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The map label for this gene is crtI [H]

Identifier: 158314767

GI number: 158314767

Start: 3470487

End: 3472040

Strand: Direct

Name: crtI [H]

Synonym: Franean1_2949

Alternate gene names: 158314767

Gene position: 3470487-3472040 (Clockwise)

Preceding gene: 158314766

Following gene: 158314768

Centisome position: 38.64

GC content: 70.21

Gene sequence:

>1554_bases
ATGCCGCGTTCTGCAGTTGTGATCGGAGCCGGTCACAACGGCCTCACCGCCGCCTGCTACCTGGCCCGTGCGAACGTTCA
GGTGACCGTCTTCGAGGCGTCCGAACACATCGGCGGCATGACTGCGACCCTGCCATTGATCCCCGAGGCGCCCGAGCACC
TGGTCAGCCCCTGCGCCATCGACGCCGTGTACTGGCAGGCCTCGGGAGTAGGCGATGAGCTGGGCCTGTCCCGGTTCGGC
CTGCGGACCGTCGAGCACGACCCCGCATGGGCCTGGCTGGGCCCGAACGGTGAGTCGCTCGTCCTGCGCAAGGACGTCGA
GGCCACGATCGCCGACATTCGCCGCTTCTCCCCGGCGGACGCCGAGACCTATCGCCAGTTTGCTGCCACAGCCCAGCGTG
CACTGGCCATTCAGGACCTCTATGGAGCCCGGCACCCGTCGGCACCGGGTCGCCGCGTCTTACTCAAGGCCATCCGGGAG
CTGCGCGACCGCGAGGTCCGACGCCTGCTCGGCGCGGCCCTGAGCACCTCGGCCGCCGACCTCATCTCCACCACGTTCAC
CAGCGAGGCCGTGCGTGGGGCCTTCGCCTGCATGGCCAGCATCCTCGGGTCGGTCATCGCCGACAGCAGCGGTATTGGCA
TTCTGGCCACAGCTCCCCTGCACACCTACGGCGTGCTGCGCCCGATCGGCGGCATGCAGGCCATCCCGGACGCTCTGCAT
CGCTGTCTCACCGACGCGGGCGGCGTCGTGAAGGTCGCCGCGCCAGTGACGACGATCCTGGTCGAGCGCGGTGCCGCGGT
GGGCGTCGTCCTCGCCGACGGCACAACGGTGCGCGCCGACCACGTGGTGTGCGCGATCCCCCCACAGGTGACCGCTCGAC
TCCTCGCCGACAGCGACCTGCCGGGTGTCGAAAGCCTGCGCCGCGCGCCCGCTAACGCCTCCGGCGTCGGTTGTCTCACG
ATGGGGCTCGCGCTGCGCGGGCAGGTCGCGATACCGGACCACCAAGCCGCTCGCCACGACAGCGTCGACCTGCGAGAGCC
AACCCTCTTCTTCGGCACCCTCGACGAGGTGGAGTCGGCCGAGCGAGAGGCCCGCAGCGGACTGACACCCGCGAACCCCC
CGTGGACAGCGACCATCCTGTCCGCCCGTGACCCCTCCCAGGCCCCGCAGGGGCAGGACATCCTCTACGCGTACGGCCCA
GCGCCGGTTCGGCCGCACGCCGGCTGGCAAACGGCGCGGAAGTCGGCCGAGGAAGCGCTCGTTGGTGCGCTCTCCCAGGC
CCTCGACGGCCCCGAGACCCTGGAGATCGGTCGCTTCGTCGAAACTCCCGAGGCGCTCGAGCAAAGACTCGGTGCGCCGA
ACGGGTGCATCTACCACGTGGACCAGAGTGTGACCCGTATCGGTCCATTGCGCCCCGCTCTCGGCTGGGCAGGCCGGACC
CCACGCGTCCCTGGGCTCGTCCTCTCGGGCGCGGGAAGCCACCCGGGAGGAGGAGTCTCCGGCCTCCCGGGACAGATCGC
TGCCCAGACCGTCCTAAGAACCTTCAAGCCCTGA

Upstream 100 bases:

>100_bases
TGGAGCTCGGATTCTCTCCCGAGCATGTGGACGACCTGCGCCGAAGCGGCGTTGTCGCGTAAATGATCCTCTTCTCAGTG
GCATAGGCGAGGCGAAAGCG

Downstream 100 bases:

>100_bases
CCCCGCACAGCTCCATCGCACCAATACAAAACCCTGTGGCCCCCGATTAGAAACAGCCTCGGCATCCGCCCGGACTCTAC
GAGGACTTGCCAATGATTCC

Product: FAD dependent oxidoreductase

Products: NA

Alternate protein names: Phytoene desaturase [H]

Number of amino acids: Translated: 517; Mature: 516

Protein sequence:

>517_residues
MPRSAVVIGAGHNGLTAACYLARANVQVTVFEASEHIGGMTATLPLIPEAPEHLVSPCAIDAVYWQASGVGDELGLSRFG
LRTVEHDPAWAWLGPNGESLVLRKDVEATIADIRRFSPADAETYRQFAATAQRALAIQDLYGARHPSAPGRRVLLKAIRE
LRDREVRRLLGAALSTSAADLISTTFTSEAVRGAFACMASILGSVIADSSGIGILATAPLHTYGVLRPIGGMQAIPDALH
RCLTDAGGVVKVAAPVTTILVERGAAVGVVLADGTTVRADHVVCAIPPQVTARLLADSDLPGVESLRRAPANASGVGCLT
MGLALRGQVAIPDHQAARHDSVDLREPTLFFGTLDEVESAEREARSGLTPANPPWTATILSARDPSQAPQGQDILYAYGP
APVRPHAGWQTARKSAEEALVGALSQALDGPETLEIGRFVETPEALEQRLGAPNGCIYHVDQSVTRIGPLRPALGWAGRT
PRVPGLVLSGAGSHPGGGVSGLPGQIAAQTVLRTFKP

Sequences:

>Translated_517_residues
MPRSAVVIGAGHNGLTAACYLARANVQVTVFEASEHIGGMTATLPLIPEAPEHLVSPCAIDAVYWQASGVGDELGLSRFG
LRTVEHDPAWAWLGPNGESLVLRKDVEATIADIRRFSPADAETYRQFAATAQRALAIQDLYGARHPSAPGRRVLLKAIRE
LRDREVRRLLGAALSTSAADLISTTFTSEAVRGAFACMASILGSVIADSSGIGILATAPLHTYGVLRPIGGMQAIPDALH
RCLTDAGGVVKVAAPVTTILVERGAAVGVVLADGTTVRADHVVCAIPPQVTARLLADSDLPGVESLRRAPANASGVGCLT
MGLALRGQVAIPDHQAARHDSVDLREPTLFFGTLDEVESAEREARSGLTPANPPWTATILSARDPSQAPQGQDILYAYGP
APVRPHAGWQTARKSAEEALVGALSQALDGPETLEIGRFVETPEALEQRLGAPNGCIYHVDQSVTRIGPLRPALGWAGRT
PRVPGLVLSGAGSHPGGGVSGLPGQIAAQTVLRTFKP
>Mature_516_residues
PRSAVVIGAGHNGLTAACYLARANVQVTVFEASEHIGGMTATLPLIPEAPEHLVSPCAIDAVYWQASGVGDELGLSRFGL
RTVEHDPAWAWLGPNGESLVLRKDVEATIADIRRFSPADAETYRQFAATAQRALAIQDLYGARHPSAPGRRVLLKAIREL
RDREVRRLLGAALSTSAADLISTTFTSEAVRGAFACMASILGSVIADSSGIGILATAPLHTYGVLRPIGGMQAIPDALHR
CLTDAGGVVKVAAPVTTILVERGAAVGVVLADGTTVRADHVVCAIPPQVTARLLADSDLPGVESLRRAPANASGVGCLTM
GLALRGQVAIPDHQAARHDSVDLREPTLFFGTLDEVESAEREARSGLTPANPPWTATILSARDPSQAPQGQDILYAYGPA
PVRPHAGWQTARKSAEEALVGALSQALDGPETLEIGRFVETPEALEQRLGAPNGCIYHVDQSVTRIGPLRPALGWAGRTP
RVPGLVLSGAGSHPGGGVSGLPGQIAAQTVLRTFKP

Specific function: This enzyme converts phytoene into zeta-carotene via the intermediary of phytofluene by the symmetrical introduction of two double bonds at the C-11 and C-11' positions of phytoene [H]

COG id: COG1233

COG function: function code Q; Phytoene dehydrogenase and related proteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the carotenoid/retinoid oxidoreductase family [H]

Homologues:

Organism=Homo sapiens, GI229577391, Length=565, Percent_Identity=28.4955752212389, Blast_Score=134, Evalue=2e-31,
Organism=Caenorhabditis elegans, GI17540238, Length=560, Percent_Identity=24.4642857142857, Blast_Score=129, Evalue=5e-30,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002937
- InterPro:   IPR008150
- InterPro:   IPR014105 [H]

Pfam domain/function: PF01593 Amino_oxidase [H]

EC number: NA

Molecular weight: Translated: 54028; Mature: 53897

Theoretical pI: Translated: 6.70; Mature: 6.70

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPRSAVVIGAGHNGLTAACYLARANVQVTVFEASEHIGGMTATLPLIPEAPEHLVSPCAI
CCCCEEEEECCCCCCCCEEEEEECCEEEEEEECCHHCCCEEEEECCCCCCHHHHHCCHHH
DAVYWQASGVGDELGLSRFGLRTVEHDPAWAWLGPNGESLVLRKDVEATIADIRRFSPAD
HEEEEECCCCCHHHCHHHHCCEEECCCCCEEEECCCCCEEEEECCHHHHHHHHHHCCCCC
AETYRQFAATAQRALAIQDLYGARHPSAPGRRVLLKAIRELRDREVRRLLGAALSTSAAD
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LISTTFTSEAVRGAFACMASILGSVIADSSGIGILATAPLHTYGVLRPIGGMQAIPDALH
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCHHHHHHHHCCCCHHHHHHHHH
RCLTDAGGVVKVAAPVTTILVERGAAVGVVLADGTTVRADHVVCAIPPQVTARLLADSDL
HHHHCCCCEEEEHHHHHHHHHHCCCEEEEEEECCCEEEECCEEEECCHHHHHHHHHCCCC
PGVESLRRAPANASGVGCLTMGLALRGQVAIPDHQAARHDSVDLREPTLFFGTLDEVESA
CCHHHHHHCCCCCCCCHHHHHHHHHCCCEECCCCHHCCCCCCCCCCCEEEEECHHHHHHH
EREARSGLTPANPPWTATILSARDPSQAPQGQDILYAYGPAPVRPHAGWQTARKSAEEAL
HHHHHCCCCCCCCCCEEEEEECCCCCCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHH
VGALSQALDGPETLEIGRFVETPEALEQRLGAPNGCIYHVDQSVTRIGPLRPALGWAGRT
HHHHHHHCCCCCHHHHCCCCCCHHHHHHHCCCCCCEEEECCCHHHHHCCCCHHHCCCCCC
PRVPGLVLSGAGSHPGGGVSGLPGQIAAQTVLRTFKP
CCCCCEEEECCCCCCCCCCCCCCHHHHHHHHHHHCCC
>Mature Secondary Structure 
PRSAVVIGAGHNGLTAACYLARANVQVTVFEASEHIGGMTATLPLIPEAPEHLVSPCAI
CCCEEEEECCCCCCCCEEEEEECCEEEEEEECCHHCCCEEEEECCCCCCHHHHHCCHHH
DAVYWQASGVGDELGLSRFGLRTVEHDPAWAWLGPNGESLVLRKDVEATIADIRRFSPAD
HEEEEECCCCCHHHCHHHHCCEEECCCCCEEEECCCCCEEEEECCHHHHHHHHHHCCCCC
AETYRQFAATAQRALAIQDLYGARHPSAPGRRVLLKAIRELRDREVRRLLGAALSTSAAD
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LISTTFTSEAVRGAFACMASILGSVIADSSGIGILATAPLHTYGVLRPIGGMQAIPDALH
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCHHHHHHHHCCCCHHHHHHHHH
RCLTDAGGVVKVAAPVTTILVERGAAVGVVLADGTTVRADHVVCAIPPQVTARLLADSDL
HHHHCCCCEEEEHHHHHHHHHHCCCEEEEEEECCCEEEECCEEEECCHHHHHHHHHCCCC
PGVESLRRAPANASGVGCLTMGLALRGQVAIPDHQAARHDSVDLREPTLFFGTLDEVESA
CCHHHHHHCCCCCCCCHHHHHHHHHCCCEECCCCHHCCCCCCCCCCCEEEEECHHHHHHH
EREARSGLTPANPPWTATILSARDPSQAPQGQDILYAYGPAPVRPHAGWQTARKSAEEAL
HHHHHCCCCCCCCCCEEEEEECCCCCCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHH
VGALSQALDGPETLEIGRFVETPEALEQRLGAPNGCIYHVDQSVTRIGPLRPALGWAGRT
HHHHHHHCCCCCHHHHCCCCCCHHHHHHHCCCCCCEEEECCCHHHHHCCCCHHHCCCCCC
PRVPGLVLSGAGSHPGGGVSGLPGQIAAQTVLRTFKP
CCCCCEEEECCCCCCCCCCCCCCHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8021167; 7721699; 10648776 [H]