Definition Frankia sp. EAN1pec chromosome, complete genome.
Accession NC_009921
Length 8,982,042

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The map label for this gene is 158314414

Identifier: 158314414

GI number: 158314414

Start: 3064970

End: 3065419

Strand: Direct

Name: 158314414

Synonym: Franean1_2586

Alternate gene names: NA

Gene position: 3064970-3065419 (Clockwise)

Preceding gene: 158314412

Following gene: 158314417

Centisome position: 34.12

GC content: 69.11

Gene sequence:

>450_bases
GTGACAGGGATTGACGATCTGTCTGGTCCTGATCGGCGCATTCTGCTGCACGATCTGCGGCGCACGCTGAGTCCCGGCTG
GCTGCCGGACGTGCTGGTCGCGTTGTCGAGCGGGCCGCTGCCGTATACGGGCTTGTTGCGCACGCTGCGCAGCTATGAGG
TTCCGCGGGGTCGGCGCTGGCCGCAGCCACTCATCCAGGAAGCCGTGTTGACCCGGACATTGCGGTGGATGCAGCGCCGG
GGGCTGGTCGAGCGTGCACGGGAGCGCGTGTTCCCCTTCGGGACGGTCTACTGGTTGACACCGGCGGCGAAGGAGTTGGC
GGATCTGGTCGTGCCGATGGCGCAGTGGGCGGCGGCGCATGAGGATCTGTTGGAGGTGGATCGGCGGGAGTGGGCCGAGC
GGCGGCGCCGCAGGAACAGCGGCGGCAGCCGTCGACCGCGGTCAGGCTGA

Upstream 100 bases:

>100_bases
AGAGGGGCTACGGGGGCGTCGGAGGCGGCGAGGCAGGCGCGCTGCGCGGCGGAACGGTCAAGCAGGCCCGGTGGTTCTGC
GGATCTTCCGTGGGAGTGGT

Downstream 100 bases:

>100_bases
ACGCGCGCCGGGCGGTCCAGGCCGCATCACGGCCTGGAAGACGCGATCGGTGTCGGCGGTGGGGTGCTCGCCGACCTCGG
CGAGGGCCGCGACCAGCTGG

Product: HxlR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 149; Mature: 148

Protein sequence:

>149_residues
MTGIDDLSGPDRRILLHDLRRTLSPGWLPDVLVALSSGPLPYTGLLRTLRSYEVPRGRRWPQPLIQEAVLTRTLRWMQRR
GLVERARERVFPFGTVYWLTPAAKELADLVVPMAQWAAAHEDLLEVDRREWAERRRRRNSGGSRRPRSG

Sequences:

>Translated_149_residues
MTGIDDLSGPDRRILLHDLRRTLSPGWLPDVLVALSSGPLPYTGLLRTLRSYEVPRGRRWPQPLIQEAVLTRTLRWMQRR
GLVERARERVFPFGTVYWLTPAAKELADLVVPMAQWAAAHEDLLEVDRREWAERRRRRNSGGSRRPRSG
>Mature_148_residues
TGIDDLSGPDRRILLHDLRRTLSPGWLPDVLVALSSGPLPYTGLLRTLRSYEVPRGRRWPQPLIQEAVLTRTLRWMQRRG
LVERARERVFPFGTVYWLTPAAKELADLVVPMAQWAAAHEDLLEVDRREWAERRRRRNSGGSRRPRSG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17273; Mature: 17142

Theoretical pI: Translated: 11.89; Mature: 11.89

Prosite motif: PS51118 HTH_HXLR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTGIDDLSGPDRRILLHDLRRTLSPGWLPDVLVALSSGPLPYTGLLRTLRSYEVPRGRRW
CCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCC
PQPLIQEAVLTRTLRWMQRRGLVERARERVFPFGTVYWLTPAAKELADLVVPMAQWAAAH
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCHHHHHHHHHHHHHHHHHHHH
EDLLEVDRREWAERRRRRNSGGSRRPRSG
HHHHHHHHHHHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure 
TGIDDLSGPDRRILLHDLRRTLSPGWLPDVLVALSSGPLPYTGLLRTLRSYEVPRGRRW
CCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCC
PQPLIQEAVLTRTLRWMQRRGLVERARERVFPFGTVYWLTPAAKELADLVVPMAQWAAAH
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCHHHHHHHHHHHHHHHHHHHH
EDLLEVDRREWAERRRRRNSGGSRRPRSG
HHHHHHHHHHHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA