| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
Click here to switch to the map view.
The map label for this gene is 158314607
Identifier: 158314607
GI number: 158314607
Start: 3296676
End: 3296888
Strand: Direct
Name: 158314607
Synonym: Franean1_2786
Alternate gene names: NA
Gene position: 3296676-3296888 (Clockwise)
Preceding gene: 158314604
Following gene: 158314608
Centisome position: 36.7
GC content: 65.73
Gene sequence:
>213_bases GTGTGGCTGGGTTCGCCGATTTGCTCTCTGCCTGTGCGTCCGACGGTTACGTTCTGGGGTGTGCCGCTAGATTTCCTGCG GATGCTCGGCCGCGATGGCCACCCGACCCCGCTGGGGCAGGCCTTCGCCGAGTACGGCCGCATCGCGAAGACTCTGGCTC TGCTGGCGATAATGGAACCTCTCGACGACACCCATCGCCGGGCGGTGAGGTGA
Upstream 100 bases:
>100_bases CTCCGCTGGGTCGCCGCGGCGGTGGCTCACCTCGGCTACTGGGTCGCGCGTGGGGCCGCACGCGGTCGTTATCCCGTACC GGGGGCAGATCTAGACCACG
Downstream 100 bases:
>100_bases ACACCCGGACCACCGTGCAGGAATCCCGCCACAAATTCGCCCGCGTGATCTTCCACGGCCGCTGCGGGCAGATCTACCGG GAAGGGCAGGAGGACCAGCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 70; Mature: 70
Protein sequence:
>70_residues MWLGSPICSLPVRPTVTFWGVPLDFLRMLGRDGHPTPLGQAFAEYGRIAKTLALLAIMEPLDDTHRRAVR
Sequences:
>Translated_70_residues MWLGSPICSLPVRPTVTFWGVPLDFLRMLGRDGHPTPLGQAFAEYGRIAKTLALLAIMEPLDDTHRRAVR >Mature_70_residues MWLGSPICSLPVRPTVTFWGVPLDFLRMLGRDGHPTPLGQAFAEYGRIAKTLALLAIMEPLDDTHRRAVR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 7830; Mature: 7830
Theoretical pI: Translated: 9.44; Mature: 9.44
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 5.7 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 4.3 %Met (Mature Protein) 5.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MWLGSPICSLPVRPTVTFWGVPLDFLRMLGRDGHPTPLGQAFAEYGRIAKTLALLAIMEP CCCCCCCCCCCCCCCEEECCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH LDDTHRRAVR CCHHHHHCCC >Mature Secondary Structure MWLGSPICSLPVRPTVTFWGVPLDFLRMLGRDGHPTPLGQAFAEYGRIAKTLALLAIMEP CCCCCCCCCCCCCCCEEECCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH LDDTHRRAVR CCHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA