| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158314636
Identifier: 158314636
GI number: 158314636
Start: 3331236
End: 3333365
Strand: Direct
Name: 158314636
Synonym: Franean1_2815
Alternate gene names: NA
Gene position: 3331236-3333365 (Clockwise)
Preceding gene: 158314635
Following gene: 158314637
Centisome position: 37.09
GC content: 72.25
Gene sequence:
>2130_bases ATGACCACCGCGGCGCACCCGCAGGCGCACCCCCAGGATGCCGTCGGCTGGCCGGACGACGACACGATCGTGCTGGCCGG CCGGCCAGTGCGCCCCAGCACCGACGAGACGCTGCTGTCCCGGTTCGGTGACCTGGTCTGGCAGCTGAGCCCGGCACATC CCGACGCCCACATCACCGTCGCCGCGCTGGACTGGCGGCGCTACCCGCCCCAGCTCGTCCGGCCGTTCAAGACGTTCTTC CACACCGCACTGGAGCAGCCCTACCCGGCGTCGCCGAACGTGCAGCGGCCCGGCGAGCGGCCCAGCGTCGCCACGCTCAG CTACTGGTTCGTCGACCTGCTCGTCTTCGCCACCTGGCTCGACGAACGCGCCGTCGGCCACCTCAGCGACATCACCACCG CCGACCTAGACGCCTACCGGTCCCACGTCCTCGGGCTGGGCCGAAGCCCCGCCCGCGAGACGGACCTCCTCGCCGCCGTC CGCACCCTGTGGATCTACCGTGACCGTCTTCCGGCGGCGTGCCGGCTTCGGGTCTGCCCGTGGGGCGGCCTGGCGGCCAA GGACCTGGTCCGCCTCCCACCCGCCGGCCGGGAGAACGCCACCCCCCGGATCGCCTCCGCGACGATGGACGCCCTGCTCG CCTGGGCGCTACGCATGGTCGAAACCCTCGGCCCGGACATCCGCGACGCCTGGCACGAGTTCCACGACCTCGACGCGGGC AACCACCCCTCCCAGCAGATCTACCAGGGGATGGGCATCCCCGACCGCCTGCACCTGTTCCTCCACCACGCCAGCAGACG CGGAACCTTGCTGCCCGGACGGCACGACCCCGCCCGCGGCACCGCCGTCAACGGCAGTCACATCCTGCGCCTGGTCGGGG TCCCCCCGGACAAGCGCGCCGGGCTGCCCTCACGGCAGCGGGCGCTGCTGGAGAACGCGGGCGTACCGATCAGCACCGAC ACCACCGTCGGCAGGATCACCGCACGCCTCGACGGCATCCCCTGGCGGCCCGGCCCGATCAGCATCCGCGAGCTCCCCAC CCTGGTGCGGCTGCTCTATGCTTCCGCCTTCACCGTCATCTGCTATCTATCGGGCATGCGCCCCGGCGAGGTCCTCACCC TGCCCCACGGCTGCGCCGGCAGCGACCCCCGCACCGACGAGCTGCTGCTGCACGGCCGGCGGGGCAAGGGCTACGACCGA AGCCCCCTGACCCCCGGGCAGGTCGAACCCGACCGACCCTGGGTAGTCGTCGCCCCGGTCCACACCGCCGTGCGGATGCT GGAAAGCCTCGCCGACTTCCCGTTCCTGTTCCCCGCCAGCCCGATCGCCGCCCACGCCGGCCGGGCCAACACCACCCACG CCCGCTCCACCGCCGCGATCAACCAGGACCTGGAAGACCTCGTCACCTGGGTCAACACGACCTTCACCCGCCCGGACGGC ACCCCGCCCATTCCACCCGACCCGACCAAGCACCTCCACGCCACCCGCTTCCGGCGCACCCTCGCCCACAGCATCGTCCG CCGTCCCCGCGGCCTCATCGCCGCCGCCCTGCAATACGGACACGTCCGCGCCAAGGTCACCCTGAGCTACGCGGGCGCCG CGGACACCTCCTGGCTCGATGACCTGGCGGTCGAGCGCCTGGAGATGGTCATGGAACAGACGCAGACCGATGCCCGGCTC CTCGCCGACGGCGAGCACGTCAGCGGACCCGCCGCCACCGACTACCGCACCCGGATCGCTCGGTTCCACGGCCGAGTCGT CAACCAGCCCCACAACGCCCGACGGCTCCTCGCCAGCACGGACCCAGACATCCACCACGGCGACGGCCTCACCTGCGTCT ACCGCGCCGAGACCGCCGAATGCCGCCGCATCCTCGCCCGACAGGGGATCACCGTCGACGGGCCGCAAGAGTCCCACTGC CGGTCGACCTGCCGCAACCTCGCCTACACCGACCGCAGCATTGACCAGCTGCGCTCCCGGCTCGATCTCCTGGTCGCCAC CACCGGCGACTCCCTGACGCCCCAGCCGCTCCGCGACCGAGCGCACGCACAGGCCCAGGCCGCCAGAGCCACCATCGACC GGCACGTCTCATCCTCCCCACATCGGGCAGACCAGGCAGGCCAGCGATGA
Upstream 100 bases:
>100_bases ACCACTACACTGCGGCCGAACGCGACCACGCCCGCGCCACCGTGACCGCCCGCCAGCAGCAGCTCGTAGACGACCTGCTC GACGGCCGATGGGACCTGCG
Downstream 100 bases:
>100_bases CCCGCCAGCCCCGGAATCTGCCAGCGGAGAGGTCCGCCATCGAGGCCGCGACCACGCGGCTGCTCGCCGGAACCCCACTG CGATCCCGCTCCGGCAAACT
Product: phage integrase family protein
Products: NA
Alternate protein names: Phage Integrase Family Domain-Containing Protein; Phage Integrase; Phage Integrase Family Domain Protein; Orf_Bo; Integrase Family Protein
Number of amino acids: Translated: 709; Mature: 708
Protein sequence:
>709_residues MTTAAHPQAHPQDAVGWPDDDTIVLAGRPVRPSTDETLLSRFGDLVWQLSPAHPDAHITVAALDWRRYPPQLVRPFKTFF HTALEQPYPASPNVQRPGERPSVATLSYWFVDLLVFATWLDERAVGHLSDITTADLDAYRSHVLGLGRSPARETDLLAAV RTLWIYRDRLPAACRLRVCPWGGLAAKDLVRLPPAGRENATPRIASATMDALLAWALRMVETLGPDIRDAWHEFHDLDAG NHPSQQIYQGMGIPDRLHLFLHHASRRGTLLPGRHDPARGTAVNGSHILRLVGVPPDKRAGLPSRQRALLENAGVPISTD TTVGRITARLDGIPWRPGPISIRELPTLVRLLYASAFTVICYLSGMRPGEVLTLPHGCAGSDPRTDELLLHGRRGKGYDR SPLTPGQVEPDRPWVVVAPVHTAVRMLESLADFPFLFPASPIAAHAGRANTTHARSTAAINQDLEDLVTWVNTTFTRPDG TPPIPPDPTKHLHATRFRRTLAHSIVRRPRGLIAAALQYGHVRAKVTLSYAGAADTSWLDDLAVERLEMVMEQTQTDARL LADGEHVSGPAATDYRTRIARFHGRVVNQPHNARRLLASTDPDIHHGDGLTCVYRAETAECRRILARQGITVDGPQESHC RSTCRNLAYTDRSIDQLRSRLDLLVATTGDSLTPQPLRDRAHAQAQAARATIDRHVSSSPHRADQAGQR
Sequences:
>Translated_709_residues MTTAAHPQAHPQDAVGWPDDDTIVLAGRPVRPSTDETLLSRFGDLVWQLSPAHPDAHITVAALDWRRYPPQLVRPFKTFF HTALEQPYPASPNVQRPGERPSVATLSYWFVDLLVFATWLDERAVGHLSDITTADLDAYRSHVLGLGRSPARETDLLAAV RTLWIYRDRLPAACRLRVCPWGGLAAKDLVRLPPAGRENATPRIASATMDALLAWALRMVETLGPDIRDAWHEFHDLDAG NHPSQQIYQGMGIPDRLHLFLHHASRRGTLLPGRHDPARGTAVNGSHILRLVGVPPDKRAGLPSRQRALLENAGVPISTD TTVGRITARLDGIPWRPGPISIRELPTLVRLLYASAFTVICYLSGMRPGEVLTLPHGCAGSDPRTDELLLHGRRGKGYDR SPLTPGQVEPDRPWVVVAPVHTAVRMLESLADFPFLFPASPIAAHAGRANTTHARSTAAINQDLEDLVTWVNTTFTRPDG TPPIPPDPTKHLHATRFRRTLAHSIVRRPRGLIAAALQYGHVRAKVTLSYAGAADTSWLDDLAVERLEMVMEQTQTDARL LADGEHVSGPAATDYRTRIARFHGRVVNQPHNARRLLASTDPDIHHGDGLTCVYRAETAECRRILARQGITVDGPQESHC RSTCRNLAYTDRSIDQLRSRLDLLVATTGDSLTPQPLRDRAHAQAQAARATIDRHVSSSPHRADQAGQR >Mature_708_residues TTAAHPQAHPQDAVGWPDDDTIVLAGRPVRPSTDETLLSRFGDLVWQLSPAHPDAHITVAALDWRRYPPQLVRPFKTFFH TALEQPYPASPNVQRPGERPSVATLSYWFVDLLVFATWLDERAVGHLSDITTADLDAYRSHVLGLGRSPARETDLLAAVR TLWIYRDRLPAACRLRVCPWGGLAAKDLVRLPPAGRENATPRIASATMDALLAWALRMVETLGPDIRDAWHEFHDLDAGN HPSQQIYQGMGIPDRLHLFLHHASRRGTLLPGRHDPARGTAVNGSHILRLVGVPPDKRAGLPSRQRALLENAGVPISTDT TVGRITARLDGIPWRPGPISIRELPTLVRLLYASAFTVICYLSGMRPGEVLTLPHGCAGSDPRTDELLLHGRRGKGYDRS PLTPGQVEPDRPWVVVAPVHTAVRMLESLADFPFLFPASPIAAHAGRANTTHARSTAAINQDLEDLVTWVNTTFTRPDGT PPIPPDPTKHLHATRFRRTLAHSIVRRPRGLIAAALQYGHVRAKVTLSYAGAADTSWLDDLAVERLEMVMEQTQTDARLL ADGEHVSGPAATDYRTRIARFHGRVVNQPHNARRLLASTDPDIHHGDGLTCVYRAETAECRRILARQGITVDGPQESHCR STCRNLAYTDRSIDQLRSRLDLLVATTGDSLTPQPLRDRAHAQAQAARATIDRHVSSSPHRADQAGQR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 78195; Mature: 78063
Theoretical pI: Translated: 9.02; Mature: 9.02
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTAAHPQAHPQDAVGWPDDDTIVLAGRPVRPSTDETLLSRFGDLVWQLSPAHPDAHITV CCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHEEECCCCCCCEEEE AALDWRRYPPQLVRPFKTFFHTALEQPYPASPNVQRPGERPSVATLSYWFVDLLVFATWL EEECCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH DERAVGHLSDITTADLDAYRSHVLGLGRSPARETDLLAAVRTLWIYRDRLPAACRLRVCP HHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHEEEECC WGGLAAKDLVRLPPAGRENATPRIASATMDALLAWALRMVETLGPDIRDAWHEFHDLDAG CCCCCHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCC NHPSQQIYQGMGIPDRLHLFLHHASRRGTLLPGRHDPARGTAVNGSHILRLVGVPPDKRA CCCHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCEECCCEEEEEECCCCCCCC GLPSRQRALLENAGVPISTDTTVGRITARLDGIPWRPGPISIRELPTLVRLLYASAFTVI CCCHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH CYLSGMRPGEVLTLPHGCAGSDPRTDELLLHGRRGKGYDRSPLTPGQVEPDRPWVVVAPV HHHCCCCCCCEEECCCCCCCCCCCCCHHEEECCCCCCCCCCCCCCCCCCCCCCEEEEECH HTAVRMLESLADFPFLFPASPIAAHAGRANTTHARSTAAINQDLEDLVTWVNTTFTRPDG HHHHHHHHHHHCCCEECCCCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCEECCCC TPPIPPDPTKHLHATRFRRTLAHSIVRRPRGLIAAALQYGHVRAKVTLSYAGAADTSWLD CCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCEEEEEEEEECCCCCCHHHH DLAVERLEMVMEQTQTDARLLADGEHVSGPAATDYRTRIARFHGRVVNQPHNARRLLAST HHHHHHHHHHHHHHHCCHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHCC DPDIHHGDGLTCVYRAETAECRRILARQGITVDGPQESHCRSTCRNLAYTDRSIDQLRSR CCCCCCCCCEEEEEECCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHH LDLLVATTGDSLTPQPLRDRAHAQAQAARATIDRHVSSSPHRADQAGQR HHEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHCCCC >Mature Secondary Structure TTAAHPQAHPQDAVGWPDDDTIVLAGRPVRPSTDETLLSRFGDLVWQLSPAHPDAHITV CCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHEEECCCCCCCEEEE AALDWRRYPPQLVRPFKTFFHTALEQPYPASPNVQRPGERPSVATLSYWFVDLLVFATWL EEECCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH DERAVGHLSDITTADLDAYRSHVLGLGRSPARETDLLAAVRTLWIYRDRLPAACRLRVCP HHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHEEEECC WGGLAAKDLVRLPPAGRENATPRIASATMDALLAWALRMVETLGPDIRDAWHEFHDLDAG CCCCCHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCC NHPSQQIYQGMGIPDRLHLFLHHASRRGTLLPGRHDPARGTAVNGSHILRLVGVPPDKRA CCCHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCEECCCEEEEEECCCCCCCC GLPSRQRALLENAGVPISTDTTVGRITARLDGIPWRPGPISIRELPTLVRLLYASAFTVI CCCHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH CYLSGMRPGEVLTLPHGCAGSDPRTDELLLHGRRGKGYDRSPLTPGQVEPDRPWVVVAPV HHHCCCCCCCEEECCCCCCCCCCCCCHHEEECCCCCCCCCCCCCCCCCCCCCCEEEEECH HTAVRMLESLADFPFLFPASPIAAHAGRANTTHARSTAAINQDLEDLVTWVNTTFTRPDG HHHHHHHHHHHCCCEECCCCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCEECCCC TPPIPPDPTKHLHATRFRRTLAHSIVRRPRGLIAAALQYGHVRAKVTLSYAGAADTSWLD CCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCEEEEEEEEECCCCCCHHHH DLAVERLEMVMEQTQTDARLLADGEHVSGPAATDYRTRIARFHGRVVNQPHNARRLLAST HHHHHHHHHHHHHHHCCHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHCC DPDIHHGDGLTCVYRAETAECRRILARQGITVDGPQESHCRSTCRNLAYTDRSIDQLRSR CCCCCCCCCEEEEEECCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHH LDLLVATTGDSLTPQPLRDRAHAQAQAARATIDRHVSSSPHRADQAGQR HHEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA