Definition Frankia sp. EAN1pec chromosome, complete genome.
Accession NC_009921
Length 8,982,042

Click here to switch to the map view.

The map label for this gene is 158314617

Identifier: 158314617

GI number: 158314617

Start: 3307928

End: 3308305

Strand: Direct

Name: 158314617

Synonym: Franean1_2796

Alternate gene names: NA

Gene position: 3307928-3308305 (Clockwise)

Preceding gene: 158314616

Following gene: 158314620

Centisome position: 36.83

GC content: 69.58

Gene sequence:

>378_bases
GTGCGCGTCACGCTGGAGACGCTGCTCCCCGACGTCTTCCACCGCAGTGTTCCGGACCCGGACGCGGTCGGGAAGACGGC
CAAGCAGACCGGGAGCGTCTTCCAGCGCCTCGATGACGCCGTCGTTCTCTACCGGGACCACCTCCACCGTGACCTGCCTG
CCGCTCTCGGGAACAGCTGGACGACCCTGACCGAAGGCATGGCCGTCCGACACGTCCTGACCCACAACGCCGGCCTCGTC
GACGCCCGCTATCTCTCGCGCGTCCCGCACGCCACCCAGACCATGGGCCAGCGGGTCCATGTCGGTCTCTGCCGGGTTCT
CGACTTCCTCGACGCGGCCACCGCCCTCGGCACTCTGCTCGCGCCGACGGACCCATGA

Upstream 100 bases:

>100_bases
CCCCGTCATCGCAACCCTGGAGGATCTCCCCGACGGCCAGCGCGCCAGGCTGGAGGCCGCGGGCGGTATCACCAGCATCT
ACGAATCGGCGATCACGGAC

Downstream 100 bases:

>100_bases
CCACCACCGTTCATCCAGTCGGACAGCGCGCGGCGGATCGAGGCCGCGGGCGGTCAGCCGCCGCCAGTGATGAGCGCGGG
AATGGAGATCACGGCGACCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 125; Mature: 125

Protein sequence:

>125_residues
MRVTLETLLPDVFHRSVPDPDAVGKTAKQTGSVFQRLDDAVVLYRDHLHRDLPAALGNSWTTLTEGMAVRHVLTHNAGLV
DARYLSRVPHATQTMGQRVHVGLCRVLDFLDAATALGTLLAPTDP

Sequences:

>Translated_125_residues
MRVTLETLLPDVFHRSVPDPDAVGKTAKQTGSVFQRLDDAVVLYRDHLHRDLPAALGNSWTTLTEGMAVRHVLTHNAGLV
DARYLSRVPHATQTMGQRVHVGLCRVLDFLDAATALGTLLAPTDP
>Mature_125_residues
MRVTLETLLPDVFHRSVPDPDAVGKTAKQTGSVFQRLDDAVVLYRDHLHRDLPAALGNSWTTLTEGMAVRHVLTHNAGLV
DARYLSRVPHATQTMGQRVHVGLCRVLDFLDAATALGTLLAPTDP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13660; Mature: 13660

Theoretical pI: Translated: 7.23; Mature: 7.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRVTLETLLPDVFHRSVPDPDAVGKTAKQTGSVFQRLDDAVVLYRDHLHRDLPAALGNSW
CEEEHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH
TTLTEGMAVRHVLTHNAGLVDARYLSRVPHATQTMGQRVHVGLCRVLDFLDAATALGTLL
HHHHHHHHHHHHHHCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
APTDP
CCCCC
>Mature Secondary Structure
MRVTLETLLPDVFHRSVPDPDAVGKTAKQTGSVFQRLDDAVVLYRDHLHRDLPAALGNSW
CEEEHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH
TTLTEGMAVRHVLTHNAGLVDARYLSRVPHATQTMGQRVHVGLCRVLDFLDAATALGTLL
HHHHHHHHHHHHHHCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
APTDP
CCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA