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The map label for this gene is insF1 [H]

Identifier: 158314577

GI number: 158314577

Start: 3260540

End: 3261280

Strand: Direct

Name: insF1 [H]

Synonym: Franean1_2753

Alternate gene names: 158314577

Gene position: 3260540-3261280 (Clockwise)

Preceding gene: 158314576

Following gene: 158314582

Centisome position: 36.3

GC content: 66.26

Gene sequence:

>741_bases
GTGAGCGACACGTTCGAGTTCATCGATGCGGAGTACGCCGCCCGCACCACCACGAACACCAGTGCACCAGCGCCGTCGGT
CATCCAGATGTGCGCCTGGCTTAGTGTCTCCCGTTCGGGTTTCTACGAGTGGCGTGACCGCCCCGCCTCCGCGACCGCGA
CCCGCCGCGGCGCACTCGCCACACTCGTCGTTCGGTCGTTCACCGCCTCCGACGGCACCTACGGCTACCGCCGTGTGCAC
GCTGACCTGCTCGCCTGGGGCCGCCCCTGCAGCCCCGAGCTCGTCCGCGCCCTCATGCGCGAGCAGGGCCTGGTGCCCTG
CCAGCCCCGCCCCTGGCGACACACCCTGACCGAGCCCGGCCAGACCCCGGCCGCGATCCCCGACCTGCTGCAGCGCGACT
TCACCGCCGACACTCCCGGAACCAAAATGGTCGGCGACATCACCTACATTCCCACCTGGGAAGGCTGGCTGTATCTCGCG
ACCGTCATCGACTGCCACACGAAAGCCGTCATCGGCTGGGCAATGGACGACAACTACAAGACCGGGCTCATCGAAACAGC
CATCACCATGGCCGCCCGTAACCACCAGCTCACCGACGGGGCGATTTTTCATTCGGACCGCGGAAGCAACACCGAACTCA
ACCGGTCCTCGCAACACCGGGTTGGTGGAGTGAGAGTAGCTGGTTGTTCATCGCTTCGGTGGAGGTCTTCCAGTCGAGGG
TCTTGCGGGGCCGGTCGTTGA

Upstream 100 bases:

>100_bases
AACGCGCCCGGCTACGTGAACTCGAGCGGCAGAACCGCGAGCTGCGCATGGAAAACGAGTTCCTGAAAAAAGCCGCAGCG
TACTTCGCCAAGGATCATCG

Downstream 100 bases:

>100_bases
GGGTCGCGGCGATGGTGGCGAGTTCGTGCCGGGTCCAGCGAGACAGGTCGGTGCCCTTGGGGAAGTACTGGCGTAGCAGG
CCGTTGGTGTTCTCGTTCGT

Product: integrase catalytic subunit

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 246; Mature: 245

Protein sequence:

>246_residues
MSDTFEFIDAEYAARTTTNTSAPAPSVIQMCAWLSVSRSGFYEWRDRPASATATRRGALATLVVRSFTASDGTYGYRRVH
ADLLAWGRPCSPELVRALMREQGLVPCQPRPWRHTLTEPGQTPAAIPDLLQRDFTADTPGTKMVGDITYIPTWEGWLYLA
TVIDCHTKAVIGWAMDDNYKTGLIETAITMAARNHQLTDGAIFHSDRGSNTELNRSSQHRVGGVRVAGCSSLRWRSSSRG
SCGAGR

Sequences:

>Translated_246_residues
MSDTFEFIDAEYAARTTTNTSAPAPSVIQMCAWLSVSRSGFYEWRDRPASATATRRGALATLVVRSFTASDGTYGYRRVH
ADLLAWGRPCSPELVRALMREQGLVPCQPRPWRHTLTEPGQTPAAIPDLLQRDFTADTPGTKMVGDITYIPTWEGWLYLA
TVIDCHTKAVIGWAMDDNYKTGLIETAITMAARNHQLTDGAIFHSDRGSNTELNRSSQHRVGGVRVAGCSSLRWRSSSRG
SCGAGR
>Mature_245_residues
SDTFEFIDAEYAARTTTNTSAPAPSVIQMCAWLSVSRSGFYEWRDRPASATATRRGALATLVVRSFTASDGTYGYRRVHA
DLLAWGRPCSPELVRALMREQGLVPCQPRPWRHTLTEPGQTPAAIPDLLQRDFTADTPGTKMVGDITYIPTWEGWLYLAT
VIDCHTKAVIGWAMDDNYKTGLIETAITMAARNHQLTDGAIFHSDRGSNTELNRSSQHRVGGVRVAGCSSLRWRSSSRGS
CGAGR

Specific function: Involved in the transposition of the insertion sequence IS3 [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 integrase catalytic domain [H]

Homologues:

Organism=Homo sapiens, GI310129419, Length=152, Percent_Identity=32.8947368421053, Blast_Score=79, Evalue=3e-15,
Organism=Escherichia coli, GI1788405, Length=185, Percent_Identity=37.8378378378378, Blast_Score=105, Evalue=3e-24,
Organism=Escherichia coli, GI1787263, Length=185, Percent_Identity=37.8378378378378, Blast_Score=105, Evalue=3e-24,
Organism=Escherichia coli, GI1786753, Length=185, Percent_Identity=37.8378378378378, Blast_Score=105, Evalue=3e-24,
Organism=Escherichia coli, GI1786570, Length=185, Percent_Identity=37.8378378378378, Blast_Score=105, Evalue=3e-24,
Organism=Escherichia coli, GI1786490, Length=185, Percent_Identity=37.8378378378378, Blast_Score=105, Evalue=3e-24,
Organism=Escherichia coli, GI1789981, Length=143, Percent_Identity=30.7692307692308, Blast_Score=69, Evalue=3e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001584
- InterPro:   IPR012337 [H]

Pfam domain/function: PF00665 rve [H]

EC number: NA

Molecular weight: Translated: 27072; Mature: 26940

Theoretical pI: Translated: 8.59; Mature: 8.59

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDTFEFIDAEYAARTTTNTSAPAPSVIQMCAWLSVSRSGFYEWRDRPASATATRRGALA
CCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHCCCCCCCHHHHHHHHH
TLVVRSFTASDGTYGYRRVHADLLAWGRPCSPELVRALMREQGLVPCQPRPWRHTLTEPG
HHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCC
QTPAAIPDLLQRDFTADTPGTKMVGDITYIPTWEGWLYLATVIDCHTKAVIGWAMDDNYK
CCCHHHHHHHHHCCCCCCCCCEEEECEEEECCCCCHHHHHHHHHHHCCEEEEEEECCCCC
TGLIETAITMAARNHQLTDGAIFHSDRGSNTELNRSSQHRVGGVRVAGCSSLRWRSSSRG
CHHHHHHHHHHHCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCC
SCGAGR
CCCCCC
>Mature Secondary Structure 
SDTFEFIDAEYAARTTTNTSAPAPSVIQMCAWLSVSRSGFYEWRDRPASATATRRGALA
CCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHCCCCCCCHHHHHHHHH
TLVVRSFTASDGTYGYRRVHADLLAWGRPCSPELVRALMREQGLVPCQPRPWRHTLTEPG
HHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCC
QTPAAIPDLLQRDFTADTPGTKMVGDITYIPTWEGWLYLATVIDCHTKAVIGWAMDDNYK
CCCHHHHHHHHHCCCCCCCCCEEEECEEEECCCCCHHHHHHHHHHHCCEEEEEEECCCCC
TGLIETAITMAARNHQLTDGAIFHSDRGSNTELNRSSQHRVGGVRVAGCSSLRWRSSSRG
CHHHHHHHHHHHCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCC
SCGAGR
CCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2987844; 9278503 [H]