Definition Frankia sp. EAN1pec chromosome, complete genome.
Accession NC_009921
Length 8,982,042

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The map label for this gene is 158314598

Identifier: 158314598

GI number: 158314598

Start: 3284083

End: 3284967

Strand: Direct

Name: 158314598

Synonym: Franean1_2777

Alternate gene names: NA

Gene position: 3284083-3284967 (Clockwise)

Preceding gene: 158314592

Following gene: 158314599

Centisome position: 36.56

GC content: 70.51

Gene sequence:

>885_bases
GTGGACGTGCCGGCCCAGAGCAAGGACATCGCGGTCACCCTGGTCACCTTGATCATGGCGCTGGTTGTCGGGTTGACGTT
CTTGTTCGGCTTCGGCAATGTCCTCCAACTCGGGCTTCGGTTGGGGGTGCCGATCTGGATCGCGCCGCTGGTGGCCCCGG
CCGTCGATCTTTCTGTGGTGGGGCTTTTGCTCGGGACGCGGCAGTTGGCGTTGCGGGGCGCTCCCATCGAACTTCTGCGT
CCGGCCCGGCGGCTGCTGGTGTTCTCCAGCATTGTCACTCTGGCGCTCAATATCGCCGAGCCGGTGATCGCGGGTGACTA
CGCGAAGGCCGCGTTCGACAGCGTCGGTCCGCTTTTGTTGATCGGCTGGAGTGAGGTCGGCCCAGGATTGCTGCAGGCCA
TGCGCCACCCGCCCGCATGCCCCCAGAATCCCTCGAATCCGCCGGCTGGTGTGGACGCCACGCCGCCGGCACCAACCACC
GACGGCGGCAGCACCATCCCGCCGCCGGCGTCGCCGGAGGTTCCTCGGCAGCGTCGGCCCGCCACGGCTTCGGGTGGGCT
GTCCGATGAGGAGTGGCTGGCGTGGGCGCGGCGCGAGGATGCCCTGTACTGGGAGGAGAACCACCGGCCGATCTCCTCGG
ACGAGCTGCGTAAGCGACTGCACGTGGGGTCGAAGCGGGCCCGGAGCCTGGTCACGCGGCTACGCGCCGACGCCCGCCGC
GTCCTCGACGAACACGGCCCGGCCGGTGCCCCCGCGGCGGGCGACCTCCTCCTGTCCAGCCGCCCCGACAGCGACGGGGA
CGGGGACGGGGATGGTGTGGAGCTGGTCGAGATCGGGCCGGCGGAGCCGGCCGACCCGCCGGGTGTACTCGCCGCGGTCG
GATGA

Upstream 100 bases:

>100_bases
AAGGTCCTGAGATCGTCGTTCGTCCGGTAGGGACACGTGTCCTGACCAGGGATGACGCATGATGGCCCCGGACAGCACCA
GCCCGGCCGGTGCTTCGGCC

Downstream 100 bases:

>100_bases
CGACCCCCGCCCGTGCGGGCGGGGCCAGCGTGCACCGGCGGTCCGCGCCGGGCCGGCAGATGCCGGCGCGGTCACCCCCG
CCCTGCGGAGCGCTGGCCCC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 294; Mature: 294

Protein sequence:

>294_residues
MDVPAQSKDIAVTLVTLIMALVVGLTFLFGFGNVLQLGLRLGVPIWIAPLVAPAVDLSVVGLLLGTRQLALRGAPIELLR
PARRLLVFSSIVTLALNIAEPVIAGDYAKAAFDSVGPLLLIGWSEVGPGLLQAMRHPPACPQNPSNPPAGVDATPPAPTT
DGGSTIPPPASPEVPRQRRPATASGGLSDEEWLAWARREDALYWEENHRPISSDELRKRLHVGSKRARSLVTRLRADARR
VLDEHGPAGAPAAGDLLLSSRPDSDGDGDGDGVELVEIGPAEPADPPGVLAAVG

Sequences:

>Translated_294_residues
MDVPAQSKDIAVTLVTLIMALVVGLTFLFGFGNVLQLGLRLGVPIWIAPLVAPAVDLSVVGLLLGTRQLALRGAPIELLR
PARRLLVFSSIVTLALNIAEPVIAGDYAKAAFDSVGPLLLIGWSEVGPGLLQAMRHPPACPQNPSNPPAGVDATPPAPTT
DGGSTIPPPASPEVPRQRRPATASGGLSDEEWLAWARREDALYWEENHRPISSDELRKRLHVGSKRARSLVTRLRADARR
VLDEHGPAGAPAAGDLLLSSRPDSDGDGDGDGVELVEIGPAEPADPPGVLAAVG
>Mature_294_residues
MDVPAQSKDIAVTLVTLIMALVVGLTFLFGFGNVLQLGLRLGVPIWIAPLVAPAVDLSVVGLLLGTRQLALRGAPIELLR
PARRLLVFSSIVTLALNIAEPVIAGDYAKAAFDSVGPLLLIGWSEVGPGLLQAMRHPPACPQNPSNPPAGVDATPPAPTT
DGGSTIPPPASPEVPRQRRPATASGGLSDEEWLAWARREDALYWEENHRPISSDELRKRLHVGSKRARSLVTRLRADARR
VLDEHGPAGAPAAGDLLLSSRPDSDGDGDGDGVELVEIGPAEPADPPGVLAAVG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 30774; Mature: 30774

Theoretical pI: Translated: 4.98; Mature: 4.98

Prosite motif: PS00300 SRP54

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDVPAQSKDIAVTLVTLIMALVVGLTFLFGFGNVLQLGLRLGVPIWIAPLVAPAVDLSVV
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
GLLLGTRQLALRGAPIELLRPARRLLVFSSIVTLALNIAEPVIAGDYAKAAFDSVGPLLL
HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHCCCCEEE
IGWSEVGPGLLQAMRHPPACPQNPSNPPAGVDATPPAPTTDGGSTIPPPASPEVPRQRRP
EECHHCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
ATASGGLSDEEWLAWARREDALYWEENHRPISSDELRKRLHVGSKRARSLVTRLRADARR
CCCCCCCCHHHHHHHHHHCCCEEECCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHH
VLDEHGPAGAPAAGDLLLSSRPDSDGDGDGDGVELVEIGPAEPADPPGVLAAVG
HHHHCCCCCCCCCCCCEECCCCCCCCCCCCCCEEEEEECCCCCCCCCCCEEECC
>Mature Secondary Structure
MDVPAQSKDIAVTLVTLIMALVVGLTFLFGFGNVLQLGLRLGVPIWIAPLVAPAVDLSVV
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
GLLLGTRQLALRGAPIELLRPARRLLVFSSIVTLALNIAEPVIAGDYAKAAFDSVGPLLL
HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHCCCCEEE
IGWSEVGPGLLQAMRHPPACPQNPSNPPAGVDATPPAPTTDGGSTIPPPASPEVPRQRRP
EECHHCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
ATASGGLSDEEWLAWARREDALYWEENHRPISSDELRKRLHVGSKRARSLVTRLRADARR
CCCCCCCCHHHHHHHHHHCCCEEECCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHH
VLDEHGPAGAPAAGDLLLSSRPDSDGDGDGDGVELVEIGPAEPADPPGVLAAVG
HHHHCCCCCCCCCCCCEECCCCCCCCCCCCCCEEEEEECCCCCCCCCCCEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA