| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158314483
Identifier: 158314483
GI number: 158314483
Start: 3143317
End: 3143931
Strand: Direct
Name: 158314483
Synonym: Franean1_2656
Alternate gene names: NA
Gene position: 3143317-3143931 (Clockwise)
Preceding gene: 158314480
Following gene: 158314484
Centisome position: 35.0
GC content: 68.78
Gene sequence:
>615_bases ATGTCTCCGCTGCAACGCCTCTACCGCACCAAGCTGACCCTCTTGGCCGTGATCCTCACGGTTCTGGGTGTGGCGTTGCT GGCGCTCGGCCAGTACAGCGCCCTGGCGACCACCGCTCCGTGGCTGGCCTGGCTGCCGCTCTCTGAGCTGGGATCGACCT TCTTCGGCAGCGGCCTGATCGTCGTGGCATTCGAGTACATCAACGAACGCGATGCCGACGAGCGGGCCAATGAACGCCTC CGCCGCATCCTGCGGGAGGAAGTTCCGGCCATCCGCGACGCCGTGGTCGGCGGCTTCGCCTTCGCGCCGAATGCCCTGGT GGACGTGGCCTCACCGGAGACCCTTGACCGGGTGGTCCGCAACACCCTGGCCATCCAGCTCGGCGACCAGGCTCTGGCCG ACGATCTCTACACCGATCTCCGCCGCCAGGTGGCCGCTTCCACCGAACGCCGTCGGGACACGCGTGTCTCCGTCAGCCTC ACGCCGTGGGCCAAGGGGCCGGCCGCCGGCGCCGGCAGCATGTTCGTGGCCACGACCGCCGGGAGTACCGCGTCCAGCTG GCCGAGTCCACCCGCCGCTTCGCCTGTACACATCCGACCCCGACGAATACCGTGA
Upstream 100 bases:
>100_bases CAATCTCGGCGGCGCGGCGCTTCCGGCATCCACGGCCGGAGCGCCGCGCCGCTCCTGTTCGCAGGCAAGATCACGAACGT GCTAAACTGATCTTGAATAC
Downstream 100 bases:
>100_bases GCTGCTGCTTGACTCCACCATGATCGAGGCCCACTACTTCGAGCCGGTCGCCGGCCTGGACGCCGCGTCACCGGAAGCCT TCGAGCTGCTCCAGTTCACC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 204; Mature: 203
Protein sequence:
>204_residues MSPLQRLYRTKLTLLAVILTVLGVALLALGQYSALATTAPWLAWLPLSELGSTFFGSGLIVVAFEYINERDADERANERL RRILREEVPAIRDAVVGGFAFAPNALVDVASPETLDRVVRNTLAIQLGDQALADDLYTDLRRQVAASTERRRDTRVSVSL TPWAKGPAAGAGSMFVATTAGSTASSWPSPPAASPVHIRPRRIP
Sequences:
>Translated_204_residues MSPLQRLYRTKLTLLAVILTVLGVALLALGQYSALATTAPWLAWLPLSELGSTFFGSGLIVVAFEYINERDADERANERL RRILREEVPAIRDAVVGGFAFAPNALVDVASPETLDRVVRNTLAIQLGDQALADDLYTDLRRQVAASTERRRDTRVSVSL TPWAKGPAAGAGSMFVATTAGSTASSWPSPPAASPVHIRPRRIP >Mature_203_residues SPLQRLYRTKLTLLAVILTVLGVALLALGQYSALATTAPWLAWLPLSELGSTFFGSGLIVVAFEYINERDADERANERLR RILREEVPAIRDAVVGGFAFAPNALVDVASPETLDRVVRNTLAIQLGDQALADDLYTDLRRQVAASTERRRDTRVSVSLT PWAKGPAAGAGSMFVATTAGSTASSWPSPPAASPVHIRPRRIP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22020; Mature: 21889
Theoretical pI: Translated: 9.98; Mature: 9.98
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 0.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSPLQRLYRTKLTLLAVILTVLGVALLALGQYSALATTAPWLAWLPLSELGSTFFGSGLI CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHCCHHHHHHHHHCCCHH VVAFEYINERDADERANERLRRILREEVPAIRDAVVGGFAFAPNALVDVASPETLDRVVR HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHEECCCHHHHHHHHH NTLAIQLGDQALADDLYTDLRRQVAASTERRRDTRVSVSLTPWAKGPAAGAGSMFVATTA HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCCCCCCCCEEEEEEC GSTASSWPSPPAASPVHIRPRRIP CCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure SPLQRLYRTKLTLLAVILTVLGVALLALGQYSALATTAPWLAWLPLSELGSTFFGSGLI CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHCCHHHHHHHHHCCCHH VVAFEYINERDADERANERLRRILREEVPAIRDAVVGGFAFAPNALVDVASPETLDRVVR HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHEECCCHHHHHHHHH NTLAIQLGDQALADDLYTDLRRQVAASTERRRDTRVSVSLTPWAKGPAAGAGSMFVATTA HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCCCCCCCCEEEEEEC GSTASSWPSPPAASPVHIRPRRIP CCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA