAATCGAGGAGGAGGTGTCCCTCGACCGGGCCGCCC ATCCGCTGCGGGAGACGCTGCGCAAGCTCGGCCCGGCCCTGCTCACCGCCACCCTCGCCAGCGTGCTGGCCTTCCTCGTG CTGGAGTTCAGCGCGGTGCCGATGCTGCGGGACTTCGGCACGCTGCTCGCCGTCGGCCTGCCGGTCATCGTCATCGCCAC GACCATGATCATGTTCGTCTCGCTGGGGTGGCGGGAATGCCGGTCGCCGACACCGGCCAGAGACTACACCGATGGCCCCC TTGCCCGCATCGTGATCCGCCTCGGCGGCCTGCCCCGAACGGCTGCCCTGCCACTGGCGGTGCTGTCCGTCGCGGTCTTC GTCGGCGGACTCTTCGCCGAGCAGAACCTGACCGTCCAGACCGACCCGGAAAGATGGGTCAGTCAGAACAGCCAGGTGGT GAAGGATATCGACCAGGTGCGCGAGCGGGTGGGTGCGTCGGGCGAGCTGGGCCTGTTCGTCCAGGCGGACGATGTCTTCA ACGACCGGACGACGCAGTACGTCTACCAGCTCGGCGCGCAGCGGACCGCCGAGAGCCAGGGCGATCTGCTCACCGCCTCC AGCCTGCCGACCACCATCGGACTCCTGCTCAAGGTGCCGGGGACCACCACTGTGCTGCCCACTGGCGCGGACGTCATCGC CGGGTTCAACGCCGCTCCCTGCGACATCCGAGTCGTCTCGGTCAGCATGACCGGCACGGCCGACCGGGCCGCGCTCTGCG CCGCGACGCTGCGGCCGGGCGACGCCCATCCGGGTGCCTTCAACCTCGTCTTTCGCCAGGCGGACGTGTCGCTGCAGGAG CGATCCGACGACCTCGACGCCCTCCGCGACCACCTTGCGCCGCCGGCGGGTGTCACCACCACTCTCTCGGGCTCGACTGT CGTCGCAGTGGCCCTGCTGCACAACTTCGAGGCGAACCGCACAGACCTGACCTACTACGCGCTCGGCATCGTGTTCGTCT TCGTCCTGCTGCGCCACCGCAACCTCGCCCGGGCACTGCTCTCGATGGCGCCGGTCCTGATCGCGGTGGGCCTTGGGTCC CTGCTGTCCTGGGCCGTCGGCCTGGAACTCAGCCCGCTGACCGCGGTCGGCGGGCCACTCGTGATCGCGTTGTGCACCGA GTTCACGACTCTTATGATATTTAGGTTCCTGGAGCAACGGCGGCGCGGCGACGCTCCACGCCAGGCAGTCGATGTCACCG CTGCCCGCACCGGCCGAGCGTTTATGGTCTCGGCGCTGGCTGCGATTATCGGCATCCTGGTGCTCGCGCTCAGCTCGTTG CCGCTGTTGCGGGACTTCGGCCTCGTCGTCGCGGTCAACGTGTTCGTCGCCCTGCTGTCGGCTCTGGTCGTGTTGCCGCC GCTGCTGGTCTGGGCGGACGAGCGAGGCTGGTTACATCGGGCACCTACGTCGCCGGACGCCTGA
Upstream 100 bases:
>100_bases TCCGCGACGAGAAGACCCGCCAGGCGGAAGACGGTGTGATCGCTGATGGGCAACTCGGCGGTGTATGTGAAACTCATGGA GGCGCGGGGTTCCTTCGGAG
Downstream 100 bases:
>100_bases TGGATGGTGGACGCTGGCTGGCAGGCCATCGGCGGCTACGTCCGTGTCAGGCACGCGCAGGAGCGGTGGTCCTGCGGTCA CCCATCGCCACCGGCGGAAG
Product: hypothetical protein
Products: NA
Alternate protein names: Hydrophobe/Amphiphile Efflux-3 Family Efflux Transporter; HAE1 Family Efflux Transporter; Efflux Transporter Hydrophobe/Amphiphile Efflux-3 Family; MMPL Domain-Containing Protein; Efflux Transporter Hydrophobe/Amphiphile Efflux-3 Family; MMPL Family Protein; Hydrophobe/Amphiphile Efflux-3 Family Transporter; Protein Export Membrane Protein; RND Efflux Transporter
Number of amino acids: Translated: 687; Mature: 687
Protein sequence:
>687_residues MLFGRNNFLSEPRVSVVAAPGTLTPRNGHRTSRAVAGNGSLTNPAWVKFLLYDNNGQIRESLRPFFPNPRNTQMVVRLAG NTSAKDEGAGVATVEKAMARHTFDHATVVTTGGPALLRDINDYLHGGFLTLGGIALALMAGLLLVAFAVRWRLLPLGVVT VGLVWAFGLAGYLGIPLSVITIAGLPVLLGVGIDFAVQLHSRIEEEVSLDRAAHPLRETLRKLGPALLTATLASVLAFLV LEFSAVPMLRDFGTLLAVGLPVIVIATTMIMFVSLGWRECRSPTPARDYTDGPLARIVIRLGGLPRTAALPLAVLSVAVF VGGLFAEQNLTVQTDPERWVSQNSQVVKDIDQVRERVGASGELGLFVQADDVFNDRTTQYVYQLGAQRTAESQGDLLTAS SLPTTIGLLLKVPGTTTVLPTGADVIAGFNAAPCDIRVVSVSMTGTADRAALCAATLRPGDAHPGAFNLVFRQADVSLQE RSDDLDALRDHLAPPAGVTTTLSGSTVVAVALLHNFEANRTDLTYYALGIVFVFVLLRHRNLARALLSMAPVLIAVGLGS LLSWAVGLELSPLTAVGGPLVIALCTEFTTLMIFRFLEQRRRGDAPRQAVDVTAARTGRAFMVSALAAIIGILVLALSSL PLLRDFGLVVAVNVFVALLSALVVLPPLLVWADERGWLHRAPTSPDA
Sequences:
>Translated_687_residues MLFGRNNFLSEPRVSVVAAPGTLTPRNGHRTSRAVAGNGSLTNPAWVKFLLYDNNGQIRESLRPFFPNPRNTQMVVRLAG NTSAKDEGAGVATVEKAMARHTFDHATVVTTGGPALLRDINDYLHGGFLTLGGIALALMAGLLLVAFAVRWRLLPLGVVT VGLVWAFGLAGYLGIPLSVITIAGLPVLLGVGIDFAVQLHSRIEEEVSLDRAAHPLRETLRKLGPALLTATLASVLAFLV LEFSAVPMLRDFGTLLAVGLPVIVIATTMIMFVSLGWRECRSPTPARDYTDGPLARIVIRLGGLPRTAALPLAVLSVAVF VGGLFAEQNLTVQTDPERWVSQNSQVVKDIDQVRERVGASGELGLFVQADDVFNDRTTQYVYQLGAQRTAESQGDLLTAS SLPTTIGLLLKVPGTTTVLPTGADVIAGFNAAPCDIRVVSVSMTGTADRAALCAATLRPGDAHPGAFNLVFRQADVSLQE RSDDLDALRDHLAPPAGVTTTLSGSTVVAVALLHNFEANRTDLTYYALGIVFVFVLLRHRNLARALLSMAPVLIAVGLGS LLSWAVGLELSPLTAVGGPLVIALCTEFTTLMIFRFLEQRRRGDAPRQAVDVTAARTGRAFMVSALAAIIGILVLALSSL PLLRDFGLVVAVNVFVALLSALVVLPPLLVWADERGWLHRAPTSPDA >Mature_687_residues MLFGRNNFLSEPRVSVVAAPGTLTPRNGHRTSRAVAGNGSLTNPAWVKFLLYDNNGQIRESLRPFFPNPRNTQMVVRLAG NTSAKDEGAGVATVEKAMARHTFDHATVVTTGGPALLRDINDYLHGGFLTLGGIALALMAGLLLVAFAVRWRLLPLGVVT VGLVWAFGLAGYLGIPLSVITIAGLPVLLGVGIDFAVQLHSRIEEEVSLDRAAHPLRETLRKLGPALLTATLASVLAFLV LEFSAVPMLRDFGTLLAVGLPVIVIATTMIMFVSLGWRECRSPTPARDYTDGPLARIVIRLGGLPRTAALPLAVLSVAVF VGGLFAEQNLTVQTDPERWVSQNSQVVKDIDQVRERVGASGELGLFVQADDVFNDRTTQYVYQLGAQRTAESQGDLLTAS SLPTTIGLLLKVPGTTTVLPTGADVIAGFNAAPCDIRVVSVSMTGTADRAALCAATLRPGDAHPGAFNLVFRQADVSLQE RSDDLDALRDHLAPPAGVTTTLSGSTVVAVALLHNFEANRTDLTYYALGIVFVFVLLRHRNLARALLSMAPVLIAVGLGS LLSWAVGLELSPLTAVGGPLVIALCTEFTTLMIFRFLEQRRRGDAPRQAVDVTAARTGRAFMVSALAAIIGILVLALSSL PLLRDFGLVVAVNVFVALLSALVVLPPLLVWADERGWLHRAPTSPDA
Specific function: Unknown
COG id: COG1033
COG function: function code R; Predicted exporters of the RND superfamily
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 73077; Mature: 73077
Theoretical pI: Translated: 8.34; Mature: 8.34
Prosite motif: PS50156 SSD
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLFGRNNFLSEPRVSVVAAPGTLTPRNGHRTSRAVAGNGSLTNPAWVKFLLYDNNGQIRE CCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCEEECCCCCCCHHEEEEEEECCCCHHHH SLRPFFPNPRNTQMVVRLAGNTSAKDEGAGVATVEKAMARHTFDHATVVTTGGPALLRDI HCCCCCCCCCCCEEEEEEECCCCCCCCCCCHHHHHHHHHHHCCCCEEEEECCCHHHHHHH NDYLHGGFLTLGGIALALMAGLLLVAFAVRWRLLPLGVVTVGLVWAFGLAGYLGIPLSVI HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH TIAGLPVLLGVGIDFAVQLHSRIEEEVSLDRAAHPLRETLRKLGPALLTATLASVLAFLV HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LEFSAVPMLRDFGTLLAVGLPVIVIATTMIMFVSLGWRECRSPTPARDYTDGPLARIVIR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCCCCCCHHHHHHHH LGGLPRTAALPLAVLSVAVFVGGLFAEQNLTVQTDPERWVSQNSQVVKDIDQVRERVGAS HCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEECHHHHHCCCHHHHHHHHHHHHHHCCC GELGLFVQADDVFNDRTTQYVYQLGAQRTAESQGDLLTASSLPTTIGLLLKVPGTTTVLP CCEEEEEEECCCCCCHHHHHHHHHHHHHCCCCCCCEEECCCCCHHHHHEEECCCCCEEEC TGADVIAGFNAAPCDIRVVSVSMTGTADRAALCAATLRPGDAHPGAFNLVFRQADVSLQE CCHHHHCCCCCCCCEEEEEEEEECCCCHHHHHHHHHCCCCCCCCCCEEEEEECCCCCHHH RSDDLDALRDHLAPPAGVTTTLSGSTVVAVALLHNFEANRTDLTYYALGIVFVFVLLRHR CCCHHHHHHHHCCCCCCCEEEECCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCC NLARALLSMAPVLIAVGLGSLLSWAVGLELSPLTAVGGPLVIALCTEFTTLMIFRFLEQR HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHH RRGDAPRQAVDVTAARTGRAFMVSALAAIIGILVLALSSLPLLRDFGLVVAVNVFVALLS HCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH ALVVLPPLLVWADERGWLHRAPTSPDA HHHHHCCHHEEECCCCCEECCCCCCCC >Mature Secondary Structure MLFGRNNFLSEPRVSVVAAPGTLTPRNGHRTSRAVAGNGSLTNPAWVKFLLYDNNGQIRE CCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCEEECCCCCCCHHEEEEEEECCCCHHHH SLRPFFPNPRNTQMVVRLAGNTSAKDEGAGVATVEKAMARHTFDHATVVTTGGPALLRDI HCCCCCCCCCCCEEEEEEECCCCCCCCCCCHHHHHHHHHHHCCCCEEEEECCCHHHHHHH NDYLHGGFLTLGGIALALMAGLLLVAFAVRWRLLPLGVVTVGLVWAFGLAGYLGIPLSVI HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH TIAGLPVLLGVGIDFAVQLHSRIEEEVSLDRAAHPLRETLRKLGPALLTATLASVLAFLV HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LEFSAVPMLRDFGTLLAVGLPVIVIATTMIMFVSLGWRECRSPTPARDYTDGPLARIVIR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCCCCCCHHHHHHHH LGGLPRTAALPLAVLSVAVFVGGLFAEQNLTVQTDPERWVSQNSQVVKDIDQVRERVGAS HCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEECHHHHHCCCHHHHHHHHHHHHHHCCC GELGLFVQADDVFNDRTTQYVYQLGAQRTAESQGDLLTASSLPTTIGLLLKVPGTTTVLP CCEEEEEEECCCCCCHHHHHHHHHHHHHCCCCCCCEEECCCCCHHHHHEEECCCCCEEEC TGADVIAGFNAAPCDIRVVSVSMTGTADRAALCAATLRPGDAHPGAFNLVFRQADVSLQE CCHHHHCCCCCCCCEEEEEEEEECCCCHHHHHHHHHCCCCCCCCCCEEEEEECCCCCHHH RSDDLDALRDHLAPPAGVTTTLSGSTVVAVALLHNFEANRTDLTYYALGIVFVFVLLRHR CCCHHHHHHHHCCCCCCCEEEECCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCC NLARALLSMAPVLIAVGLGSLLSWAVGLELSPLTAVGGPLVIALCTEFTTLMIFRFLEQR HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHH RRGDAPRQAVDVTAARTGRAFMVSALAAIIGILVLALSSLPLLRDFGLVVAVNVFVALLS HCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH ALVVLPPLLVWADERGWLHRAPTSPDA HHHHHCCHHEEECCCCCEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA