| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158314751
Identifier: 158314751
GI number: 158314751
Start: 3449360
End: 3450265
Strand: Direct
Name: 158314751
Synonym: Franean1_2933
Alternate gene names: NA
Gene position: 3449360-3450265 (Clockwise)
Preceding gene: 158314749
Following gene: 158314755
Centisome position: 38.4
GC content: 70.53
Gene sequence:
>906_bases GTGACTACTTCACCGTCGTCATCGAATGGGGCCCGGTTCGATGATCTGTTCTCGGCGTTGGGGCAGCGGCGGGGGTTCCG GGAGTATCTGACCGGGTTGCTCGCCGCCCGGGATCGGAACAAGACGCTGACCTGCCTGGCCGGGGCCGAACCGGTGGTGG GAGCGGCCCATCCGGCGGTGCAGCGGCTGCAGTTCTTCCTGTCGGAATCGGTGTGGGACCCGGAGAAGATTAATACCCGG CGGGTGGAGCTGCTGCAGGCCGATCCGCAGACCGCTTCGCACCCGGACGGGGTGCTGGTGATCGACGACTCCGGGGATCG CAAGGACGGCACCGCCACCGCGCATGTGGGCCGGCAGTGGCTGGGCCGGTACGGCAAGACCGACAGCGCGGTGGTCACGG TGAGCACCCTGTGGGCGGACGAACAGATCTACTATCCGCTGCACGCCCAGCCCTACACCCCGGCCCACCATTTCCCGCAG GGGAAAAGCGACCCGGGTTTCCGGACCAAACCGCAGATCGCCATCGACCTGGCCCGGCGCGCCCGCCGGGCCGGGGTGGC GTTTCGGGCGGTGGTGGCGGACTGCGCCTACGGCGACCACGACGGGTTCCGCGCCGAGCTGACCAGGGCGGGGCTGGGGT TCGTCATGGCACTCAAACCACACCGGGGTACCTGGGCCTACGGCCCGGACGCGCACACCCCGGTGGATGCCGCCCGCGAG CTGGCCTGGCATGGTCCACACAAGCCTGGCGACTGGACGGCGGTGACCCGGACCTTCCGTGACGGGCACACCGCCCGCTG GTGGGCAGCCGAAGCACGCCTGGGCTGGTGGGGACCGGACGGGAGCACCCGGCTGGTGGTGGCGACCACCGACCCGGACC GGCTCCCGGACACCAGCACCTGCTAG
Upstream 100 bases:
>100_bases GGCCGCGACCCCCGAGCAATATGACGTTCAGGACACCGTCGGGTAGGCCGGCTTCACGGAAGATCTCCTCTAGTTTCAGA GCGCTCAGCGGCGTCTGGCG
Downstream 100 bases:
>100_bases TAGGCTGTCGCCGCTAATGTGTGGGGTATAGGCGGCGGAGTTTGGTGCGGGCGTCATCGGTGGTGAAGTGCCAGTTGACT TGACGCTGGTCGGCGTTGAC
Product: transposase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 301; Mature: 300
Protein sequence:
>301_residues MTTSPSSSNGARFDDLFSALGQRRGFREYLTGLLAARDRNKTLTCLAGAEPVVGAAHPAVQRLQFFLSESVWDPEKINTR RVELLQADPQTASHPDGVLVIDDSGDRKDGTATAHVGRQWLGRYGKTDSAVVTVSTLWADEQIYYPLHAQPYTPAHHFPQ GKSDPGFRTKPQIAIDLARRARRAGVAFRAVVADCAYGDHDGFRAELTRAGLGFVMALKPHRGTWAYGPDAHTPVDAARE LAWHGPHKPGDWTAVTRTFRDGHTARWWAAEARLGWWGPDGSTRLVVATTDPDRLPDTSTC
Sequences:
>Translated_301_residues MTTSPSSSNGARFDDLFSALGQRRGFREYLTGLLAARDRNKTLTCLAGAEPVVGAAHPAVQRLQFFLSESVWDPEKINTR RVELLQADPQTASHPDGVLVIDDSGDRKDGTATAHVGRQWLGRYGKTDSAVVTVSTLWADEQIYYPLHAQPYTPAHHFPQ GKSDPGFRTKPQIAIDLARRARRAGVAFRAVVADCAYGDHDGFRAELTRAGLGFVMALKPHRGTWAYGPDAHTPVDAARE LAWHGPHKPGDWTAVTRTFRDGHTARWWAAEARLGWWGPDGSTRLVVATTDPDRLPDTSTC >Mature_300_residues TTSPSSSNGARFDDLFSALGQRRGFREYLTGLLAARDRNKTLTCLAGAEPVVGAAHPAVQRLQFFLSESVWDPEKINTRR VELLQADPQTASHPDGVLVIDDSGDRKDGTATAHVGRQWLGRYGKTDSAVVTVSTLWADEQIYYPLHAQPYTPAHHFPQG KSDPGFRTKPQIAIDLARRARRAGVAFRAVVADCAYGDHDGFRAELTRAGLGFVMALKPHRGTWAYGPDAHTPVDAAREL AWHGPHKPGDWTAVTRTFRDGHTARWWAAEARLGWWGPDGSTRLVVATTDPDRLPDTSTC
Specific function: Involved in the transposition of the insertion sequence [H]
COG id: COG5659
COG function: function code L; FOG: Transposase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012337 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33075; Mature: 32944
Theoretical pI: Translated: 8.49; Mature: 8.49
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 0.3 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTSPSSSNGARFDDLFSALGQRRGFREYLTGLLAARDRNKTLTCLAGAEPVVGAAHPAV CCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCHHH QRLQFFLSESVWDPEKINTRRVELLQADPQTASHPDGVLVIDDSGDRKDGTATAHVGRQW HHHHHHHHHCCCCCHHCCCCEEEEEECCCCCCCCCCCEEEEECCCCCCCCCHHHHHHHHH LGRYGKTDSAVVTVSTLWADEQIYYPLHAQPYTPAHHFPQGKSDPGFRTKPQIAIDLARR HHHCCCCCCEEEEEEEEECCCEEEEECCCCCCCCHHCCCCCCCCCCCCCCCHHHHHHHHH ARRAGVAFRAVVADCAYGDHDGFRAELTRAGLGFVMALKPHRGTWAYGPDAHTPVDAARE HHHHCHHHHHHHHHHCCCCCCCHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCHHHHHHH LAWHGPHKPGDWTAVTRTFRDGHTARWWAAEARLGWWGPDGSTRLVVATTDPDRLPDTST HHHCCCCCCCCHHHHHHHHCCCCCEEEEEECCCCEEECCCCCCEEEEEECCCCCCCCCCC C C >Mature Secondary Structure TTSPSSSNGARFDDLFSALGQRRGFREYLTGLLAARDRNKTLTCLAGAEPVVGAAHPAV CCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCHHH QRLQFFLSESVWDPEKINTRRVELLQADPQTASHPDGVLVIDDSGDRKDGTATAHVGRQW HHHHHHHHHCCCCCHHCCCCEEEEEECCCCCCCCCCCEEEEECCCCCCCCCHHHHHHHHH LGRYGKTDSAVVTVSTLWADEQIYYPLHAQPYTPAHHFPQGKSDPGFRTKPQIAIDLARR HHHCCCCCCEEEEEEEEECCCEEEEECCCCCCCCHHCCCCCCCCCCCCCCCHHHHHHHHH ARRAGVAFRAVVADCAYGDHDGFRAELTRAGLGFVMALKPHRGTWAYGPDAHTPVDAARE HHHHCHHHHHHHHHHCCCCCCCHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCHHHHHHH LAWHGPHKPGDWTAVTRTFRDGHTARWWAAEARLGWWGPDGSTRLVVATTDPDRLPDTST HHHCCCCCCCCHHHHHHHHCCCCCEEEEEECCCCEEECCCCCCEEEEEECCCCCCCCCCC C C
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 1662761 [H]