| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158314508
Identifier: 158314508
GI number: 158314508
Start: 3174974
End: 3175837
Strand: Direct
Name: 158314508
Synonym: Franean1_2684
Alternate gene names: NA
Gene position: 3174974-3175837 (Clockwise)
Preceding gene: 158314507
Following gene: 158314514
Centisome position: 35.35
GC content: 65.97
Gene sequence:
>864_bases GTGACCATGCCCACCACGCAGCGGGTGATCGACACACTGATCGGGTTTCGGGCCAGCCACAACATCCCGCCCATCGCCGC GCTGCCAAACCGGCGCTCCAGCGACAACCCGATCAGCTACATGTTCAAAGGCATCCCCCAAGACCGCGCCGTGGATGCCA CCGTCGAGGAAGCTGTCGACGAGACCGTCGCCAAGATGGACGCCCACGGCATCGCCGTCGGTCTCGTCAGCCTGACGAAC GACGCCACCCAGGTCGCCTTGCGGCGCTATCCCGACCGGTTCGCCGCGTCGCTGGCGGTGGACGGCAACGACGTCATGGG CGCTGTCCGGGCCATCCACCACGCGGTCGACGAGTACGGCATCCGGGCCGTCACGACCTTCCCCTCCGGCGTCAGCCCAC AGCTTCCGATCGACGATCGTCACTGGTACCCGGTCTACGCCACCTGCGTCGACCTCGGCCTGCCCGTCTTCGTCTCCGTC GGCATCCCCGGCCCCAGGGTGCCGATGGCCCCGCAGAAGGTCGAACTGATCGACCAGGTCTGCTACGACTTCCCCGAGCT GGTCTTCGTGATGCGCCACGGCGCCGAGCCCTGGGTCGACCTCGCGATCAAGCTGATGCTCAAGTGGCCGAACCTCTACT ACTCGACCACCGCGTTCGCCCCGCGCCACTACCCGCAGGCGATCATCGACTACGCGAACTCCCGCGGCTCCGACAGGATT CTCTATGGTGGGTATTTCCCGTTCGGGATCGAGCTCGAACGGACGTTCACCGAACTGCCCGACGTGCCGTTCAAGGACGA CGTTTGGCCGAAGTTCCTCCACGACAACGCCGCTCGCGTCCTCAGATACGCCTCCACCACCTGA
Upstream 100 bases:
>100_bases GCGCTCCACGGTTCGCCGGCCTCGACCCGCGGCACGCCCGCTACCCGCTGCCCGGCGTCGAGGCCCTGCCCAGCGACGCC GCAGAAAGGAAAGCAGACCT
Downstream 100 bases:
>100_bases CCGCATCGCACCGGTCATCCCCGGCGAAGCGGATCCCGAGCCATGCCGCCCCGGCACTGAGCTCGAAGCGCCCCTGCGGC GCGGGGGTCACAGGGCCGCG
Product: amidohydrolase 2
Products: NA
Alternate protein names: Amidohydrolase; Amidase; Metal-Dependent Hydrolase; Antibiotic-Resistance Protein; Amidohydrolase Family
Number of amino acids: Translated: 287; Mature: 286
Protein sequence:
>287_residues MTMPTTQRVIDTLIGFRASHNIPPIAALPNRRSSDNPISYMFKGIPQDRAVDATVEEAVDETVAKMDAHGIAVGLVSLTN DATQVALRRYPDRFAASLAVDGNDVMGAVRAIHHAVDEYGIRAVTTFPSGVSPQLPIDDRHWYPVYATCVDLGLPVFVSV GIPGPRVPMAPQKVELIDQVCYDFPELVFVMRHGAEPWVDLAIKLMLKWPNLYYSTTAFAPRHYPQAIIDYANSRGSDRI LYGGYFPFGIELERTFTELPDVPFKDDVWPKFLHDNAARVLRYASTT
Sequences:
>Translated_287_residues MTMPTTQRVIDTLIGFRASHNIPPIAALPNRRSSDNPISYMFKGIPQDRAVDATVEEAVDETVAKMDAHGIAVGLVSLTN DATQVALRRYPDRFAASLAVDGNDVMGAVRAIHHAVDEYGIRAVTTFPSGVSPQLPIDDRHWYPVYATCVDLGLPVFVSV GIPGPRVPMAPQKVELIDQVCYDFPELVFVMRHGAEPWVDLAIKLMLKWPNLYYSTTAFAPRHYPQAIIDYANSRGSDRI LYGGYFPFGIELERTFTELPDVPFKDDVWPKFLHDNAARVLRYASTT >Mature_286_residues TMPTTQRVIDTLIGFRASHNIPPIAALPNRRSSDNPISYMFKGIPQDRAVDATVEEAVDETVAKMDAHGIAVGLVSLTND ATQVALRRYPDRFAASLAVDGNDVMGAVRAIHHAVDEYGIRAVTTFPSGVSPQLPIDDRHWYPVYATCVDLGLPVFVSVG IPGPRVPMAPQKVELIDQVCYDFPELVFVMRHGAEPWVDLAIKLMLKWPNLYYSTTAFAPRHYPQAIIDYANSRGSDRIL YGGYFPFGIELERTFTELPDVPFKDDVWPKFLHDNAARVLRYASTT
Specific function: Unknown
COG id: COG2159
COG function: function code R; Predicted metal-dependent hydrolase of the TIM-barrel fold
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31979; Mature: 31848
Theoretical pI: Translated: 5.84; Mature: 5.84
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTMPTTQRVIDTLIGFRASHNIPPIAALPNRRSSDNPISYMFKGIPQDRAVDATVEEAVD CCCCHHHHHHHHHHHHHHCCCCCCEEECCCCCCCCCCHHHHHHCCCCCCCHHHHHHHHHH ETVAKMDAHGIAVGLVSLTNDATQVALRRYPDRFAASLAVDGNDVMGAVRAIHHAVDEYG HHHHHHCCCCCEEEEEECCCHHHHHHHHHCCHHHHHEEEECCHHHHHHHHHHHHHHHHHC IRAVTTFPSGVSPQLPIDDRHWYPVYATCVDLGLPVFVSVGIPGPRVPMAPQKVELIDQV CEEEEECCCCCCCCCCCCCCCCCHHHHHHHHCCCCEEEEECCCCCCCCCCCHHHHHHHHH CYDFPELVFVMRHGAEPWVDLAIKLMLKWPNLYYSTTAFAPRHYPQAIIDYANSRGSDRI HHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCEEECCCCCCCHHHHHHHHHHCCCCCCEE LYGGYFPFGIELERTFTELPDVPFKDDVWPKFLHDNAARVLRYASTT EECCCCCCCEEHHHHHHHCCCCCCCCCCCHHHHHCCHHHHHHHHCCC >Mature Secondary Structure TMPTTQRVIDTLIGFRASHNIPPIAALPNRRSSDNPISYMFKGIPQDRAVDATVEEAVD CCCHHHHHHHHHHHHHHCCCCCCEEECCCCCCCCCCHHHHHHCCCCCCCHHHHHHHHHH ETVAKMDAHGIAVGLVSLTNDATQVALRRYPDRFAASLAVDGNDVMGAVRAIHHAVDEYG HHHHHHCCCCCEEEEEECCCHHHHHHHHHCCHHHHHEEEECCHHHHHHHHHHHHHHHHHC IRAVTTFPSGVSPQLPIDDRHWYPVYATCVDLGLPVFVSVGIPGPRVPMAPQKVELIDQV CEEEEECCCCCCCCCCCCCCCCCHHHHHHHHCCCCEEEEECCCCCCCCCCCHHHHHHHHH CYDFPELVFVMRHGAEPWVDLAIKLMLKWPNLYYSTTAFAPRHYPQAIIDYANSRGSDRI HHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCEEECCCCCCCHHHHHHHHHHCCCCCCEE LYGGYFPFGIELERTFTELPDVPFKDDVWPKFLHDNAARVLRYASTT EECCCCCCCEEHHHHHHHCCCCCCCCCCCHHHHHCCHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA