| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158314772
Identifier: 158314772
GI number: 158314772
Start: 3477569
End: 3478816
Strand: Direct
Name: 158314772
Synonym: Franean1_2954
Alternate gene names: NA
Gene position: 3477569-3478816 (Clockwise)
Preceding gene: 158314771
Following gene: 158314773
Centisome position: 38.72
GC content: 64.02
Gene sequence:
>1248_bases ATGAAGAGATTATGTGTCGTCGTCGTGGTGGCGGCGCTCGCCGCGGTAATACTGGCTGCCTGCGGCTCCGGCTCCGGCTC CGGCTCCAGCGCCGGCGGCGGCATTGGCACAGCAAAAGGGGACCCGATCGTCGTCGGGACGATTTGCAGCTGCTCGGGAG CCCAGGCGGCCTCGACCGCCAAGGTCAAGGATGTCGCCCAGGTCTGGGCCGAGTCGGTCAACGCCCGCGGTGGCATCAAC GGCCATCCCGTAAAAATGATTGTCGAGGACGATGCCGGCGACCCGGCCAAGGCTCTGCGGGCCGCGAAGAAACTGGTCGA GCAGGACCACGTCGTTGCCATCGTCGGCCAGATGAGCCTCGCCGACGCCACATGGGCCGACTATACGTCGAAGAAGGGTG TGCCGGTGGTCGGCGGGATCTCCGCCACGATCCCGTACCTTACGGAGCCGACCTTCTTCGCCTCGGGTACCACATTGCCG GCGCTTGTGGCAGGCACCCTGCTGACGGGAAAGGAAGCAGGCAAGACCAAGCTCGGGGTATTGTACTGCTCCGAGTCGCC CTCGTGCTCGCAACTTGACCTGTTCACCAAGGCAGCTGCTGGGATTGTGGGAGGCATCATTGTCACGTCGGCGAAGATAT CCTCGACCGCGCCGAACTACACAGCTCCTTGCCTGGGACTGAAGCGGGCCGGTGTGGACAGCATAACCCTCTCGGCGAAC AACACGGTCGTAGCGCGCGTCATGGAGGCCTGCGCGCAGCAGGGACTCCATCCCACCATGGTCAGCCAATTCGCCACGAG TGCACCGGAGTGGCTTCGTAATCCCAACTTCGAGGGCGCTTTGCTGACATCGCAGACCGCCGTGCCGGTCGCGTCCGCAC CAGCCGGCAAAGAGTTCCTGGACGCAGTGGCAAAATTCGCCCCTGGGCTCACCCGTGACCCTCAGTTCACCCCGGCTACG ATCCTGGCATGGGCCGGCGGAAAGCTGTTCGAGGCGGCGGCCAAGGCAGGTGGTGTCGGACCGAACTCGACGCCCACTGA TGTCATGAAGGGCCTCTACACCCTCAAGAACGAGACGCTCGGTGGCCTCGCTCCGCCACTAACCTTCACGAAGGGCAAGC CCGCTGTCCCGACCTGCTACTTCACCACCCAGATCCATAACGGCGAGTACATACTGCCGGATGGGCCCGCGCCTAAGTGC CTAACCCCGTCCCAGGTCGAGGCGTTCGGGAAATTGCTCGCGGGATAA
Upstream 100 bases:
>100_bases CTTGTGTCGTCGCTTCGAAATATTGCGTTGCCCTTGTTCGCCGGGGGTGGGATGGAATTCATTAAGTCATGTCAAAATCT TCTGAAGGGTGACCATTGCT
Downstream 100 bases:
>100_bases GCGCATCCCTCAACAGGAGATGTAGACCAAGAACCCGGACGACCAAGATCCCCGCGCCGCAACTTGGCGGCGTGGGGACC GATGTAATGGCCGCGCCCCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 415; Mature: 415
Protein sequence:
>415_residues MKRLCVVVVVAALAAVILAACGSGSGSGSSAGGGIGTAKGDPIVVGTICSCSGAQAASTAKVKDVAQVWAESVNARGGIN GHPVKMIVEDDAGDPAKALRAAKKLVEQDHVVAIVGQMSLADATWADYTSKKGVPVVGGISATIPYLTEPTFFASGTTLP ALVAGTLLTGKEAGKTKLGVLYCSESPSCSQLDLFTKAAAGIVGGIIVTSAKISSTAPNYTAPCLGLKRAGVDSITLSAN NTVVARVMEACAQQGLHPTMVSQFATSAPEWLRNPNFEGALLTSQTAVPVASAPAGKEFLDAVAKFAPGLTRDPQFTPAT ILAWAGGKLFEAAAKAGGVGPNSTPTDVMKGLYTLKNETLGGLAPPLTFTKGKPAVPTCYFTTQIHNGEYILPDGPAPKC LTPSQVEAFGKLLAG
Sequences:
>Translated_415_residues MKRLCVVVVVAALAAVILAACGSGSGSGSSAGGGIGTAKGDPIVVGTICSCSGAQAASTAKVKDVAQVWAESVNARGGIN GHPVKMIVEDDAGDPAKALRAAKKLVEQDHVVAIVGQMSLADATWADYTSKKGVPVVGGISATIPYLTEPTFFASGTTLP ALVAGTLLTGKEAGKTKLGVLYCSESPSCSQLDLFTKAAAGIVGGIIVTSAKISSTAPNYTAPCLGLKRAGVDSITLSAN NTVVARVMEACAQQGLHPTMVSQFATSAPEWLRNPNFEGALLTSQTAVPVASAPAGKEFLDAVAKFAPGLTRDPQFTPAT ILAWAGGKLFEAAAKAGGVGPNSTPTDVMKGLYTLKNETLGGLAPPLTFTKGKPAVPTCYFTTQIHNGEYILPDGPAPKC LTPSQVEAFGKLLAG >Mature_415_residues MKRLCVVVVVAALAAVILAACGSGSGSGSSAGGGIGTAKGDPIVVGTICSCSGAQAASTAKVKDVAQVWAESVNARGGIN GHPVKMIVEDDAGDPAKALRAAKKLVEQDHVVAIVGQMSLADATWADYTSKKGVPVVGGISATIPYLTEPTFFASGTTLP ALVAGTLLTGKEAGKTKLGVLYCSESPSCSQLDLFTKAAAGIVGGIIVTSAKISSTAPNYTAPCLGLKRAGVDSITLSAN NTVVARVMEACAQQGLHPTMVSQFATSAPEWLRNPNFEGALLTSQTAVPVASAPAGKEFLDAVAKFAPGLTRDPQFTPAT ILAWAGGKLFEAAAKAGGVGPNSTPTDVMKGLYTLKNETLGGLAPPLTFTKGKPAVPTCYFTTQIHNGEYILPDGPAPKC LTPSQVEAFGKLLAG
Specific function: Unknown
COG id: COG0683
COG function: function code E; ABC-type branched-chain amino acid transport systems, periplasmic component
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 41943; Mature: 41943
Theoretical pI: Translated: 8.40; Mature: 8.40
Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS00583 PFKB_KINASES_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRLCVVVVVAALAAVILAACGSGSGSGSSAGGGIGTAKGDPIVVGTICSCSGAQAASTA CCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCHHHHH KVKDVAQVWAESVNARGGINGHPVKMIVEDDAGDPAKALRAAKKLVEQDHVVAIVGQMSL HHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHCCCCEEEEEECHHH ADATWADYTSKKGVPVVGGISATIPYLTEPTFFASGTTLPALVAGTLLTGKEAGKTKLGV CCCHHHHHCCCCCCCEECCCCCCCCCCCCCCEEECCCCHHHHHHHHHHCCCCCCCCEEEE LYCSESPSCSQLDLFTKAAAGIVGGIIVTSAKISSTAPNYTAPCLGLKRAGVDSITLSAN EEECCCCCCCHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCCCCCCHHHCCCCEEEEECC NTVVARVMEACAQQGLHPTMVSQFATSAPEWLRNPNFEGALLTSQTAVPVASAPAGKEFL CHHHHHHHHHHHHCCCCHHHHHHHHHCCHHHHCCCCCCCEEEECCCCCCCCCCCCCHHHH DAVAKFAPGLTRDPQFTPATILAWAGGKLFEAAAKAGGVGPNSTPTDVMKGLYTLKNETL HHHHHHCCCCCCCCCCCCCEEEEECCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCC GGLAPPLTFTKGKPAVPTCYFTTQIHNGEYILPDGPAPKCLTPSQVEAFGKLLAG CCCCCCCEECCCCCCCCEEEEEEEECCCCEECCCCCCCCCCCHHHHHHHHHHHCC >Mature Secondary Structure MKRLCVVVVVAALAAVILAACGSGSGSGSSAGGGIGTAKGDPIVVGTICSCSGAQAASTA CCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCHHHHH KVKDVAQVWAESVNARGGINGHPVKMIVEDDAGDPAKALRAAKKLVEQDHVVAIVGQMSL HHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHCCCCEEEEEECHHH ADATWADYTSKKGVPVVGGISATIPYLTEPTFFASGTTLPALVAGTLLTGKEAGKTKLGV CCCHHHHHCCCCCCCEECCCCCCCCCCCCCCEEECCCCHHHHHHHHHHCCCCCCCCEEEE LYCSESPSCSQLDLFTKAAAGIVGGIIVTSAKISSTAPNYTAPCLGLKRAGVDSITLSAN EEECCCCCCCHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCCCCCCHHHCCCCEEEEECC NTVVARVMEACAQQGLHPTMVSQFATSAPEWLRNPNFEGALLTSQTAVPVASAPAGKEFL CHHHHHHHHHHHHCCCCHHHHHHHHHCCHHHHCCCCCCCEEEECCCCCCCCCCCCCHHHH DAVAKFAPGLTRDPQFTPATILAWAGGKLFEAAAKAGGVGPNSTPTDVMKGLYTLKNETL HHHHHHCCCCCCCCCCCCCEEEEECCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCC GGLAPPLTFTKGKPAVPTCYFTTQIHNGEYILPDGPAPKCLTPSQVEAFGKLLAG CCCCCCCEECCCCCCCCEEEEEEEECCCCEECCCCCCCCCCCHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA