Definition Frankia sp. EAN1pec chromosome, complete genome.
Accession NC_009921
Length 8,982,042

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The map label for this gene is 158314634

Identifier: 158314634

GI number: 158314634

Start: 3327822

End: 3329387

Strand: Direct

Name: 158314634

Synonym: Franean1_2813

Alternate gene names: NA

Gene position: 3327822-3329387 (Clockwise)

Preceding gene: 158314632

Following gene: 158314635

Centisome position: 37.05

GC content: 68.07

Gene sequence:

>1566_bases
ATGGAGAACAGCGCGTCCTGGATAGTTGAATTCTATGACCTTTCAGTCAATCTTCCTCAGGTTGAGGTTGAGGGGATCGC
CGGGCTGGGTGATGTGCACGAGCGGGCGGTGCGTAACGGCGCGCGGCACGGCACGCCACTGATTATGAAAACGTCGGGTA
TGGTCGATTCCCGGGTTAACCTGTTCTTCCGCACCGGCCCCATGGCCGCGGCGCGACCATCGACGTGGCGGCGTTACGCG
TACTCGCTGGTGGTCTGGCTGAACTTCCTGGAGGTGTTCGGGCGGCGCTGGGATGCGGCGACTGCGGGCGATGTGGAGGC
GTTCAAGGACTGGCGGGTGACCGACCGGTCGAACGACGGCAGGGTCGCACCGGCGAGTTTCGAGGCTGACAGGGCGGCGC
TGAACTGCTTCTACTCGTGGGCGGCGGTGCGCTACGGCGTGGTCAACCCGGTTCCCTCCGGCCGCTGGGTGCGTGCTGGA
CGGCCAGGTGACGACGTCGATGGCCGGCGTGGGTCTCGGGACCCGCTGCGCCCGGCGGGGGCGAGACGGCGGCAGGTGAA
GTGGCTGTTGCGGACGGCGTTCGAGCAGTGGCGGGACATCGGCCTGCGCGGCTACGGCTTCGACGGCGTCCGGCGCCCGG
ACTGGTGCGGCCCGTATGAGGACCGGGATGCCGCGTTCGTCGACGGCCTGTACGGGACGGGGCTGCGGCTGACCGAATGG
GCGAGCATCCTCGACGTCGAGCTACCGGGCGAGGGTAACGATCGTTTTCTCCGGGCGTGGCTGGCGGCGGCGTGCGCGAA
GGGCGGCCGGCACGGGCGGGTCTACCGGATACCGCGTCGGGTGCTGACGGCGGTGCGCGGCTATCTGGACCCTCAGGAGG
GTTCACGGGGCGAGAGGGTCCGCTGGGCACAGCGAGCCGGCCGCTACGAACAGCTGACCGTCCGGAGGATCGTCACCGGC
TACAACCCCCGCTCCCGCATCCTCACCTTGGAGGGCACGGCCGGGCCGGTCCGGATGTCGGTGGACGTGCTGGGCCCGCA
CGAGCGCCGCCACTTGTTCCGCCGGACTGACAACGGTCTGGAGCCGCTGGCTGTGTGGCTGGGACGCGATGGGCTGCCGA
AACATCCGCATGGCTGGGAGGACACGTTCACCGCCGCAAACCGTCGCGTTACAGGGGCGTGGATGGCCGCGGGCCGGGCG
GGCAGCGCGCCATTGTGGTGCACGCCGCATATGTGTCGGCACAGCTTCGCGCTGAAATGGTTCTCGATCCTGTCGATCGT
GTGGGACAACCGGCTGACGGGTTTCACTGCCGAGGAGCTGAAGGACTATCGCGCCCAGTTCGGTGATATCTGGTATCAGC
TTGCCGGTCTGCTCGGGCACGCCGATCCGTCGACGACCCGTGATCATTATCTGGAACCGTTCACCCGTTTGGACGTCGAC
TATCTGATGGCGCTGCTGGACGGCGAGGAACAGACGGCCGTCGACACGCTGCTGCGCGCGGTGGCCGCTGACAGCGGACA
CGTGCTCACGGGGACGGACCTGAGCGGCACGGGGAGCGCCGGGTGA

Upstream 100 bases:

>100_bases
CCCGGCGGAGCGCGGCGGCAACGTCCTCTCCGTTTTCGACTTTGCCTGAGGTTCTCTAGGCTTCGCTCCGTTGTCGGTTC
GAGAGCCCCGGGAGATCGTG

Downstream 100 bases:

>100_bases
GCGGTATGGCGGGTGGCCCCGGCGTGCAACGCAGCCGGTTGCGAGCTGGCGGCCACCGCAGCGGCTGGAGGCGGACGGGG
ACGGCCTGCGGGTGCGGTTC

Product: integrase domain-containing protein

Products: NA

Alternate protein names: Phage Integrase-Like SAM-Like; Phage Integrase Domain/SAM Domain-Containing Protein; Integrase Domain Protein SAM Domain Protein; Site-Specific Recombinase XerD; Phage Integrase Family Domain-Containing Protein; Phage Integrase Family Protein; Phage Integrase Family Domain Protein; Phage Type Integrase/Recombinase; Orf_Bo

Number of amino acids: Translated: 521; Mature: 521

Protein sequence:

>521_residues
MENSASWIVEFYDLSVNLPQVEVEGIAGLGDVHERAVRNGARHGTPLIMKTSGMVDSRVNLFFRTGPMAAARPSTWRRYA
YSLVVWLNFLEVFGRRWDAATAGDVEAFKDWRVTDRSNDGRVAPASFEADRAALNCFYSWAAVRYGVVNPVPSGRWVRAG
RPGDDVDGRRGSRDPLRPAGARRRQVKWLLRTAFEQWRDIGLRGYGFDGVRRPDWCGPYEDRDAAFVDGLYGTGLRLTEW
ASILDVELPGEGNDRFLRAWLAAACAKGGRHGRVYRIPRRVLTAVRGYLDPQEGSRGERVRWAQRAGRYEQLTVRRIVTG
YNPRSRILTLEGTAGPVRMSVDVLGPHERRHLFRRTDNGLEPLAVWLGRDGLPKHPHGWEDTFTAANRRVTGAWMAAGRA
GSAPLWCTPHMCRHSFALKWFSILSIVWDNRLTGFTAEELKDYRAQFGDIWYQLAGLLGHADPSTTRDHYLEPFTRLDVD
YLMALLDGEEQTAVDTLLRAVAADSGHVLTGTDLSGTGSAG

Sequences:

>Translated_521_residues
MENSASWIVEFYDLSVNLPQVEVEGIAGLGDVHERAVRNGARHGTPLIMKTSGMVDSRVNLFFRTGPMAAARPSTWRRYA
YSLVVWLNFLEVFGRRWDAATAGDVEAFKDWRVTDRSNDGRVAPASFEADRAALNCFYSWAAVRYGVVNPVPSGRWVRAG
RPGDDVDGRRGSRDPLRPAGARRRQVKWLLRTAFEQWRDIGLRGYGFDGVRRPDWCGPYEDRDAAFVDGLYGTGLRLTEW
ASILDVELPGEGNDRFLRAWLAAACAKGGRHGRVYRIPRRVLTAVRGYLDPQEGSRGERVRWAQRAGRYEQLTVRRIVTG
YNPRSRILTLEGTAGPVRMSVDVLGPHERRHLFRRTDNGLEPLAVWLGRDGLPKHPHGWEDTFTAANRRVTGAWMAAGRA
GSAPLWCTPHMCRHSFALKWFSILSIVWDNRLTGFTAEELKDYRAQFGDIWYQLAGLLGHADPSTTRDHYLEPFTRLDVD
YLMALLDGEEQTAVDTLLRAVAADSGHVLTGTDLSGTGSAG
>Mature_521_residues
MENSASWIVEFYDLSVNLPQVEVEGIAGLGDVHERAVRNGARHGTPLIMKTSGMVDSRVNLFFRTGPMAAARPSTWRRYA
YSLVVWLNFLEVFGRRWDAATAGDVEAFKDWRVTDRSNDGRVAPASFEADRAALNCFYSWAAVRYGVVNPVPSGRWVRAG
RPGDDVDGRRGSRDPLRPAGARRRQVKWLLRTAFEQWRDIGLRGYGFDGVRRPDWCGPYEDRDAAFVDGLYGTGLRLTEW
ASILDVELPGEGNDRFLRAWLAAACAKGGRHGRVYRIPRRVLTAVRGYLDPQEGSRGERVRWAQRAGRYEQLTVRRIVTG
YNPRSRILTLEGTAGPVRMSVDVLGPHERRHLFRRTDNGLEPLAVWLGRDGLPKHPHGWEDTFTAANRRVTGAWMAAGRA
GSAPLWCTPHMCRHSFALKWFSILSIVWDNRLTGFTAEELKDYRAQFGDIWYQLAGLLGHADPSTTRDHYLEPFTRLDVD
YLMALLDGEEQTAVDTLLRAVAADSGHVLTGTDLSGTGSAG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 58445; Mature: 58445

Theoretical pI: Translated: 9.50; Mature: 9.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MENSASWIVEFYDLSVNLPQVEVEGIAGLGDVHERAVRNGARHGTPLIMKTSGMVDSRVN
CCCCCEEEEEEEEEECCCCCEEECCCCCCHHHHHHHHHCCCCCCCCEEEEECCCCCCCEE
LFFRTGPMAAARPSTWRRYAYSLVVWLNFLEVFGRRWDAATAGDVEAFKDWRVTDRSNDG
EEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHCCCCCCCCCCC
RVAPASFEADRAALNCFYSWAAVRYGVVNPVPSGRWVRAGRPGDDVDGRRGSRDPLRPAG
CCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCC
ARRRQVKWLLRTAFEQWRDIGLRGYGFDGVRRPDWCGPYEDRDAAFVDGLYGTGLRLTEW
HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCHHCCCCCHHHH
ASILDVELPGEGNDRFLRAWLAAACAKGGRHGRVYRIPRRVLTAVRGYLDPQEGSRGERV
HHEEEEECCCCCCHHHHHHHHHHHHHCCCCCCCEEECHHHHHHHHHHCCCCCCCCCCCHH
RWAQRAGRYEQLTVRRIVTGYNPRSRILTLEGTAGPVRMSVDVLGPHERRHLFRRTDNGL
HHHHHCCCHHHHHHHHHHHCCCCCCEEEEEECCCCCEEEEEEECCCHHHHHHHHHCCCCC
EPLAVWLGRDGLPKHPHGWEDTFTAANRRVTGAWMAAGRAGSAPLWCTPHMCRHSFALKW
CHHHHHHCCCCCCCCCCCCCHHHHHCCCEECCHHHCCCCCCCCCEEECHHHHHHHHHHHH
FSILSIVWDNRLTGFTAEELKDYRAQFGDIWYQLAGLLGHADPSTTRDHYLEPFTRLDVD
HHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHCCHHHHCHH
YLMALLDGEEQTAVDTLLRAVAADSGHVLTGTDLSGTGSAG
HHHHHHCCCHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCC
>Mature Secondary Structure
MENSASWIVEFYDLSVNLPQVEVEGIAGLGDVHERAVRNGARHGTPLIMKTSGMVDSRVN
CCCCCEEEEEEEEEECCCCCEEECCCCCCHHHHHHHHHCCCCCCCCEEEEECCCCCCCEE
LFFRTGPMAAARPSTWRRYAYSLVVWLNFLEVFGRRWDAATAGDVEAFKDWRVTDRSNDG
EEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHCCCCCCCCCCC
RVAPASFEADRAALNCFYSWAAVRYGVVNPVPSGRWVRAGRPGDDVDGRRGSRDPLRPAG
CCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCC
ARRRQVKWLLRTAFEQWRDIGLRGYGFDGVRRPDWCGPYEDRDAAFVDGLYGTGLRLTEW
HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCHHCCCCCHHHH
ASILDVELPGEGNDRFLRAWLAAACAKGGRHGRVYRIPRRVLTAVRGYLDPQEGSRGERV
HHEEEEECCCCCCHHHHHHHHHHHHHCCCCCCCEEECHHHHHHHHHHCCCCCCCCCCCHH
RWAQRAGRYEQLTVRRIVTGYNPRSRILTLEGTAGPVRMSVDVLGPHERRHLFRRTDNGL
HHHHHCCCHHHHHHHHHHHCCCCCCEEEEEECCCCCEEEEEEECCCHHHHHHHHHCCCCC
EPLAVWLGRDGLPKHPHGWEDTFTAANRRVTGAWMAAGRAGSAPLWCTPHMCRHSFALKW
CHHHHHHCCCCCCCCCCCCCHHHHHCCCEECCHHHCCCCCCCCCEEECHHHHHHHHHHHH
FSILSIVWDNRLTGFTAEELKDYRAQFGDIWYQLAGLLGHADPSTTRDHYLEPFTRLDVD
HHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHCCHHHHCHH
YLMALLDGEEQTAVDTLLRAVAADSGHVLTGTDLSGTGSAG
HHHHHHCCCHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA