| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158314532
Identifier: 158314532
GI number: 158314532
Start: 3203923
End: 3205101
Strand: Direct
Name: 158314532
Synonym: Franean1_2708
Alternate gene names: NA
Gene position: 3203923-3205101 (Clockwise)
Preceding gene: 158314531
Following gene: 158314533
Centisome position: 35.67
GC content: 65.82
Gene sequence:
>1179_bases ATGTCGTCCAACCCGTCGCCCTACCCGATCTTCGACGCGGACAATCACCTGTACGAGACTCAGGACGCGTTCACCAAGTA CCTGCCCGAGGAGTTCAAGGGCGCGATCCGGTACGTCGAGGTGGACGGCCGGACCAAGATCGCTGTCCGGGGTCACATCA GCGAGTACATCCCCAATCCGACCTTCGAGGTCGTCGCCCGGCCGGGCGCCCAGGAGGAGTACTTCCGCGTCGGCAACCCG GAGGGCAAGACCTACCGGGAGATCATCGGGAAGCCGATGCGGTCGATCGCGGCCTTCCGTGAGCCGAAGTCGCGCCTGGA GCTCATGGACGAGCAGGGCATCGAGCGGTCGCTGATGTTCCCGACGCTGGCGAGCCTGCTCGAGGAACGGATGAGCGACG ACCCGGAGCTGACCCATGTGGTCATCCACGCGCTCAACGAGTGGCTGTACGAGACGTGGCAGTTCAACTACGAGAACCGG ATCTTCACCACGCCGGTGATCACGCTGCCGATCGTGGAGAAGGCGATCGAGGAGCTGGAGTGGGTCGTGGAGCGCGGGGC GCGGGCGGTTCTGATCCGTCCGGCGCCGGTTCCCGGGTTCAGCGGCTCGCGGTCGTTCGGCCTGCCGGAGTTCGACCCGT TCTGGGAGAAGGTCGTCGAGCACGACGTCCTGGTTGCGCTGCACTCCTCCGACAGTGGTTACAGCCGGTACACCGACGAC TGGGCGAGCAACAAGCGGGAGTTCCTGCCGTTCCAGCCGGACATCTTCCGGATGATCGGCCAGTGGCGGCCGATCGAGGA CTCGGTGGCCGCCCTGATCTGCCACGGCGCGCTGTCCCGGTTCCCCACCCTGAAGGTCGCCGTCGTCGAGAACGGCGCGT CCTGGGTCGCCCCGCTGATCAAGACCCTGAAGGACGTCTACAAGAAGCACCCGCAGCAGTTCGCCGAGGAGCCGGTGTCG GTGCTGCGGCGCAATGTGCACATCAGCCCGTTCTGGGAAGAGAACATGGCTGACCTCGCCGAGCTGCTCGGCATCGAGCG GGTGCTGTTCGGCTCGGACTTCCCGCACCCCGAGGGCCTGGGTGACCCGGCGAGCTTCGTCGATGAGCTCAAGAACCTCT CCGAGGAGGAGAAGGCCCTGATCATGGGCGGCAACCTGGCCAGGCTGATCCCGGTGTGA
Upstream 100 bases:
>100_bases GGAGCCACACCGACCCGGCCGTGCGCGCCGAGGTGTTGTTGCCGCCATGACCGCACAGCCCCGATGCCCTTGCACGTCCG ATCACCAGAGGAGGATCTCG
Downstream 100 bases:
>100_bases CCGGCTCCGCGGCGGATCGGTGACGTCACCCTCGACCGCCCCGGCCCGGCCGGGGCGGTCGAGGGCCACCTGCCGGGCCC GATACACCAGGGCCCGGACC
Product: amidohydrolase 2
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 392; Mature: 391
Protein sequence:
>392_residues MSSNPSPYPIFDADNHLYETQDAFTKYLPEEFKGAIRYVEVDGRTKIAVRGHISEYIPNPTFEVVARPGAQEEYFRVGNP EGKTYREIIGKPMRSIAAFREPKSRLELMDEQGIERSLMFPTLASLLEERMSDDPELTHVVIHALNEWLYETWQFNYENR IFTTPVITLPIVEKAIEELEWVVERGARAVLIRPAPVPGFSGSRSFGLPEFDPFWEKVVEHDVLVALHSSDSGYSRYTDD WASNKREFLPFQPDIFRMIGQWRPIEDSVAALICHGALSRFPTLKVAVVENGASWVAPLIKTLKDVYKKHPQQFAEEPVS VLRRNVHISPFWEENMADLAELLGIERVLFGSDFPHPEGLGDPASFVDELKNLSEEEKALIMGGNLARLIPV
Sequences:
>Translated_392_residues MSSNPSPYPIFDADNHLYETQDAFTKYLPEEFKGAIRYVEVDGRTKIAVRGHISEYIPNPTFEVVARPGAQEEYFRVGNP EGKTYREIIGKPMRSIAAFREPKSRLELMDEQGIERSLMFPTLASLLEERMSDDPELTHVVIHALNEWLYETWQFNYENR IFTTPVITLPIVEKAIEELEWVVERGARAVLIRPAPVPGFSGSRSFGLPEFDPFWEKVVEHDVLVALHSSDSGYSRYTDD WASNKREFLPFQPDIFRMIGQWRPIEDSVAALICHGALSRFPTLKVAVVENGASWVAPLIKTLKDVYKKHPQQFAEEPVS VLRRNVHISPFWEENMADLAELLGIERVLFGSDFPHPEGLGDPASFVDELKNLSEEEKALIMGGNLARLIPV >Mature_391_residues SSNPSPYPIFDADNHLYETQDAFTKYLPEEFKGAIRYVEVDGRTKIAVRGHISEYIPNPTFEVVARPGAQEEYFRVGNPE GKTYREIIGKPMRSIAAFREPKSRLELMDEQGIERSLMFPTLASLLEERMSDDPELTHVVIHALNEWLYETWQFNYENRI FTTPVITLPIVEKAIEELEWVVERGARAVLIRPAPVPGFSGSRSFGLPEFDPFWEKVVEHDVLVALHSSDSGYSRYTDDW ASNKREFLPFQPDIFRMIGQWRPIEDSVAALICHGALSRFPTLKVAVVENGASWVAPLIKTLKDVYKKHPQQFAEEPVSV LRRNVHISPFWEENMADLAELLGIERVLFGSDFPHPEGLGDPASFVDELKNLSEEEKALIMGGNLARLIPV
Specific function: Unknown
COG id: COG2159
COG function: function code R; Predicted metal-dependent hydrolase of the TIM-barrel fold
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 44687; Mature: 44556
Theoretical pI: Translated: 4.75; Mature: 4.75
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSNPSPYPIFDADNHLYETQDAFTKYLPEEFKGAIRYVEVDGRTKIAVRGHISEYIPNP CCCCCCCCEEECCCCCCHHHHHHHHHHCCHHHHCCEEEEEECCCEEEEEECCHHHHCCCC TFEVVARPGAQEEYFRVGNPEGKTYREIIGKPMRSIAAFREPKSRLELMDEQGIERSLMF CCEEEECCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCHHHHHH PTLASLLEERMSDDPELTHVVIHALNEWLYETWQFNYENRIFTTPVITLPIVEKAIEELE HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCHHHHHHHHHHHHHH WVVERGARAVLIRPAPVPGFSGSRSFGLPEFDPFWEKVVEHDVLVALHSSDSGYSRYTDD HHHHCCCCEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHCCCEEEEEECCCCCCCCCCCH WASNKREFLPFQPDIFRMIGQWRPIEDSVAALICHGALSRFPTLKVAVVENGASWVAPLI HHCCCCCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCEEEEEEECCCHHHHHHH KTLKDVYKKHPQQFAEEPVSVLRRNVHISPFWEENMADLAELLGIERVLFGSDFPHPEGL HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCC GDPASFVDELKNLSEEEKALIMGGNLARLIPV CCHHHHHHHHHCCCHHHCEEEECCCCHHHCCC >Mature Secondary Structure SSNPSPYPIFDADNHLYETQDAFTKYLPEEFKGAIRYVEVDGRTKIAVRGHISEYIPNP CCCCCCCEEECCCCCCHHHHHHHHHHCCHHHHCCEEEEEECCCEEEEEECCHHHHCCCC TFEVVARPGAQEEYFRVGNPEGKTYREIIGKPMRSIAAFREPKSRLELMDEQGIERSLMF CCEEEECCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCHHHHHH PTLASLLEERMSDDPELTHVVIHALNEWLYETWQFNYENRIFTTPVITLPIVEKAIEELE HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCHHHHHHHHHHHHHH WVVERGARAVLIRPAPVPGFSGSRSFGLPEFDPFWEKVVEHDVLVALHSSDSGYSRYTDD HHHHCCCCEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHCCCEEEEEECCCCCCCCCCCH WASNKREFLPFQPDIFRMIGQWRPIEDSVAALICHGALSRFPTLKVAVVENGASWVAPLI HHCCCCCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCEEEEEEECCCHHHHHHH KTLKDVYKKHPQQFAEEPVSVLRRNVHISPFWEENMADLAELLGIERVLFGSDFPHPEGL HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCC GDPASFVDELKNLSEEEKALIMGGNLARLIPV CCHHHHHHHHHCCCHHHCEEEECCCCHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA