| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158314623
Identifier: 158314623
GI number: 158314623
Start: 3316962
End: 3318575
Strand: Direct
Name: 158314623
Synonym: Franean1_2802
Alternate gene names: NA
Gene position: 3316962-3318575 (Clockwise)
Preceding gene: 158314622
Following gene: 158314624
Centisome position: 36.93
GC content: 67.91
Gene sequence:
>1614_bases ATGAACAAGCCCAGCCAAAGGGTTGAGCAGGACGAGTTGCGGACTCGGATGCGCGCGACCGGCATGAGCCACCACGAGAT CGCGATCGAGTTCGCCCGCCGCTACCGGCTACGCCCCCGCGCTGCCTACCGTGTCGCCCACGGCTGGACACAGCAGCAGG CCGCCGACCGCATCAACGCCCACGCCGTCCGTGCCGGCCTCGACCCGGACGGCACCGCCCCGATGACCGCGCCGCGGCTA TCGGAGGTGGAGAACTGGCCTCGCCCTGCCCGGCGACGTCCCACCCCGCAGATCCTCGCCCTGCTTGCCGAGGTGTACGG ATGCGATCTCCACGCCCTCGTCGACGTGGACGATCGCGAACACCTCCCTCCGGCAGACGTGTTCCTGATCAACGGCATGC GCCGGCTGCCGGACGGCGTGGCTGCGTCATCGACGGCCTCTCCGATCACACTCGCGGGGAAACGATGGGGAACGACCACC GAACGACCGGTTGACGTCGCCTTCGGCGCCGCCAGAGCTGGGCAAGCACCGGCCCCCAACTCGGTCGGTCTCGCAGACAA AGACAACGTGATCATTTTTCCGCAACTCGCCCCGGATGGGAGGATCGTCCTCATGCCACTCGATCGCCGGGGTTTCCTGA GCGGCCTGGGCCTCACCGCCGCCAGCAGCGCAGCCCTCAGCCCGCTCGCCACGATGCCACCAGGATCGTCCTCCATCGAC CCACGTGTCGTCGATCACTTCGCACGCCTGCGGGCCGTGCTCGCGGAGAACGACAACCTCTTCGGGCCGCGCCAGGTCAT CACCACAGCGCAGGAACAGGCCGGCCTCATCGCCGCCCATCTCCGCCACGGCACGAGTTCGCGTCCACAACGGCAGACCC TGCTCCACATCCAAACGCAGTTCGCTGATCTCCTCGGCTGGCTCCATCAAGACAGCGGCGATAACGCCACCGCTGGATAC TGGCTCGACCGAGCGCTGGAATGGTCACACCGAGCGAGCGACCCCAACGCCACCGTGTTCATCCTTGCCCGCAAAAGCCA ACTCGCCGCAGACCGTGGCGACCCAGCTGAAGCCGTCGACGTCGCCGACGCAGCCCTGACCAGCGCGGAGCCAACCGGTC GTCTCGCCGCCATCGCCGCGACCTACAGCGCGCATGGCCACGCACTACGCGGCGAGAAAACCACCTGCCTGACGCTCTAC GACCGCGCCCACGACATCCTCGACCAGGCCGGACCCGACACCGACCCCTGGGGCGAGTTCTTCAGCCCTGCCTACATCGA AGTCCAGCGGGCACACAGCCTCGCCGCACTCGGTGACTACCCTGCTGCAGCCACCGGGTTCCGGACCGCGATCGACGGTC TCCCCTCGGCTTTCCACCGCGACCGCGGTGTCTACCTCGCCCGCGAAGCCCTCGCACACGCAGGAGCACGCGAACCAGAG CAAGCCGCGACACTCGGTCTCAACGCACTCACGGTCGGCGCCAGCACGCACTCCGGATGCATCATGACCAGTCTGCGGTC CCTGCGTGACGCCGTCGCCGGATGGCAAACTGTCTCCCAGGTACGCGAGTTCCGCCAGGCGATGGACCAGGTCCCCACGG CCATCACCGTCTGA
Upstream 100 bases:
>100_bases GGACCGGTTACTGTGGGCGGGTTCCGATCGGGAAGTGATCGGTGGCGGTAGCTGCCGGATCAGTGGGCATCCTTGACCTG GAAGGGGTGGCAACGTCGCC
Downstream 100 bases:
>100_bases CTACCATCCCGCCACCGGCTATCCGGTCCGCCACCACCAGGGACCGGCCCAGGGAAGGACGAGCCGCTCCATGCCCCAGC TCGACGACCACCATTGGATG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 537; Mature: 537
Protein sequence:
>537_residues MNKPSQRVEQDELRTRMRATGMSHHEIAIEFARRYRLRPRAAYRVAHGWTQQQAADRINAHAVRAGLDPDGTAPMTAPRL SEVENWPRPARRRPTPQILALLAEVYGCDLHALVDVDDREHLPPADVFLINGMRRLPDGVAASSTASPITLAGKRWGTTT ERPVDVAFGAARAGQAPAPNSVGLADKDNVIIFPQLAPDGRIVLMPLDRRGFLSGLGLTAASSAALSPLATMPPGSSSID PRVVDHFARLRAVLAENDNLFGPRQVITTAQEQAGLIAAHLRHGTSSRPQRQTLLHIQTQFADLLGWLHQDSGDNATAGY WLDRALEWSHRASDPNATVFILARKSQLAADRGDPAEAVDVADAALTSAEPTGRLAAIAATYSAHGHALRGEKTTCLTLY DRAHDILDQAGPDTDPWGEFFSPAYIEVQRAHSLAALGDYPAAATGFRTAIDGLPSAFHRDRGVYLAREALAHAGAREPE QAATLGLNALTVGASTHSGCIMTSLRSLRDAVAGWQTVSQVREFRQAMDQVPTAITV
Sequences:
>Translated_537_residues MNKPSQRVEQDELRTRMRATGMSHHEIAIEFARRYRLRPRAAYRVAHGWTQQQAADRINAHAVRAGLDPDGTAPMTAPRL SEVENWPRPARRRPTPQILALLAEVYGCDLHALVDVDDREHLPPADVFLINGMRRLPDGVAASSTASPITLAGKRWGTTT ERPVDVAFGAARAGQAPAPNSVGLADKDNVIIFPQLAPDGRIVLMPLDRRGFLSGLGLTAASSAALSPLATMPPGSSSID PRVVDHFARLRAVLAENDNLFGPRQVITTAQEQAGLIAAHLRHGTSSRPQRQTLLHIQTQFADLLGWLHQDSGDNATAGY WLDRALEWSHRASDPNATVFILARKSQLAADRGDPAEAVDVADAALTSAEPTGRLAAIAATYSAHGHALRGEKTTCLTLY DRAHDILDQAGPDTDPWGEFFSPAYIEVQRAHSLAALGDYPAAATGFRTAIDGLPSAFHRDRGVYLAREALAHAGAREPE QAATLGLNALTVGASTHSGCIMTSLRSLRDAVAGWQTVSQVREFRQAMDQVPTAITV >Mature_537_residues MNKPSQRVEQDELRTRMRATGMSHHEIAIEFARRYRLRPRAAYRVAHGWTQQQAADRINAHAVRAGLDPDGTAPMTAPRL SEVENWPRPARRRPTPQILALLAEVYGCDLHALVDVDDREHLPPADVFLINGMRRLPDGVAASSTASPITLAGKRWGTTT ERPVDVAFGAARAGQAPAPNSVGLADKDNVIIFPQLAPDGRIVLMPLDRRGFLSGLGLTAASSAALSPLATMPPGSSSID PRVVDHFARLRAVLAENDNLFGPRQVITTAQEQAGLIAAHLRHGTSSRPQRQTLLHIQTQFADLLGWLHQDSGDNATAGY WLDRALEWSHRASDPNATVFILARKSQLAADRGDPAEAVDVADAALTSAEPTGRLAAIAATYSAHGHALRGEKTTCLTLY DRAHDILDQAGPDTDPWGEFFSPAYIEVQRAHSLAALGDYPAAATGFRTAIDGLPSAFHRDRGVYLAREALAHAGAREPE QAATLGLNALTVGASTHSGCIMTSLRSLRDAVAGWQTVSQVREFRQAMDQVPTAITV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 57909; Mature: 57909
Theoretical pI: Translated: 7.20; Mature: 7.20
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNKPSQRVEQDELRTRMRATGMSHHEIAIEFARRYRLRPRAAYRVAHGWTQQQAADRINA CCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHHHHHCCHHHHHHHHHHH HAVRAGLDPDGTAPMTAPRLSEVENWPRPARRRPTPQILALLAEVYGCDLHALVDVDDRE HHHCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCEEEEEECCCCC HLPPADVFLINGMRRLPDGVAASSTASPITLAGKRWGTTTERPVDVAFGAARAGQAPAPN CCCCHHEEEECCHHHCCCCCCCCCCCCCEEECCCCCCCCCCCCCHHHHCCCCCCCCCCCC SVGLADKDNVIIFPQLAPDGRIVLMPLDRRGFLSGLGLTAASSAALSPLATMPPGSSSID CCCCCCCCCEEEEEEECCCCEEEEEECCCCCHHHHCCHHHHCHHHCCCCCCCCCCCCCCC PRVVDHFARLRAVLAENDNLFGPRQVITTAQEQAGLIAAHLRHGTSSRPQRQTLLHIQTQ HHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH FADLLGWLHQDSGDNATAGYWLDRALEWSHRASDPNATVFILARKSQLAADRGDPAEAVD HHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCCEEEEEEECHHHHCCCCCCHHHHH VADAALTSAEPTGRLAAIAATYSAHGHALRGEKTTCLTLYDRAHDILDQAGPDTDPWGEF HHHHHHCCCCCCCCEEEEEEECCCCCCEECCCCCEEEEEHHHHHHHHHHCCCCCCCHHHH FSPAYIEVQRAHSLAALGDYPAAATGFRTAIDGLPSAFHRDRGVYLAREALAHAGAREPE CCCHHEEHHHHHHHHHHCCCCCHHHHHHHHHHHCHHHHHCCCCHHHHHHHHHHCCCCCCH QAATLGLNALTVGASTHSGCIMTSLRSLRDAVAGWQTVSQVREFRQAMDQVPTAITV HHHHHCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECC >Mature Secondary Structure MNKPSQRVEQDELRTRMRATGMSHHEIAIEFARRYRLRPRAAYRVAHGWTQQQAADRINA CCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHHHHHCCHHHHHHHHHHH HAVRAGLDPDGTAPMTAPRLSEVENWPRPARRRPTPQILALLAEVYGCDLHALVDVDDRE HHHCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCEEEEEECCCCC HLPPADVFLINGMRRLPDGVAASSTASPITLAGKRWGTTTERPVDVAFGAARAGQAPAPN CCCCHHEEEECCHHHCCCCCCCCCCCCCEEECCCCCCCCCCCCCHHHHCCCCCCCCCCCC SVGLADKDNVIIFPQLAPDGRIVLMPLDRRGFLSGLGLTAASSAALSPLATMPPGSSSID CCCCCCCCCEEEEEEECCCCEEEEEECCCCCHHHHCCHHHHCHHHCCCCCCCCCCCCCCC PRVVDHFARLRAVLAENDNLFGPRQVITTAQEQAGLIAAHLRHGTSSRPQRQTLLHIQTQ HHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH FADLLGWLHQDSGDNATAGYWLDRALEWSHRASDPNATVFILARKSQLAADRGDPAEAVD HHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCCEEEEEEECHHHHCCCCCCHHHHH VADAALTSAEPTGRLAAIAATYSAHGHALRGEKTTCLTLYDRAHDILDQAGPDTDPWGEF HHHHHHCCCCCCCCEEEEEEECCCCCCEECCCCCEEEEEHHHHHHHHHHCCCCCCCHHHH FSPAYIEVQRAHSLAALGDYPAAATGFRTAIDGLPSAFHRDRGVYLAREALAHAGAREPE CCCHHEEHHHHHHHHHHCCCCCHHHHHHHHHHHCHHHHHCCCCHHHHHHHHHHCCCCCCH QAATLGLNALTVGASTHSGCIMTSLRSLRDAVAGWQTVSQVREFRQAMDQVPTAITV HHHHHCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA