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The map label for this gene is 158314471

Identifier: 158314471

GI number: 158314471

Start: 3124646

End: 3127354

Strand: Direct

Name: 158314471

Synonym: Franean1_2644

Alternate gene names: NA

Gene position: 3124646-3127354 (Clockwise)

Preceding gene: 158314470

Following gene: 158314472

Centisome position: 34.79

GC content: 58.55

Gene sequence:

>2709_bases
GTGATCTGCCAGAACATCGCCATCCCGGTCGGTGATCGAGGCTTCCTCTCGCAGAACGTGCTTGGGCAGCTCCGGAATCT
CGTCGAGGGGCTTATTGTATGGGCGCATCTCAGCGACCGCGTGACCGAGTTCCACTACAACCAGGTCGGGCCGGCGCTGG
ATGCCGTGAAGGCGACCGCGAAGTTTAGGCTCCTGAGTAGATTTCATGACCTGCTCCAGGCAAGCGTTTCACACTACACA
CTGGATCGCGATCCGTCCGAGCGGTTGATGCTGAAGTACTACGAGTACCTACTCCGCACCCGCGATCTGGCGCAGGCGCA
GTTCGGCATCACAATCCTGAACAACATTGAACAGTTTCCGATCGACCTCGACCCTTCACTGCGTGACTACTACGAGAAGA
TCGCGGCGTGCATCGAGCAGAAAAGAGCGACGCCACCCTCAACCGCCCGTCGCGAGCGATACTACATTCACAGCTCGCGA
CCATTCTTCACCGGCGGCCGCATCTACTACGAGGTGACATTTTATCTCGCCCACAACCGGACGAGCAAGTTCGATCGCAT
CATTGGGTTCACCGACATCGACCTCACCAACAAGTACGCGGCCTACCTGGGGCTGGCGAGCGACACGATCGAAGTTCTTG
GCCAGACGATGCCGATCATGCTGATCCGCTCGTGGGACGTGTCGATCCGTCCGTGCGAATTTGACAACTTCGCGCGCTTC
TTCGAGGTCTCGCACGATCGAGTTAGCACGTCGCACTCCGAGTACCGCAACCTGATGCAGTACCTCACCAGCATGCGCTC
AAGCCTGCTCGATCTCGTGGACATGACCGACGCGAGTTACGGCCGGGTCCGCGCCCGGACACTGGACGGTGCACAACGTA
GTCCTTTGATCTTCCCTGTGCTCGACCGTGCGCGGACGCTCATCCGCGAGAACCGACCAGGGGCCCGACTGATGCGGTAC
CTCATGCTGCGGATGAACAATCGAGTTATCAAGGACCAGTTCGATTCCGACGAGTGCACTGGACTTTCCCAGTTGCGTGT
TTCCTGGAGTTGCAAGCCCTTCGATACGATGCCATTCTGCACATCACCACGCCGACACAACCCGCACTTTTCGGACCTCG
CCGAGAGCCTGGACGCCAGAAGCCGACCGCACGAGCTACTCGCACGGCGAGTCAGGAGCAACGTCGACCAGCACGGAATG
ATCTACACACCTGAATCCGACCTAGCGGACTTCGGTGACATCGACAAGCTGATCGCGCGCCACAACCAGCTGCTCCCGAC
CAATGCGCGACACGCACCGCGTAAGCTGGTGCATGCAAACGGGCACGTGTTCATCGTCGGATACGAGGACGACACAGCCG
CGATCATCGAAAAGCTCCAGGCGATCGCCGCCGGCGGTGTCCCCAACCACAGCAGCGACGTGCAGGCATGGATTAACGCG
AACCCGGGCGTCATCGATGACCCCCTGAAAGCCGAGGCTCTAACGGAGCTGTTCGAGCACTCGAACGTCGCCCTCGTCTA
CGGCGCGGCCGGTACGGGAAAGTCGACGATGCTGAATCATATCGCGAACTACTTCGATGGCGAACGGAAGCTTTTCCTGG
CGCATACGAACCCGGCCGTCGACAACCTGAGGAGACGAGTACAGGCGCCGAACAGCGAGTTCAGCACGATCAGCAAGCAC
TTGCGCAGCAGTACGCCGTTCGACGGAACGTACGACGTCCTTGTGATCGACGAGTGCAGCACCGTGGGAAACGCTAGCCT
GCTCGAAGTTCTTCAGAACACATCCTTCGACCTGCTCGTGCTCGTTGGCGACGTCTACCAGATCGAGTCGATCGAGTTCG
GAAACTGGTTCAGCACCATCCGTTCGTACATCCCGAGCGAGTCCGTATTCGAGCTCACAAAGCCCTTCAGAACGACCGAC
CAGGCGCTTCTCACCCTCTGGGACAGGGTACGGAACCTGGACGACCGCATCGAAGAGTCACTCTCCAAGAACGGCTACTC
CACAGTGCTAGGGGACTCTCTTTTCCAGCGTCGGAGCGACGATGAGATCGTGCTCTGCCTGAATTATGACGGCCTTTACG
GCATCAACAACGTCAACCGCTTCCTACAGGCGGGCAATCCGAATCCAGCTGTCACCTGGAGCGAGTCTACGTACAAGGTC
GGCGATCCTGTACTCTTCAACGAGTCCGATCGGTTCCGCCCAGTCATCTTCAACAACCTGAAGGGCCAGATTGTCAAGAT
CGACCGTGCGCGCGGCCGTATCACGTTCGATGTGAATCTCGAAACTGACGTCACTCCAGCCGACGTGTTCGGCACGGACC
TGCGCTGGGTCGAAGGCACGACTGTTCAGTTCGACGTCTTCGAGCGCGGCAACAGCGACGATGATGACGATACGGTAATC
ACGATGGTGCCGTTTCAGATCGCGTACGCCGTGTCGATCCACAAGGCGCAGGGCCTTGAGTACAAGTCTGTCAAGGTTGT
CATCACGGATGCTAATGAGGAGAGCATTTCCCACAGCATCTTCTACACCGCGATCACACGCGCTCGGGAGCGTCTTGAAG
TCTTTTGGACTCCGGAGACACAGCAACGAATCCTCAGCCGTCTCGCTGTGCGTGAGAACATGAAGGACGAGAATCTGTTG
AGGGTTCGCCGAGGCGTGATCCCTATCGCAAAGCGACCGAAACGCCAAAAGACGCGCCAGCAGCCGTAG

Upstream 100 bases:

>100_bases
CGGGGTAGACGGACAAATCCGCGGCTTCGAGCGCGATCCTTTGGGAAGTAGAGCGGGAGCGATGGCGTCAGTAGAAGAGC
AAGTACGGAGCGCCGACAGC

Downstream 100 bases:

>100_bases
ACCTGACTTAGGCCAAGATCTGATCGTCTTGATGTCTGCAGGCCGCTGACCTGGGGATTCGGTTCGGGAGGCACGCACTA
ATCGGTGTGGTGGTCGTGGC

Product: helicase

Products: NA

Alternate protein names: Exodeoxyribonuclease V Alpha Subunit RecD; Helicase RecD/TraA Family

Number of amino acids: Translated: 902; Mature: 902

Protein sequence:

>902_residues
MICQNIAIPVGDRGFLSQNVLGQLRNLVEGLIVWAHLSDRVTEFHYNQVGPALDAVKATAKFRLLSRFHDLLQASVSHYT
LDRDPSERLMLKYYEYLLRTRDLAQAQFGITILNNIEQFPIDLDPSLRDYYEKIAACIEQKRATPPSTARRERYYIHSSR
PFFTGGRIYYEVTFYLAHNRTSKFDRIIGFTDIDLTNKYAAYLGLASDTIEVLGQTMPIMLIRSWDVSIRPCEFDNFARF
FEVSHDRVSTSHSEYRNLMQYLTSMRSSLLDLVDMTDASYGRVRARTLDGAQRSPLIFPVLDRARTLIRENRPGARLMRY
LMLRMNNRVIKDQFDSDECTGLSQLRVSWSCKPFDTMPFCTSPRRHNPHFSDLAESLDARSRPHELLARRVRSNVDQHGM
IYTPESDLADFGDIDKLIARHNQLLPTNARHAPRKLVHANGHVFIVGYEDDTAAIIEKLQAIAAGGVPNHSSDVQAWINA
NPGVIDDPLKAEALTELFEHSNVALVYGAAGTGKSTMLNHIANYFDGERKLFLAHTNPAVDNLRRRVQAPNSEFSTISKH
LRSSTPFDGTYDVLVIDECSTVGNASLLEVLQNTSFDLLVLVGDVYQIESIEFGNWFSTIRSYIPSESVFELTKPFRTTD
QALLTLWDRVRNLDDRIEESLSKNGYSTVLGDSLFQRRSDDEIVLCLNYDGLYGINNVNRFLQAGNPNPAVTWSESTYKV
GDPVLFNESDRFRPVIFNNLKGQIVKIDRARGRITFDVNLETDVTPADVFGTDLRWVEGTTVQFDVFERGNSDDDDDTVI
TMVPFQIAYAVSIHKAQGLEYKSVKVVITDANEESISHSIFYTAITRARERLEVFWTPETQQRILSRLAVRENMKDENLL
RVRRGVIPIAKRPKRQKTRQQP

Sequences:

>Translated_902_residues
MICQNIAIPVGDRGFLSQNVLGQLRNLVEGLIVWAHLSDRVTEFHYNQVGPALDAVKATAKFRLLSRFHDLLQASVSHYT
LDRDPSERLMLKYYEYLLRTRDLAQAQFGITILNNIEQFPIDLDPSLRDYYEKIAACIEQKRATPPSTARRERYYIHSSR
PFFTGGRIYYEVTFYLAHNRTSKFDRIIGFTDIDLTNKYAAYLGLASDTIEVLGQTMPIMLIRSWDVSIRPCEFDNFARF
FEVSHDRVSTSHSEYRNLMQYLTSMRSSLLDLVDMTDASYGRVRARTLDGAQRSPLIFPVLDRARTLIRENRPGARLMRY
LMLRMNNRVIKDQFDSDECTGLSQLRVSWSCKPFDTMPFCTSPRRHNPHFSDLAESLDARSRPHELLARRVRSNVDQHGM
IYTPESDLADFGDIDKLIARHNQLLPTNARHAPRKLVHANGHVFIVGYEDDTAAIIEKLQAIAAGGVPNHSSDVQAWINA
NPGVIDDPLKAEALTELFEHSNVALVYGAAGTGKSTMLNHIANYFDGERKLFLAHTNPAVDNLRRRVQAPNSEFSTISKH
LRSSTPFDGTYDVLVIDECSTVGNASLLEVLQNTSFDLLVLVGDVYQIESIEFGNWFSTIRSYIPSESVFELTKPFRTTD
QALLTLWDRVRNLDDRIEESLSKNGYSTVLGDSLFQRRSDDEIVLCLNYDGLYGINNVNRFLQAGNPNPAVTWSESTYKV
GDPVLFNESDRFRPVIFNNLKGQIVKIDRARGRITFDVNLETDVTPADVFGTDLRWVEGTTVQFDVFERGNSDDDDDTVI
TMVPFQIAYAVSIHKAQGLEYKSVKVVITDANEESISHSIFYTAITRARERLEVFWTPETQQRILSRLAVRENMKDENLL
RVRRGVIPIAKRPKRQKTRQQP
>Mature_902_residues
MICQNIAIPVGDRGFLSQNVLGQLRNLVEGLIVWAHLSDRVTEFHYNQVGPALDAVKATAKFRLLSRFHDLLQASVSHYT
LDRDPSERLMLKYYEYLLRTRDLAQAQFGITILNNIEQFPIDLDPSLRDYYEKIAACIEQKRATPPSTARRERYYIHSSR
PFFTGGRIYYEVTFYLAHNRTSKFDRIIGFTDIDLTNKYAAYLGLASDTIEVLGQTMPIMLIRSWDVSIRPCEFDNFARF
FEVSHDRVSTSHSEYRNLMQYLTSMRSSLLDLVDMTDASYGRVRARTLDGAQRSPLIFPVLDRARTLIRENRPGARLMRY
LMLRMNNRVIKDQFDSDECTGLSQLRVSWSCKPFDTMPFCTSPRRHNPHFSDLAESLDARSRPHELLARRVRSNVDQHGM
IYTPESDLADFGDIDKLIARHNQLLPTNARHAPRKLVHANGHVFIVGYEDDTAAIIEKLQAIAAGGVPNHSSDVQAWINA
NPGVIDDPLKAEALTELFEHSNVALVYGAAGTGKSTMLNHIANYFDGERKLFLAHTNPAVDNLRRRVQAPNSEFSTISKH
LRSSTPFDGTYDVLVIDECSTVGNASLLEVLQNTSFDLLVLVGDVYQIESIEFGNWFSTIRSYIPSESVFELTKPFRTTD
QALLTLWDRVRNLDDRIEESLSKNGYSTVLGDSLFQRRSDDEIVLCLNYDGLYGINNVNRFLQAGNPNPAVTWSESTYKV
GDPVLFNESDRFRPVIFNNLKGQIVKIDRARGRITFDVNLETDVTPADVFGTDLRWVEGTTVQFDVFERGNSDDDDDTVI
TMVPFQIAYAVSIHKAQGLEYKSVKVVITDANEESISHSIFYTAITRARERLEVFWTPETQQRILSRLAVRENMKDENLL
RVRRGVIPIAKRPKRQKTRQQP

Specific function: Unknown

COG id: COG0507

COG function: function code L; ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 102965; Mature: 102965

Theoretical pI: Translated: 6.77; Mature: 6.77

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MICQNIAIPVGDRGFLSQNVLGQLRNLVEGLIVWAHLSDRVTEFHYNQVGPALDAVKATA
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHEEHHHHHHHHHHHHHHHHCHHHHHHHHHH
KFRLLSRFHDLLQASVSHYTLDRDPSERLMLKYYEYLLRTRDLAQAQFGITILNNIEQFP
HHHHHHHHHHHHHHHHHHEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCHHHCCCCHHCC
IDLDPSLRDYYEKIAACIEQKRATPPSTARRERYYIHSSRPFFTGGRIYYEVTFYLAHNR
CCCCCCHHHHHHHHHHHHHHHCCCCCCCHHCCEEEEECCCCEEECCEEEEEEEEEEECCC
TSKFDRIIGFTDIDLTNKYAAYLGLASDTIEVLGQTMPIMLIRSWDVSIRPCEFDNFARF
CCHHHHHCCCEECCCCCHHHHHHCCCHHHHHHHCCCCCEEEEEECCCEEECCCCHHHHHH
FEVSHDRVSTSHSEYRNLMQYLTSMRSSLLDLVDMTDASYGRVRARTLDGAQRSPLIFPV
HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCEEEHH
LDRARTLIRENRPGARLMRYLMLRMNNRVIKDQFDSDECTGLSQLRVSWSCKPFDTMPFC
HHHHHHHHHCCCCHHHHHHHHHHHHCCCEECCCCCCCCCCCHHHEEEEECCCCCCCCCCC
TSPRRHNPHFSDLAESLDARSRPHELLARRVRSNVDQHGMIYTPESDLADFGDIDKLIAR
CCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCEEECCCCCCCHHCHHHHHHHH
HNQLLPTNARHAPRKLVHANGHVFIVGYEDDTAAIIEKLQAIAAGGVPNHSSDVQAWINA
CCCCCCCCCCCCCHHHEECCCEEEEEEECCCHHHHHHHHHHHHCCCCCCCCCCEEEEECC
NPGVIDDPLKAEALTELFEHSNVALVYGAAGTGKSTMLNHIANYFDGERKLFLAHTNPAV
CCCCCCCCHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHCCCCCEEEEEECCCHH
DNLRRRVQAPNSEFSTISKHLRSSTPFDGTYDVLVIDECSTVGNASLLEVLQNTSFDLLV
HHHHHHHCCCCCHHHHHHHHHHCCCCCCCCEEEEEEECCCCCCCHHHHHHHHCCCCEEEE
LVGDVYQIESIEFGNWFSTIRSYIPSESVFELTKPFRTTDQALLTLWDRVRNLDDRIEES
EECCCEEEEEEECCHHHHHHHHHCCCHHHHHHHCCCCCHHHHHHHHHHHHHCHHHHHHHH
LSKNGYSTVLGDSLFQRRSDDEIVLCLNYDGLYGINNVNRFLQAGNPNPAVTWSESTYKV
HHCCCCHHHHHHHHHHCCCCCCEEEEEECCCCCCCHHHHHHHHCCCCCCCEEECCCCEEC
GDPVLFNESDRFRPVIFNNLKGQIVKIDRARGRITFDVNLETDVTPADVFGTDLRWVEGT
CCCEEECCCCCCCCEEECCCCCEEEEEECCCCEEEEEEECCCCCCCHHHCCCCCEEECCC
TVQFDVFERGNSDDDDDTVITMVPFQIAYAVSIHKAQGLEYKSVKVVITDANEESISHSI
EEEEEEEECCCCCCCCCEEEEEECCEEEHHEEEHHHCCCCCCEEEEEEECCCCHHHHHHH
FYTAITRARERLEVFWTPETQQRILSRLAVRENMKDENLLRVRRGVIPIAKRPKRQKTRQ
HHHHHHHHHHCEEEEECCCHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCHHHHCC
QP
CC
>Mature Secondary Structure
MICQNIAIPVGDRGFLSQNVLGQLRNLVEGLIVWAHLSDRVTEFHYNQVGPALDAVKATA
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHEEHHHHHHHHHHHHHHHHCHHHHHHHHHH
KFRLLSRFHDLLQASVSHYTLDRDPSERLMLKYYEYLLRTRDLAQAQFGITILNNIEQFP
HHHHHHHHHHHHHHHHHHEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCHHHCCCCHHCC
IDLDPSLRDYYEKIAACIEQKRATPPSTARRERYYIHSSRPFFTGGRIYYEVTFYLAHNR
CCCCCCHHHHHHHHHHHHHHHCCCCCCCHHCCEEEEECCCCEEECCEEEEEEEEEEECCC
TSKFDRIIGFTDIDLTNKYAAYLGLASDTIEVLGQTMPIMLIRSWDVSIRPCEFDNFARF
CCHHHHHCCCEECCCCCHHHHHHCCCHHHHHHHCCCCCEEEEEECCCEEECCCCHHHHHH
FEVSHDRVSTSHSEYRNLMQYLTSMRSSLLDLVDMTDASYGRVRARTLDGAQRSPLIFPV
HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCEEEHH
LDRARTLIRENRPGARLMRYLMLRMNNRVIKDQFDSDECTGLSQLRVSWSCKPFDTMPFC
HHHHHHHHHCCCCHHHHHHHHHHHHCCCEECCCCCCCCCCCHHHEEEEECCCCCCCCCCC
TSPRRHNPHFSDLAESLDARSRPHELLARRVRSNVDQHGMIYTPESDLADFGDIDKLIAR
CCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCEEECCCCCCCHHCHHHHHHHH
HNQLLPTNARHAPRKLVHANGHVFIVGYEDDTAAIIEKLQAIAAGGVPNHSSDVQAWINA
CCCCCCCCCCCCCHHHEECCCEEEEEEECCCHHHHHHHHHHHHCCCCCCCCCCEEEEECC
NPGVIDDPLKAEALTELFEHSNVALVYGAAGTGKSTMLNHIANYFDGERKLFLAHTNPAV
CCCCCCCCHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHCCCCCEEEEEECCCHH
DNLRRRVQAPNSEFSTISKHLRSSTPFDGTYDVLVIDECSTVGNASLLEVLQNTSFDLLV
HHHHHHHCCCCCHHHHHHHHHHCCCCCCCCEEEEEEECCCCCCCHHHHHHHHCCCCEEEE
LVGDVYQIESIEFGNWFSTIRSYIPSESVFELTKPFRTTDQALLTLWDRVRNLDDRIEES
EECCCEEEEEEECCHHHHHHHHHCCCHHHHHHHCCCCCHHHHHHHHHHHHHCHHHHHHHH
LSKNGYSTVLGDSLFQRRSDDEIVLCLNYDGLYGINNVNRFLQAGNPNPAVTWSESTYKV
HHCCCCHHHHHHHHHHCCCCCCEEEEEECCCCCCCHHHHHHHHCCCCCCCEEECCCCEEC
GDPVLFNESDRFRPVIFNNLKGQIVKIDRARGRITFDVNLETDVTPADVFGTDLRWVEGT
CCCEEECCCCCCCCEEECCCCCEEEEEECCCCEEEEEEECCCCCCCHHHCCCCCEEECCC
TVQFDVFERGNSDDDDDTVITMVPFQIAYAVSIHKAQGLEYKSVKVVITDANEESISHSI
EEEEEEEECCCCCCCCCEEEEEECCEEEHHEEEHHHCCCCCCEEEEEEECCCCHHHHHHH
FYTAITRARERLEVFWTPETQQRILSRLAVRENMKDENLLRVRRGVIPIAKRPKRQKTRQ
HHHHHHHHHHCEEEEECCCHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCHHHHCC
QP
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA