| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158314617
Identifier: 158314617
GI number: 158314617
Start: 3307928
End: 3308305
Strand: Direct
Name: 158314617
Synonym: Franean1_2796
Alternate gene names: NA
Gene position: 3307928-3308305 (Clockwise)
Preceding gene: 158314616
Following gene: 158314620
Centisome position: 36.83
GC content: 69.58
Gene sequence:
>378_bases GTGCGCGTCACGCTGGAGACGCTGCTCCCCGACGTCTTCCACCGCAGTGTTCCGGACCCGGACGCGGTCGGGAAGACGGC CAAGCAGACCGGGAGCGTCTTCCAGCGCCTCGATGACGCCGTCGTTCTCTACCGGGACCACCTCCACCGTGACCTGCCTG CCGCTCTCGGGAACAGCTGGACGACCCTGACCGAAGGCATGGCCGTCCGACACGTCCTGACCCACAACGCCGGCCTCGTC GACGCCCGCTATCTCTCGCGCGTCCCGCACGCCACCCAGACCATGGGCCAGCGGGTCCATGTCGGTCTCTGCCGGGTTCT CGACTTCCTCGACGCGGCCACCGCCCTCGGCACTCTGCTCGCGCCGACGGACCCATGA
Upstream 100 bases:
>100_bases CCCCGTCATCGCAACCCTGGAGGATCTCCCCGACGGCCAGCGCGCCAGGCTGGAGGCCGCGGGCGGTATCACCAGCATCT ACGAATCGGCGATCACGGAC
Downstream 100 bases:
>100_bases CCACCACCGTTCATCCAGTCGGACAGCGCGCGGCGGATCGAGGCCGCGGGCGGTCAGCCGCCGCCAGTGATGAGCGCGGG AATGGAGATCACGGCGACCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 125; Mature: 125
Protein sequence:
>125_residues MRVTLETLLPDVFHRSVPDPDAVGKTAKQTGSVFQRLDDAVVLYRDHLHRDLPAALGNSWTTLTEGMAVRHVLTHNAGLV DARYLSRVPHATQTMGQRVHVGLCRVLDFLDAATALGTLLAPTDP
Sequences:
>Translated_125_residues MRVTLETLLPDVFHRSVPDPDAVGKTAKQTGSVFQRLDDAVVLYRDHLHRDLPAALGNSWTTLTEGMAVRHVLTHNAGLV DARYLSRVPHATQTMGQRVHVGLCRVLDFLDAATALGTLLAPTDP >Mature_125_residues MRVTLETLLPDVFHRSVPDPDAVGKTAKQTGSVFQRLDDAVVLYRDHLHRDLPAALGNSWTTLTEGMAVRHVLTHNAGLV DARYLSRVPHATQTMGQRVHVGLCRVLDFLDAATALGTLLAPTDP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13660; Mature: 13660
Theoretical pI: Translated: 7.23; Mature: 7.23
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRVTLETLLPDVFHRSVPDPDAVGKTAKQTGSVFQRLDDAVVLYRDHLHRDLPAALGNSW CEEEHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH TTLTEGMAVRHVLTHNAGLVDARYLSRVPHATQTMGQRVHVGLCRVLDFLDAATALGTLL HHHHHHHHHHHHHHCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC APTDP CCCCC >Mature Secondary Structure MRVTLETLLPDVFHRSVPDPDAVGKTAKQTGSVFQRLDDAVVLYRDHLHRDLPAALGNSW CEEEHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH TTLTEGMAVRHVLTHNAGLVDARYLSRVPHATQTMGQRVHVGLCRVLDFLDAATALGTLL HHHHHHHHHHHHHHCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC APTDP CCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA